FFCP PHASE1:Hg19::chr14:91294493..91294523,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000555975_5end | |||
|description=CAGE_peak_1_at_ENST00000555975_5end | |||
|id=chr14:91294493..91294523,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.43e-13;5!CL:0002567;2.98e-12;3!CL:0002535;3.02e-09;2!CL:0002681;4.50e-08;12!CL:0002584;4.50e-08;12!CL:0002188;7.92e-08;5!CL:0000163;2.39e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.52e-13,5;CL:0002028,2.52e-13,5;CL:0002567,2.94e-12,3;CL:0002535,5.70e-09,2;CL:0002681,5.20e-08,12;CL:0002584,5.20e-08,12;CL:0002188,7.96e-08,5;CL:0000163,2.02e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.17e-07!106;DOID:0050687!5.56e-07!143;DOID:162!7.88e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.84e-10;4!DOID:1612;7.84e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.89e-10,4;DOID:1612,6.89e-10,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.02e-09;2!UBERON:0004801;3.02e-09;2!UBERON:0001851;4.57e-09;15!UBERON:0001225;4.50e-08;12!UBERON:0008987;4.50e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,5.50e-09,15;UBERON:0006955,5.70e-09,2;UBERON:0004801,5.70e-09,2;UBERON:0001225,5.20e-08,12;UBERON:0008987,5.20e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.491467873003018,1.39560233594486,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0.786728553697808,0,0,0,0.30120591877825,0.369754010166788,0.232401601740905,0,0.293600439334847,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.411202997999018,0,0,0.473447805734733,0,0.668462741311041,0.294605907474837,0.221533894583621,0,0.384273959177026,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.916853528483988,0.728590576585084,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0.732186172644509,0,0,0.357198913136319,0.898117490504679,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0.750711119231785,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0.365921118388786,0,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.402115889646523,0.0925884451585296,0,1.03993478527958,0,0,0,1.58803092537181,0.925971025153221,0.951270761172991,2.37061319387782,2.57545848628462,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0,0.179117045405697,0,0,1.47798971368783,0.44024217006613,2.28060927094849,1.29707958075265,2.65109110195398,0.888970520090367,1.14596527667483,1.17217447210047,1.71072446022705,0.411309970813294,0.901029173531752,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13838403181876,0.591092280605782,0.862510299438069,0.898401253958239,0.254094624222463,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0.364182336013434,0,0,0.462092022626489,0,0,0.105551628892876,1.13733384070897,0,0,4.62681758070868,0.812839312631559,0,1.01950509218015,0,1.34324852833307,0.438519753291869,1.0457418040996,0.512900250232778,0,0,0.412164046590889,0.0915694648183434,0.41254749960294,0.574265537996172,0,0,0,0.154048617114644,0,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0.190630193923825,0.511795582622668,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,1.06428319221179,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0.28853842595289,0.213425530045242,0.637705090915289,1.59663497146253,0.191505370132367,0.211673582723883,1.29848776109822,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.834245708559542,0.586164286206121,0,0,0.811367035427949,0,0,0,0.293016358543788,2.06312886974173,2.34031106982705,0.284136146806413,0,0.593929361665277,0,0,0.281338832821026,0,0.824019371133798,0,0.597743964753209,0.276283915531148,1.0077309914171,0.306806047506464,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,0,1.30213880542617,0.262379999988587,0,0.341380344856499,0.254253650292766,0.236387681767936,0,0,0.868124974666461,0,0.241192877250816,3.05163472634166,0.774054819518572,0.886642856860642,0.219385397153973,0.435753854075961,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0.498635045700469,0,0.19606253431774,0.503464760927528,0.37950746544837,0.158936578980379,0.421996129056054,0.489698424477443,0.706765357169704,0,0,0.176915129006678,0,6.8199859596543,1.97702302314405,1.25306339406546,0.404406797884062,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.252746318513952,11.8755501337449,0.311064574191741,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0.173559738335131,0,4.61413794876134,0.17472666824203,0.343972064943233,0.19351266257817,0,0,0,0.0882561266915003,0.451961481561065,0.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| |||
|short_description=p1@ENST00000555975 | |||
}} |
Revision as of 21:28, 11 January 2014
Short description: | p1@ENST00000555975 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000555975_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000555975_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.52e-13 | 5 |
basophil mast progenitor cell | 2.52e-13 | 5 |
light melanocyte | 2.94e-12 | 3 |
epithelial cell of cervix | 5.70e-09 | 2 |
kidney cortical cell | 5.20e-08 | 12 |
renal cortical epithelial cell | 5.20e-08 | 12 |
glomerular endothelial cell | 7.96e-08 | 5 |
endocrine cell | 2.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cortex | 5.50e-09 | 15 |
uterine epithelium | 5.70e-09 | 2 |
cervix epithelium | 5.70e-09 | 2 |
cortex of kidney | 5.20e-08 | 12 |
renal parenchyma | 5.20e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.89e-10 | 4 |
breast cancer | 6.89e-10 | 4 |