FFCP PHASE1:Hg19::chr14:93581615..93581637,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6177 | |||
|TSSclassifier=strong | |||
|UniProt=G3V3C0,G3V4M9,G3V5A3 | |||
|association_with_transcript=0bp_to_ENST00000554999,ENST00000555495,ENST00000555553_5end | |||
|description=CAGE_peak_2_at_ITPK1_5end | |||
|id=chr14:93581615..93581637,- | |||
|ontology_enrichment_celltype=CL:0000860!6.42e-10!45;CL:0000766!5.10e-09!76;CL:0002057!5.15e-09!42;CL:0002194!8.98e-07!63;CL:0000576!8.98e-07!63;CL:0000040!8.98e-07!63;CL:0000559!8.98e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.97e-09,42;CL:0002057,4.97e-09,42;CL:0000766,1.21e-08,72;CL:0000473,1.13e-07,48;CL:0000234,1.13e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.06e-25!115;UBERON:0001049!8.87e-16!57;UBERON:0005068!8.87e-16!57;UBERON:0006241!8.87e-16!57;UBERON:0007135!8.87e-16!57;UBERON:0003080!5.57e-12!42;UBERON:0002780!5.94e-12!41;UBERON:0001890!5.94e-12!41;UBERON:0006240!5.94e-12!41;UBERON:0001893!6.82e-12!34;UBERON:0002020!1.27e-11!34;UBERON:0003528!1.27e-11!34;UBERON:0002791!2.03e-11!33;UBERON:0002616!5.15e-11!59;UBERON:0001869!6.87e-11!32;UBERON:0003075!1.38e-09!86;UBERON:0007284!1.38e-09!86;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0001017!2.72e-09!82;UBERON:0002346!2.91e-09!90;UBERON:0005743!3.03e-09!86;UBERON:0000073!1.01e-08!94;UBERON:0001016!1.01e-08!94;UBERON:0000956!1.09e-08!25;UBERON:0000203!1.09e-08!25;UBERON:0001950!2.70e-08!20;UBERON:0002619!3.24e-08!22;UBERON:0002390!1.03e-07!102;UBERON:0003061!1.03e-07!102;UBERON:0000178!6.46e-07!15;UBERON:0000179!6.46e-07!15;UBERON:0000463!6.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.03e-10;34!UBERON:0002791;6.49e-10;32!UBERON:0001869;6.88e-10;32!UBERON:0003528;8.65e-10;34!UBERON:0002020;8.65e-10;34!UBERON:0002780;6.45e-09;41!UBERON:0001890;6.45e-09;41!UBERON:0000073;1.17e-08;53!UBERON:0002616;1.17e-08;53!UBERON:0000956;1.20e-08;25!UBERON:0000203;1.20e-08;25!UBERON:0001950;3.81e-08;20!UBERON:0002619;4.02e-08;22!UBERON:0000178;5.53e-07;15!UBERON:0000179;5.53e-07;15!UBERON:0000463;5.53e-07;15!UBERON:0007023;7.01e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.50e-24,114;UBERON:0001049,9.40e-16,56;UBERON:0005068,9.40e-16,56;UBERON:0006241,9.40e-16,56;UBERON:0007135,9.40e-16,56;UBERON:0000073,5.68e-15,53;UBERON:0002616,5.68e-15,53;UBERON:0002780,5.93e-12,41;UBERON:0001890,5.93e-12,41;UBERON:0003080,5.93e-12,41;UBERON:0006240,5.93e-12,41;UBERON:0001893,6.50e-12,34;UBERON:0003528,1.21e-11,34;UBERON:0002020,1.21e-11,34;UBERON:0010371,5.78e-11,104;UBERON:0002791,6.50e-11,32;UBERON:0001869,6.58e-11,32;UBERON:0000955,1.40e-09,68;UBERON:0006238,1.40e-09,68;UBERON:0003075,2.48e-09,82;UBERON:0007284,2.48e-09,82;UBERON:0001017,2.80e-09,81;UBERON:0002346,5.30e-09,86;UBERON:0000956,1.05e-08,25;UBERON:0000203,1.05e-08,25;UBERON:0001016,1.12e-08,89;UBERON:0001950,2.62e-08,20;UBERON:0002619,3.14e-08,22;UBERON:0002390,2.11e-07,98;UBERON:0003061,2.11e-07,98;UBERON:0000178,6.30e-07,15;UBERON:0000179,6.30e-07,15;UBERON:0000463,6.30e-07,15 | |||
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| |||
|short_description=p2@ITPK1 | |||
}} |
Revision as of 21:37, 11 January 2014
Short description: | p2@ITPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITPK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554999, ENST00000555495, ENST00000555553_5end |
EntrezGene: | ITPK1 |
HGNC: | 6177 |
UniProt: | G3V3C0G3V4M9G3V5A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.97e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.97e-09 | 42 |
myeloid leukocyte | 1.21e-08 | 72 |
defensive cell | 1.13e-07 | 48 |
phagocyte | 1.13e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.50e-24 | 114 |
neural tube | 9.40e-16 | 56 |
neural rod | 9.40e-16 | 56 |
future spinal cord | 9.40e-16 | 56 |
neural keel | 9.40e-16 | 56 |
regional part of nervous system | 5.68e-15 | 53 |
regional part of brain | 5.68e-15 | 53 |
regional part of forebrain | 5.93e-12 | 41 |
forebrain | 5.93e-12 | 41 |
anterior neural tube | 5.93e-12 | 41 |
future forebrain | 5.93e-12 | 41 |
telencephalon | 6.50e-12 | 34 |
brain grey matter | 1.21e-11 | 34 |
gray matter | 1.21e-11 | 34 |
ecto-epithelium | 5.78e-11 | 104 |
regional part of telencephalon | 6.50e-11 | 32 |
cerebral hemisphere | 6.58e-11 | 32 |
brain | 1.40e-09 | 68 |
future brain | 1.40e-09 | 68 |
neural plate | 2.48e-09 | 82 |
presumptive neural plate | 2.48e-09 | 82 |
central nervous system | 2.80e-09 | 81 |
neurectoderm | 5.30e-09 | 86 |
cerebral cortex | 1.05e-08 | 25 |
pallium | 1.05e-08 | 25 |
nervous system | 1.12e-08 | 89 |
neocortex | 2.62e-08 | 20 |
regional part of cerebral cortex | 3.14e-08 | 22 |
hematopoietic system | 2.11e-07 | 98 |
blood island | 2.11e-07 | 98 |
blood | 6.30e-07 | 15 |
haemolymphatic fluid | 6.30e-07 | 15 |
organism substance | 6.30e-07 | 15 |