FFCP PHASE1:Hg19::chr14:50360226..50360232,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:50360226..50360232,- | |||
|id=chr14:50360226..50360232,- | |||
|ontology_enrichment_celltype=CL:0002057!3.68e-36!42;CL:0000860!2.89e-35!45;CL:0000738!1.56e-32!140;CL:0002031!4.42e-30!124;CL:0000557!9.97e-30!71;CL:0000839!1.59e-28!70;CL:0002087!1.37e-27!119;CL:0000766!4.52e-27!76;CL:0002009!4.51e-26!65;CL:0002194!1.88e-25!63;CL:0000576!1.88e-25!63;CL:0000040!1.88e-25!63;CL:0000559!1.88e-25!63;CL:0000037!2.41e-23!172;CL:0000566!2.41e-23!172;CL:0000988!2.51e-23!182;CL:0002032!6.81e-23!165;CL:0000837!6.81e-23!165;CL:0000763!4.83e-19!112;CL:0000049!4.83e-19!112;CL:0002393!5.97e-18!9;CL:0002397!5.97e-18!9;CL:0000875!4.23e-07!3;CL:0002396!4.23e-07!3;CL:0000623!4.68e-07!3;CL:0000825!4.68e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.54e-11;39!CL:0000234;2.54e-11;39!CL:0000860;2.78e-09;33!CL:0002057;2.78e-09;33!CL:0000766;1.35e-08;69!CL:0000623;6.78e-08;3!CL:0000576;1.29e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.04e-14,48;CL:0000234,1.04e-14,48;CL:0000839,3.08e-14,66;CL:0000557,5.03e-14,67;CL:0000766,4.75e-13,72;CL:0002031,7.40e-13,120;CL:0000860,7.98e-12,42;CL:0002057,7.98e-12,42;CL:0002194,9.30e-12,59;CL:0000576,9.30e-12,59;CL:0000040,9.30e-12,59;CL:0000559,9.30e-12,59;CL:0002009,2.24e-11,61;CL:0000738,2.65e-11,136;CL:0002087,1.45e-10,115;CL:0002032,1.75e-09,161;CL:0000837,1.75e-09,161;CL:0000037,4.55e-09,168;CL:0000763,1.19e-08,108;CL:0000049,1.19e-08,108;CL:0000988,1.39e-08,177;CL:0000623,5.93e-08,3;CL:0000825,5.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.08e-21;1!DOID:0060061;2.08e-21;1!DOID:8691;2.08e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.88e-21,1;DOID:0060061,1.88e-21,1;DOID:8691,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.05e-26!80;UBERON:0001474!2.11e-25!86;UBERON:0002193!3.75e-24!112;UBERON:0002390!1.27e-23!102;UBERON:0003061!1.27e-23!102;UBERON:0004765!6.87e-20!101;UBERON:0001434!6.87e-20!101;UBERON:0002405!2.53e-18!115;UBERON:0002204!7.91e-08!167;UBERON:0003081!2.75e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.32e-12,76;UBERON:0001474,1.89e-11,82;UBERON:0004765,2.02e-10,90;UBERON:0002405,4.44e-10,93;UBERON:0002390,1.48e-09,98;UBERON:0003061,1.48e-09,98;UBERON:0001434,2.32e-09,100;UBERON:0002193,1.19e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0.575384784644301,1.0246428261164,0.47296445977717,1.03423704220986,0.645484683583826,1.35426486594342,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0.852449501065388,0,0,0,0,1.5644487552606,0.868755378820466,0,0.736555271975129,0.316462387440884,0.422510572623884,0.637812899895131,1.04829322754188,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0.99458338599545,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,1.94826728407911,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.226618685395132,0,0.68725489096526,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417687798021821,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:50360226..50360232,- | |||
}} |
Revision as of 19:58, 11 January 2014
Short description: | p@chr14:50360226..50360232, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:50360226..50360232, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.04e-14 | 48 |
phagocyte | 1.04e-14 | 48 |
myeloid lineage restricted progenitor cell | 3.08e-14 | 66 |
granulocyte monocyte progenitor cell | 5.03e-14 | 67 |
myeloid leukocyte | 4.75e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 7.40e-13 | 120 |
classical monocyte | 7.98e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.98e-12 | 42 |
monopoietic cell | 9.30e-12 | 59 |
monocyte | 9.30e-12 | 59 |
monoblast | 9.30e-12 | 59 |
promonocyte | 9.30e-12 | 59 |
macrophage dendritic cell progenitor | 2.24e-11 | 61 |
leukocyte | 2.65e-11 | 136 |
nongranular leukocyte | 1.45e-10 | 115 |
hematopoietic oligopotent progenitor cell | 1.75e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-09 | 161 |
hematopoietic stem cell | 4.55e-09 | 168 |
myeloid cell | 1.19e-08 | 108 |
common myeloid progenitor | 1.19e-08 | 108 |
hematopoietic cell | 1.39e-08 | 177 |
natural killer cell | 5.93e-08 | 3 |
pro-NK cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.32e-12 | 76 |
bone element | 1.89e-11 | 82 |
skeletal element | 2.02e-10 | 90 |
immune system | 4.44e-10 | 93 |
hematopoietic system | 1.48e-09 | 98 |
blood island | 1.48e-09 | 98 |
skeletal system | 2.32e-09 | 100 |
hemolymphoid system | 1.19e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.88e-21 | 1 |
cutaneous T cell lymphoma | 1.88e-21 | 1 |
mycosis fungoides | 1.88e-21 | 1 |