FFCP PHASE1:Hg19::chr14:73525265..73525286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58517 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23244 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000526754_5end | |||
|coexpression_cluster_id=C1724 | |||
|description=CAGE_peak_2_at_RBM25_5end | |||
|id=chr14:73525265..73525286,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.72e-22!172;CL:0000566!2.72e-22!172;CL:0002032!3.43e-21!165;CL:0000837!3.43e-21!165;CL:0000988!4.03e-20!182;CL:0000738!3.33e-15!140;CL:0000763!3.13e-13!112;CL:0000049!3.13e-13!112;CL:0002031!4.39e-13!124;CL:0002087!9.07e-13!119;CL:0000860!5.55e-10!45;CL:0002057!5.20e-09!42;CL:0000542!5.49e-08!53;CL:0000051!5.49e-08!53;CL:0000838!1.49e-07!52;CL:0000766!5.13e-07!76;CL:0000557!8.19e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-09;33!CL:0002057;1.15e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.25e-21,168;CL:0002032,1.53e-20,161;CL:0000837,1.53e-20,161;CL:0000988,4.63e-20,177;CL:0000738,1.29e-14,136;CL:0000763,1.15e-12,108;CL:0000049,1.15e-12,108;CL:0002031,1.61e-12,120;CL:0002087,3.31e-12,115;CL:0000860,5.20e-09,42;CL:0002057,5.20e-09,42;CL:0000542,5.49e-08,53;CL:0000051,5.49e-08,53;CL:0000838,1.49e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-07;42 | |||
|ontology_enrichment_disease=DOID:162!3.57e-22!235;DOID:14566!7.10e-21!239;DOID:0050686!4.13e-13!137;DOID:0050687!1.11e-11!143;DOID:2531!1.48e-11!51;DOID:0060083!1.48e-11!51;DOID:305!2.90e-10!106;DOID:1240!5.64e-10!39;DOID:8692!4.12e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.91e-08;39!DOID:8692;1.02e-07;31!DOID:2531;2.53e-07;51!DOID:0060083;2.53e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.57e-22,235;DOID:14566,7.10e-21,239;DOID:0050686,4.13e-13,137;DOID:0050687,1.11e-11,143;DOID:2531,1.48e-11,51;DOID:0060083,1.48e-11,51;DOID:305,2.90e-10,106;DOID:1240,5.64e-10,39;DOID:8692,4.12e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=7.81217030863394,9.42042305120326,10.4306259031019,7.00513088471913,8.04529969969118,2.61701557230111,2.53299878168311,8.2123583545488,3.91778442299758,3.68600904752263,7.6758128476967,7.64544802455603,5.01157258634062,4.70312141248177,3.64537113300707,6.05092631806598,12.0538905604795,7.30310090387373,6.8310591830671,5.78668972960903,4.08001382488506,2.82109249330279,18.8915751506497,16.2880565836732,14.5629461929971,20.2495525232071,24.6301768349837,23.6919451754175,11.4075640286182,24.5650814782216,12.8497382352343,7.35536979583142,4.2168828628955,3.32778609150109,43.923902729031,33.1254311695692,15.2672228454121,24.3757979754026,33.8920116224539,26.0413044859022,8.50878802111712,8.74512898251245,9.78787157009909,14.8306203555156,27.5849438892831,27.8971670365989,18.5943229524548,25.0812411693314,28.1832797514544,17.8369283239733,21.2613386419154,21.5198829198613,16.2030469946211,33.565203546359,28.4395621848118,21.0831420287717,21.0137735544541,20.8992840533929,24.7927952820431,23.4278189765548,27.4914964093588,19.4612267110163,18.3506565011901,23.0161365287655,17.1223450790865,27.2344907851747,28.6498234537965,21.8586338773367,18.7733850631273,29.9720605693061,16.9511860737343,32.0401543309181,30.063926806884,14.365359469212,9.35458919846192,9.43463904787692,12.8054639507004,10.2120287132224,17.6798145366788,5.70025487482497,9.34908382835724,8.58521522693779,7.03984977845291,10.3766336139805,12.4531295540898,14.5088275672612,10.4102956629363,11.4950487990897,11.2377628373427,14.3108063180305,28.4606484554724,31.7108082260307,26.759125968766,10.5737062863221,36.9935651567814,20.543958612456,33.6373706894655,29.4758072061874,28.7842098599313,7.52339229258051,16.2961133316795,14.6768819777