FFCP PHASE1:Hg19::chr14:27067231..27067247,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7886 | |||
|TSSclassifier=weak | |||
|UniProt=P51513,D3DS81 | |||
|association_with_transcript=-271bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | |||
|coexpression_cluster_id=C555 | |||
|description=CAGE_peak_1_at_NOVA1_5end | |||
|id=chr14:27067231..27067247,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.30e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.35e-39!94;UBERON:0001016!3.35e-39!94;UBERON:0005743!1.65e-38!86;UBERON:0001049!9.24e-38!57;UBERON:0005068!9.24e-38!57;UBERON:0006241!9.24e-38!57;UBERON:0007135!9.24e-38!57;UBERON:0001017!1.99e-37!82;UBERON:0007023!3.44e-37!115;UBERON:0003075!1.29e-35!86;UBERON:0007284!1.29e-35!86;UBERON:0002346!1.57e-35!90;UBERON:0002616!4.69e-32!59;UBERON:0000955!4.46e-31!69;UBERON:0006238!4.46e-31!69;UBERON:0003080!1.54e-28!42;UBERON:0002780!8.57e-28!41;UBERON:0001890!8.57e-28!41;UBERON:0006240!8.57e-28!41;UBERON:0000924!8.97e-27!173;UBERON:0006601!8.97e-27!173;UBERON:0004121!2.19e-26!169;UBERON:0000033!8.81e-26!123;UBERON:0003056!1.32e-25!61;UBERON:0000153!6.96e-25!129;UBERON:0007811!6.96e-25!129;UBERON:0002020!1.51e-23!34;UBERON:0003528!1.51e-23!34;UBERON:0001893!2.36e-23!34;UBERON:0002791!1.03e-22!33;UBERON:0001869!4.52e-22!32;UBERON:0000119!2.34e-20!312;UBERON:0000483!2.70e-20!309;UBERON:0000481!9.97e-20!347;UBERON:0000475!5.49e-19!365;UBERON:0000025!2.42e-18!194;UBERON:0000956!2.17e-17!25;UBERON:0000203!2.17e-17!25;UBERON:0004111!4.41e-17!241;UBERON:0002619!1.41e-16!22;UBERON:0000477!7.51e-16!286;UBERON:0001950!2.50e-15!20;UBERON:0000922!1.26e-12!612;UBERON:0000468!2.82e-12!659;UBERON:0002050!1.04e-10!605;UBERON:0005423!1.04e-10!605;UBERON:0000923!2.18e-10!604;UBERON:0005291!2.18e-10!604;UBERON:0006598!2.18e-10!604;UBERON:0002532!2.18e-10!604;UBERON:0003076!3.44e-10!15;UBERON:0003057!3.44e-10!15;UBERON:0000064!1.42e-09!219;UBERON:0000467!1.89e-09!625;UBERON:0000480!2.80e-09!626;UBERON:0004732!1.12e-08!13;UBERON:0004733!5.22e-08!12;UBERON:0002028!5.22e-08!12;UBERON:0007277!5.22e-08!12;UBERON:0000062!1.01e-07!511;UBERON:0002308!1.30e-07!9;UBERON:0000125!1.30e-07!9;UBERON:0002420!1.90e-07!9;UBERON:0007245!1.90e-07!9;UBERON:0010009!1.90e-07!9;UBERON:0010011!1.90e-07!9;UBERON:0000454!1.90e-07!9;UBERON:0002298!4.70e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.34e-24;34!UBERON:0002020;2.34e-24;34!UBERON:0002780;3.57e-24;41!UBERON:0001890;3.57e-24;41!UBERON:0001893;3.85e-24;34!UBERON:0001869;4.07e-24;32!UBERON:0002791;4.10e-24;32!UBERON:0000073;1.39e-23;53!UBERON:0002616;1.39e-23;53!UBERON:0000956;6.76e-21;25!UBERON:0000203;6.76e-21;25!UBERON:0002619;7.33e-20;22!UBERON:0001950;2.42e-18;20!UBERON:0001017;1.53e-17;75!UBERON:0000955;1.73e-16;68!UBERON:0001016;9.89e-16;83!UBERON:0007023;3.66e-12;114!UBERON:0004732;3.02e-09;13!UBERON:0000125;6.07e-09;9!UBERON:0002308;6.07e-09;9!UBERON:0002420;9.80e-09;9!UBERON:0007245;9.80e-09;9!UBERON:0010009;9.80e-09;9!UBERON:0010011;9.80e-09;9!UBERON:0000454;9.80e-09;9!UBERON:0004733;1.90e-08;12!UBERON:0002028;1.90e-08;12!UBERON:0011216;2.24e-08;132!UBERON:0009663;3.59e-07;7!UBERON:0010314;5.98e-07;132!UBERON:0001871;6.53e-07;6!UBERON:0001894;8.68e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.60e-44,89;UBERON:0001049,8.51e-44,56;UBERON:0005068,8.51e-44,56;UBERON:0006241,8.51e-44,56;UBERON:0007135,8.51e-44,56;UBERON:0001017,3.32e-43,81;UBERON:0003075,9.44e-43,82;UBERON:0007284,9.44e-43,82;UBERON:0007023,1.66e-42,114;UBERON:0002346,5.62e-42,86;UBERON:0000073,6.28e-41,53;UBERON:0002616,6.28e-41,53;UBERON:0010314,6.73e-37,132;UBERON:0000955,3.10e-36,68;UBERON:0006238,3.10e-36,68;UBERON:0002780,1.49e-33,41;UBERON:0001890,1.49e-33,41;UBERON:0003080,1.49e-33,41;UBERON:0006240,1.49e-33,41;UBERON:0010371,5.04e-32,104;UBERON:0004121,1.69e-31,171;UBERON:0000924,1.69e-31,171;UBERON:0006601,1.69e-31,171;UBERON:0003056,2.25e-31,61;UBERON:0003528,2.27e-28,34;UBERON:0002020,2.27e-28,34;UBERON:0001893,3.92e-28,34;UBERON:0011216,8.36e-27,223;UBERON:0001869,1.44e-26,32;UBERON:0002791,1.50e-26,32;UBERON:0000956,7.46e-21,25;UBERON:0000203