FFCP PHASE1:Hg19::chr14:36990398..36990415,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENST00000518149_5end | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_10_at_NKX2-1_5end | |||
|id=chr14:36990398..36990415,- | |||
|ontology_enrichment_celltype=CL:0002553!3.32e-08!1;CL:0000167!1.04e-07!1;CL:0000164!1.04e-07!1;CL:0000502!1.04e-07!1;CL:0000172!1.04e-07!1;CL:0000173!1.04e-07!1;CL:0002351!1.04e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.70e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.21e-40,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.24e-71;5 | |||
|ontology_enrichment_disease=DOID:3112!3.55e-08!1;DOID:4430!1.04e-07!1;DOID:1324!2.86e-07!15;DOID:3905!3.89e-07!9;DOID:0050615!8.08e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.70e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.30e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0002046!4.66e-22!5;UBERON:0004117!4.66e-22!5;UBERON:0007689!4.66e-22!5;UBERON:0007123!4.66e-22!5;UBERON:0003091!4.66e-22!5;UBERON:0008947!1.51e-15!38;UBERON:0003258!1.51e-15!38;UBERON:0000341!1.18e-14!2;UBERON:0005178!3.14e-14!34;UBERON:0002224!3.14e-14!34;UBERON:0002048!5.07e-14!22;UBERON:0000117!5.07e-14!22;UBERON:0000171!5.07e-14!22;UBERON:0000170!5.07e-14!22;UBERON:0005597!5.07e-14!22;UBERON:0000118!5.07e-14!22;UBERON:0005181!8.80e-14!35;UBERON:0003127!1.27e-13!2;UBERON:0000065!1.17e-10!53;UBERON:0009722!4.18e-10!11;UBERON:0007690!4.18e-10!11;UBERON:0000915!8.37e-09!52;UBERON:0002171!3.80e-08!1;UBERON:0006518!3.80e-08!1;UBERON:0008949!3.80e-08!1;UBERON:0000101!3.80e-08!1;UBERON:0002167!3.80e-08!1;UBERON:0005153!5.54e-08!37;UBERON:0005911!7.17e-08!82;UBERON:0002902!1.87e-07!1;UBERON:0009899!1.87e-07!1;UBERON:0008814!1.98e-07!15;UBERON:0002581!1.99e-07!1;UBERON:0001004!2.14e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.24e-71;5!UBERON:0000341;4.66e-21;2!UBERON:0002368;8.63e-11;33!UBERON:0000974;6.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.52e-71,5;UBERON:0004117,2.52e-71,5;UBERON:0007689,2.52e-71,5;UBERON:0007123,2.52e-71,5;UBERON:0003091,2.52e-71,5;UBERON:0009722,4.79e-33,11;UBERON:0007690,4.79e-33,11;UBERON:0000341,4.66e-21,2;UBERON:0008814,1.37e-20,18;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0005911,2.13e-08,82;UBERON:0003929,2.08e-07,54;UBERON:0002530,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.628817220398664,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,4.28515976634733,0,0,0.448527450322454,15.0207293536469,11.7227969595767,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@NKX2-1 | |||
}} |
Revision as of 19:48, 11 January 2014
Short description: | p10@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NKX2-1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | -44bp_to_ENST00000518149_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.21e-40 | 1 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.52e-71 | 5 |
pharyngeal pouch | 2.52e-71 | 5 |
thyroid diverticulum | 2.52e-71 | 5 |
pharyngeal pouch 2 | 2.52e-71 | 5 |
thyroid primordium | 2.52e-71 | 5 |
entire pharyngeal arch endoderm | 4.79e-33 | 11 |
early pharyngeal endoderm | 4.79e-33 | 11 |
throat | 4.66e-21 | 2 |
pharyngeal arch system | 1.37e-20 | 18 |
endocrine gland | 5.12e-11 | 35 |
endocrine system | 9.62e-09 | 45 |
endo-epithelium | 2.13e-08 | 82 |
gut epithelium | 2.08e-07 | 54 |
gland | 7.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.30e-40 | 1 |