767,11.6896037044747,10.3611724903211,14.7302953737419,10.6336269400138,17.060643417196,5.63601806792971,5.85267064019452,7.39970570716543,9.119550586933,16.518775886898,22.9844172901194,25.6839194966125,18.8163942848958,13.2571930956152,14.1791582632711,14.7759801557531,20.7476147455992,10.1940932583711,13.0216690771284,12.3558765778289,14.0034860742329,10.1109422811991,2.49861453104692,10.4181990899367,9.03240796613151,35.4827868075529,37.441627409691,35.9164521629341,9.75227465255847,2.68280343881454,5.37022759742827,3.2529523714611,4.51204119572301,5.64901423947212,13.5198610998687,7.29952305453954,17.7725456268448,16.6297048096923,14.5805744250589,10.2818574265704,1.45718115317017,7.04490441290416,5.19275829847493,6.09454080547435,9.44001519683943,13.3554749610991,10.2959083940423,11.8866400425461,3.57772333260069,5.16140757063675,8.33137203858226,5.6530794192401,8.80948816040802,9.90424950984243,5.64286409649389,16.0218390684984,12.8075854567216,18.4096337020569,8.86224497640123,11.4040815857777,4.14905497831888,26.4717417849025,13.7724131139899,21.6998339730314,14.1453504754487,13.288154697032,7.66583187329416,5.69559395740877,7.69447324507711,30.3094960102945,31.022421131866,3.48875241714027,4.47274756525787,12.5364206547934,35.088432915503,21.2259099354122,8.15737279056221,10.0921968025615,6.4049397437823,5.67335361359468,10.2699641681923,9.69916838901754,8.82694276812677,4.54072282934794,11.5235184896,4.92075006850973,4.68240115245481,5.13424639390004,8.36912611090086,11.0388428725139,9.87424960645602,13.7641790568204,10.6160169052544,9.70391106762967,8.26606249406124,10.6920257155385,6.67620709052104,1.82032272387605,4.31170885089743,12.1202002046928,11.8862593878366,16.3467828135668,8.34057479673592,5.82326812018137,4.8076178850111,8.05368500436149,29.7786795243511,8.96941033037983,13.3517097730524,23.7071965906678,14.8395642103352,16.2313540228746,6.32797311527405,29.1983054777391,11.5950036141826,21.2044370365056,10.4016385465798,11.8001621477733,16.3304412557643,10.1759619209917,9.15627198476633,8.69673839234836,12.8190676677692,15.7742527463952,27.2001364668998,32.8673825437283,25.562667431294,18.9699730678128,24.2228016840603,40.877464216493,4.69348596989448,7.71889125831462,8.28809528114883,8.35862270457562,2.16563844500876,16.2080316054586,21.4102556399189,24.5831250481152,16.8749778280563,21.5700649651482,21.3543557199987,12.8089742752156,17.2674889310305,17.698369219534,4.42893272774789,9.81692416624121,2.4694440679884,5.88034845542168,20.2808055714929,13.7595810334868,12.4065880403095,31.3438800584402,19.3091848512688,10.122500807613,14.8162885301645,2.24803506515239,10.1534262135747,7.12931027720678,6.19035780089617,3.11980435583874,10.1031939417691,7.88326753830522,7.74897381956423,5.63029146268188,8.33373922637899,11.9860115907797,5.53143078571493,5.15091697256924,8.37137820697151,8.19014927987332,8.62060741274624,3.74935335947108,19.9898732556643,16.5876863773592,13.3442198827244,13.0785272331283,3.83382679165211,142.872338989824,11.3582479877062,16.7935773588025,15.5649549690318,12.624243342638,14.5410177929067,3.81988425558278,4.68869788840188,10.2643467613623,13.0590915733221,12.6144084294445,12.862189468376,7.73704481982989,3.92364061949952,16.3544377380719,12.4100847127467,3.57656445851882,6.762422020448,7.97814349754611,4.16029747645464,6.68739173081569,4.25547396069835,5.06202140130589,7.00592168924923,4.34097284313154,5.76268235746538,8.79487697593085,7.10783897485092,6.33561498346743,7.53598442648965,9.58686804460323,10.497164074116,2.43247561282381,7.5338563714819,6.32501818449095,10.7831184971212,11.4861935834114,14.2636905040718,15.9259437334337,11.5066740628