FFCP PHASE1:Hg19::chr14:81687057..81687090,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4646 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=175bp_to_ENST00000553612_5end | |||
|description=CAGE_peak_3_at_GTF2A1_5end | |||
|id=chr14:81687057..81687090,- | |||
|ontology_enrichment_celltype=CL:0002031!1.21e-12!124;CL:0002057!1.28e-12!42;CL:0000860!2.40e-12!45;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0000037!1.88e-11!172;CL:0000566!1.88e-11!172;CL:0002087!3.14e-11!119;CL:0000988!1.08e-10!182;CL:0000839!1.23e-10!70;CL:0000738!1.34e-10!140;CL:0000557!2.30e-10!71;CL:0000766!1.69e-09!76;CL:0002194!1.97e-09!63;CL:0000576!1.97e-09!63;CL:0000040!1.97e-09!63;CL:0000559!1.97e-09!63;CL:0002009!2.89e-09!65;CL:0000763!1.11e-08!112;CL:0000049!1.11e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-13;33!CL:0002057;1.41e-13;33!CL:0000473;1.05e-09;39!CL:0000234;1.05e-09;39!CL:0000576;3.61e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.09e-13,120;CL:0000860,1.35e-12,42;CL:0002057,1.35e-12,42;CL:0002032,8.08e-12,161;CL:0000837,8.08e-12,161;CL:0000037,1.41e-11,168;CL:0002087,1.94e-11,115;CL:0000988,3.35e-11,177;CL:0000839,4.89e-11,66;CL:0000738,9.30e-11,136;CL:0000557,9.54e-11,67;CL:0000473,1.01e-10,48;CL:0000234,1.01e-10,48;CL:0002194,7.99e-10,59;CL:0000576,7.99e-10,59;CL:0000040,7.99e-10,59;CL:0000559,7.99e-10,59;CL:0000766,8.04e-10,72;CL:0002009,1.24e-09,61;CL:0000763,7.50e-09,108;CL:0000049,7.50e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-10!102;UBERON:0003061!1.10e-10!102;UBERON:0001474!1.47e-10!86;UBERON:0002371!8.01e-10!80;UBERON:0002193!1.44e-08!112;UBERON:0004765!7.55e-08!101;UBERON:0001434!7.55e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-11,98;UBERON:0003061,6.13e-11,98;UBERON:0001474,7.30e-11,82;UBERON:0002371,3.97e-10,76;UBERON:0004765,1.43e-09,90;UBERON:0002193,9.83e-09,108;UBERON:0002405,1.52e-08,93;UBERON:0001434,4.07e-08,100;UBERON:0001016,5.54e-07,89 | |||
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| |||
|short_description=p3@GTF2A1 | |||
}} |
Revision as of 21:18, 11 January 2014
Short description: | p3@GTF2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GTF2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_ENST00000553612_5end |
EntrezGene: | GTF2A1 |
HGNC: | 4646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 7.09e-13 | 120 |
classical monocyte | 1.35e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-12 | 42 |
hematopoietic oligopotent progenitor cell | 8.08e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.08e-12 | 161 |
hematopoietic stem cell | 1.41e-11 | 168 |
nongranular leukocyte | 1.94e-11 | 115 |
hematopoietic cell | 3.35e-11 | 177 |
myeloid lineage restricted progenitor cell | 4.89e-11 | 66 |
leukocyte | 9.30e-11 | 136 |
granulocyte monocyte progenitor cell | 9.54e-11 | 67 |
defensive cell | 1.01e-10 | 48 |
phagocyte | 1.01e-10 | 48 |
monopoietic cell | 7.99e-10 | 59 |
monocyte | 7.99e-10 | 59 |
monoblast | 7.99e-10 | 59 |
promonocyte | 7.99e-10 | 59 |
myeloid leukocyte | 8.04e-10 | 72 |
macrophage dendritic cell progenitor | 1.24e-09 | 61 |
myeloid cell | 7.50e-09 | 108 |
common myeloid progenitor | 7.50e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-11 | 98 |
blood island | 6.13e-11 | 98 |
bone element | 7.30e-11 | 82 |
bone marrow | 3.97e-10 | 76 |
skeletal element | 1.43e-09 | 90 |
hemolymphoid system | 9.83e-09 | 108 |
immune system | 1.52e-08 | 93 |
skeletal system | 4.07e-08 | 100 |
nervous system | 5.54e-07 | 89 |