215,11.6389626105932,18.6061339029255,31.5249216323084,30.4034880551919,30.9306717434194,42.6878968693739,27.3293693101006,9.27946575333234,15.0764638800914,15.9484687913291,18.7251755986796,14.9580729602012,21.5496066986738,4.66227668532732,4.00136416847742,4.06897535549603,6.03115498439341,10.1704523614382,7.254311091561,7.26276772954822,1.80567659836631,2.27407504055985,5.17365356462525,23.2478959487403,5.16233671916769,9.03589590468062,2.74121620447837,1.71571711905428,19.8497305077972,21.1399916802245,21.2387840028854,6.06255142892519,6.65741758041988,5.14063498660456,11.4129591596637,23.4796819130736,5.89386198309454,8.58532300013196,11.2575594794675,7.39928037260594,2.96836132889982,13.1078239732257,8.5229628150301,11.8263104659885,11.9428518712233,10.6913548183163,21.8755603760836,12.2308946885004,6.99815515912812,8.4962691641809,8.92246723232913,6.03172308813351,2.25599806453706,10.7051318575137,3.13739907670742,7.30696123266303,12.3495405804665,6.8240030442538,3.74206151608334,12.9549549661284,3.08454505380579,4.6060894382455,3.51182841698397,7.64628819135115,3.3243040357149,4.47749509444357,17.7600500083207,13.071772551245,8.46285412884084,5.9042636225947,10.4121086292577,14.837905677272,15.1089616950267,21.2049414795911,6.89118645595407,6.50060246036521,9.64103579064957,7.73365746336976,10.9374518151398,12.7408050022688,12.5431280960923,14.5017330572169,8.99103502268217,13.7214870139922,13.6219014539508,11.9005139059904,12.4923543787319,40.9636807107615,7.89030690673289,0.929691098594572,21.7220519313142,3.485186350803,7.39280592422613,2.12922412126809,5.21959795245044,5.5597265731176,7.72874388406753,11.16475108079,14.5534535370614,9.72213989011507,1.535386747868,4.70732886837312,3.81843897511124,3.13979456079692,13.3105618611653,8.23611089208164,8.83593017592648,6.67202189191943,4.75530963519025,6.7401352998237,1.46290121726877,9.99225307488266,6.33900880540533,7.91699486166317,9.19135307699133,1.13008116620243,5.51365343546124,11.2784625791007,7.89211593456773,2.89387767133344,7.21484227251296,3.65238678532867,8.0554109505935,1.97186921772569,11.6163195285282,4.61770492761669,3.92338156629375,6.03093808920016,4.01104507065562,3.95153871551882,2.27683904259429,8.04849856563461,5.19599408717765,2.68120910214315,2.17781969722645,15.8161585304989,2.15252686335615,1.68471475667626,2.66058092122005,5.05391480455311,9.13405696617905,9.94028369285088,4.5571774973933,10.4821981201427,13.1635927387582,11.0240462902762,5.94034580961926,5.55187623405989,20.6170457276023,17.3246373947405,12.0069705830706,34.7451937485094,23.660150928137,32.0138295067864,25.8270561820692,27.5419532577287,15.8949457209864,23.495767682351,25.3205113414153,21.6213827147363,18.7152436807218,11.5943122872037,32.5824820217087,20.1457215583908,28.1029131431474,26.4357616420272,29.3833904006325,15.8012458587652,21.5068535015921,22.8149630050264,25.1942203984982,24.228123829853,26.1701803461528,19.693983831634,19.4728088502708,32.6410528637864,16.9184406105419,13.4741189093918,9.96255619048879,17.1118335666814,8.91547074219827,17.6164411019976,9.5497793895076,5.93929361665277,8.90766036087773,11.9297717731956,12.0975698113041,6.34459618630564,15.1619564288619,47.0809660125425,6.97367958878744,24.8655523978033,17.1314268540908,17.8970194378771,22.8937738157589,6.84287092855976,30.1058976343545,17.9021174675609,10.7430197747643,6.70775158331149,11.974154617347,17.7819184231419,6.78532922266653,9.64788220883253,7.98455192004777,14.5839546207731,18.0167599992163,15.9499906595655,6.48622655227348,19.0690237719575,15.3651993149159,15.1687084226244,26.5360198178761,20.4877494021285,18.6005691020906,12.3008367397916,32.0421646265875,21.1206386468639,9.16197618755997,9.21418668046685,13.1815540857978,12.1298657522385,10.234384381005,5.58316073650306,22.1341348212538,28.4531732778978,14.9933373252371,11.803042910081,9.25135693358809,11.1937302963913,21.4605926211047,18.837630767403,15.956321462415,13.0845483157965,12.3519396620176,15.6074075887534,12.5237463597962,43.5486226406238,14.3478683879058,34.4421225215802,19.5067238578838,21.2060866947249,4.97630965539252,8.1380959343072,14.664723478407,42.9955636586902,24.4656599114076,24.4347361842766,10.649379010947,11.236087062183,9.13631338328823,37.9505961568585,24.4580773665112,21.6074537785343,18.5454669339214,8.46935012340647,21.1190205525038,10.488972218329,42.3912042748869,24.0556604041613,14.6223851995581,10.2607506321405,10.0458533890312,7.16834578637753,17.0765727617876,12.4807205711825,19.7858101702049,24.5960917510088,24.1154002227715,17.472666824203,12.8989524353712,23.0280068468023,24.1194746384412,22.1711734043665,6.40127508823568,28.5067289213546,6.32746074185491,15.0746117111426,13.1151643723973,13.8650643143374,18.9684841252759,5.61111741760736,13.0206326791005,12.5880054036742,9.94223878363331,30.3521979839677,25.0528696878468,15.7019729807083,13.792031447763,18.38413470011,23.6473318568088,23.4310375739626,10.9138092870864,18.2038871637957,18.6130289500035,9.17266038576353,47.2662375847798,20.198975746738,17.3505653824348,12.0091432547069,8.47893568843229,18.6646986389972,8.38651802095763,4.72148652950228,4.24025769139558,11.3540068502567,8.28689732147528,22.1342304102162,24.3440033329321,26.3730746819733,26.0851714715696,9.74432066996013,25.4019996197353,19.0855125554233,13.0755269867113,25.398997457473,29.8460577415997,32.4043463662764,34.1960315158281,30.17827622776,9.53768039530987,8.38586718998165,9.77190770510057,12.9562832693445,24.7104787455411,11.2951023779692,9.40384466865282,9.29103924285377,2.64836788146173,11.4420841944637,7.05899482279827,8.64221491201268,8.16468400273523,32.3271517218716,22.7396282475669,8.34901306748566,13.8240751654553,7.03450721654796,13.2506888912221,17.4531991088093,11.504236351614,10.2652102730598,15.5059304909668,5.76652027865551,25.7815060363452,13.2556497711103,6.94632430536731,13.4375909690602,35.076268333698,30.0020391151985,16.3205341010842,13.0358744891804,18.0743890290442,25.5740651953647,16.4906801062746,19.4934999592737,18.0598872054905,15.523675407606,13.7618206965617,12.8677699782749,7.57576115884878,46.4851413385736,13.2479232439833,26.8418938048717,14.8441973443383,7.52850623034149,36.9984575587436,17.1006813760774,10.7463458078549,8.88110577419453,11.6509230915549,6.25029917407794,7.0439012490721,13.347168323948,4.80564143633539,7.56154618816195,8.39360883147014,7.98417809944023,10.0356963313133,7.64665290678128,8.69472558507053,6.22059311761283,5.58267600571789,10.9566462980464,8.26416849484701,19.0402606084398,21.5641488598471,7.81949234571006,8.27061289227161,10.6727764772054,17.1181232140405,12.8008884692209,5.49433128292469,6.73498977531838,8.83294287600557,5.5859750818118,33.0240050717386,9.39579451074762,8.61482516946635,9.72394392160103,22.0263034055821,24.3560823870823,8.02883762618528,10.3063503301992,11.6614836324281,19.0984897888206,7.4334673887352,12.5558344108094,10.362910251936,16.712297589756,18.2501135720285,10.7173169861664,8.10475525911515,11.6131429921649,14.4148333492422,9.83091635014877,12.8900395248762,10.1993571886014,19.7379699934161,5.85530930846773,20.4305743284061,8.10066181108099,4.61602375474167,5.59869534029676,27.3693954589815,20.5945389767662,16.9847217204368,26.7563613570434,19.3495084147589,35.0748618167777,27.1419323727215,19.5525721290635,11.4481566235231,18.4536483302933,7.20513673456923,9.87492642333915,11.9435736167748,11.7539481926521,15.5866233958143,13.5688780198579,12.5120982186861,21.9302375712895,6.91572524642179,13.4024785874436,22.8431072414647,11.0906921906159,10.0274264845579,23.4788606107749,22.9896075639173,6.48349562294184,17.2589981515025,27.4504386520459,9.25087038695864,10.2869585038795,7.81514011233093,17.5477485302553,11.3002623081967,19.9605716393011,11.9541524774559,15.6215619722769,17.3616909060995,8.11722370482007,26.2547908328745,9.3203820365721,9.42801238939659,14.2455707931293,11.8819057704824,34.2849174962104,19.168172166473,18.8159337313356,28.4577739189122,13.6601650050464,21.5487556729307,14.0620167738683,14.8853715219261,9.53705216661312,19.7383714276227,18.5756441159755,6.90739217084523,10.9980912941201,23.5428617183583,20.0894918512089,6.69375532777726,3.8220135030964,10.0781927289085,34.7629945811999,17.5524552305869,21.906142310125,9.62053637676303,10.3608082081518,8.8773608088854,6.22133695632683,9.46500189404611,8.63823605333127,11.2481694282088,16.5120949574462,28.6383585680063,19.2327959111878,17.1997009015938,16.5546039060733,13.9373331733645,16.4589198726064,8.41657488344263,6.87840805936855,3.4794432940146,13.5999078056559,8.65576014809791,33.6226810022712,10.9406483515363,16.828966223805,40.4581101623179,14.6433958259673,9.02937649862952,11.1465375857018,12.6985670017611,10.0510811919101,6.59894331884553,16.4899112376554,14.5552736160272,10.9890489171684,7.81664727563958,10.3382309777839,12.4403723789004,26.9841120997308,9.46335874609985,24.7026410200984,15.0853769375636,19.719082482656,14.6793370689453,9.17373332169288,20.9836177716936,7.27508945042787,16.5813262329343,18.515939418039,7.06790534516827,7.39481005810269,7.7872781182282,18.2941316010864,23.4920979721945,26.099891208356,40.2855877480828,41.1514804108963,29.6820525497549,45.3780646119199,11.063689939863,15.5419195490584,18.2417276680931,11.5844955365323,15.1396127149696,16.6645102024618,16.7931165573616,20.6708798605207,13.6800872348348,8.21048341788327,17.5841954393651,11.538987638539,11.6359322368996,12.5948339137279,8.17633141476511,12.6410935487485,20.8392367644095,14.4081916934916,5.7921684686082,7.36566657274012,7.03922827210363,13.691041748481,13.4275738844194,12.6493787095247,13.2840703770077,15.7078561228584 | |||
|short_description=p2@RBM25 | |||
}} |
Revision as of 20:55, 11 January 2014
Short description: | p2@RBM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBM25_5end |
Coexpression cluster: | C1724_Mast_medulloblastoma_small_non_cerebellum_hepatoblastoma_merkel |
Association with transcript: | 8bp_to_ENST00000526754_5end |
EntrezGene: | RBM25 |
HGNC: | 23244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.25e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.53e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-20 | 161 |
hematopoietic cell | 4.63e-20 | 177 |
leukocyte | 1.29e-14 | 136 |
myeloid cell | 1.15e-12 | 108 |
common myeloid progenitor | 1.15e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.61e-12 | 120 |
nongranular leukocyte | 3.31e-12 | 115 |
classical monocyte | 5.20e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.20e-09 | 42 |
lymphocyte | 5.49e-08 | 53 |
common lymphoid progenitor | 5.49e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.49e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.57e-22 | 235 |
disease of cellular proliferation | 7.10e-21 | 239 |
organ system cancer | 4.13e-13 | 137 |
cell type cancer | 1.11e-11 | 143 |
hematologic cancer | 1.48e-11 | 51 |
immune system cancer | 1.48e-11 | 51 |
carcinoma | 2.90e-10 | 106 |
leukemia | 5.64e-10 | 39 |
myeloid leukemia | 4.12e-08 | 31 |