,7.46e-21,25;UBERON:0002619,7.33e-20,22;UBERON:0001950,2.45e-18,20;UBERON:0000483,2.06e-15,306;UBERON:0000119,7.92e-15,309;UBERON:0000025,2.68e-13,192;UBERON:0004111,5.93e-13,240;UBERON:0000922,7.42e-12,592;UBERON:0003076,3.76e-11,15;UBERON:0003057,3.76e-11,15;UBERON:0000923,5.68e-11,560;UBERON:0010316,5.68e-11,560;UBERON:0005291,5.68e-11,560;UBERON:0006598,5.68e-11,560;UBERON:0010317,5.68e-11,560;UBERON:0002532,5.68e-11,560;UBERON:0002050,6.37e-11,564;UBERON:0005423,2.12e-10,581;UBERON:0004732,2.47e-09,13;UBERON:0000125,6.15e-09,9;UBERON:0002308,6.15e-09,9;UBERON:0002420,9.74e-09,9;UBERON:0007245,9.74e-09,9;UBERON:0010009,9.74e-09,9;UBERON:0010011,9.74e-09,9;UBERON:0000454,9.74e-09,9;UBERON:0004733,1.57e-08,12;UBERON:0002028,1.57e-08,12;UBERON:0007277,1.57e-08,12;UBERON:0009663,3.62e-07,7;UBERON:0001871,6.46e-07,6;UBERON:0001894,8.81e-07,7;UBERON:0006222,8.81e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,5.05375898741465,13.8428382945914,0.491467873003018,0.697801167972428,0,0.263766978228454,1.48519623552056,0.994192127183747,0,0,0,0.975865597581014,1.84681587115182,0.816002764977012,4.07491137921514,12.5943834337665,3.55873505189499,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0,0.144846518960824,0,0,4.72674085820339,2.88248216701333,2.54720878510066,5.63210024640164,0,0,0,0,0,0,0,0,0.39752481473341,0,1.38856200643038,2.26123176769604,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0.81014194788176,1.42879565254528,2.02076435363553,0.788280363383256,0,0,0.183201743930407,0,0,0,0,0.506522046658319,3.31022952033047,1.43418310374407,1.06400514659507,2.24271040056923,0,0,9.02512002659322,3.09834545760283,7.5192475432191,1.51357427644931,0,6.09235722767871,2.80944069147288,2.2818872861778,2.69007624993242,2.11382097558777,2.26622122115384,1.54495887372473,2.04154171254893,1.10550885580591,8.16273671288547,1.18800285728205,0.989067717114227,1.82032272387605,0,1.34668891163253,3.1279629967991,1.10825646193673,0.438977620880838,0,0.150238058906597,0.794025282120147,0.179389635688862,0.213557388818567,0.635795703478686,0,0.103052529238439,0.257640540045629,0,0.675105328965065,0.194874010322397,0.252433774244115,0.736399189138395,2.10139873864455,0,0,0.847802961552438,0,0,0,2.31750041646231,3.44577397635862,3.36962434321603,8.60386756627575,3.02785021050754,1.82488679537915,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,1.6462960453256,0,0,0,0.590789906681404,3.5317047953172,0.245976877086227,0.514703430895577,0,0,0,0.0925884451585296,4.23550796903422,3.11980435583874,0,5.91245065372892,1.40890433082986,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,1.17217447210047,3.4214489204541,0,0,0,0.336393253036082,0.87192013766656,0.1466765716419,0.387815147273333,7.15312891703765,0,0.531876233169741,0,0.257207374262142,0,0,4.57529579706072,0,0,0.325736184293735,1.77695974371273,0,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,1.19812427745791,3.44585807502342,1.42636905040718,0,1.02738161275192,0.179060963239896,0,0,0,0,64.5400345525057,24.7265722329481,5.41302168944387,8.37581326671744,9.56908127479745,0,0,0,2.4538298343828,1.00034104211935,0.542530047399471,0.207970861530807,1.42743191037729,0,0,0,0,0,0,0.184369168541703,1.91143951829782,0.587403472388222,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,1.42049380250502,2.46381468041427,1.03850885836724,1.51073491997947,0.362578348774867,0,0,0.68888668898764,1.45672934405374,2.22911505431021,0.451199612907412,0.462092022626489,0.784349769176855,0,0.316654886678627,1.13733384070897,0.170093705276516,0.215915916102139,0,0.812839312631559,1.00337954770971,0,0,0.447749509444357,0,0,1.53870075069834,1.96808787419823,2.60302715731442,2.26690225624989,0,0,0,0.650060246036521,0,2.70678011217942,3.08097234229289,5.52613229014066,0.275673144969061,1.71872391789238,5.36561767482646,2.04543905798642,1.06838442776085,0,0.192190067365106,0,0.30347334256665,0.464845549297286,1.25924938732256,2.0911118104818,4.00443654228915,1.06461206063404,0,1.66791797193528,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0.855877976067841,0.636406495851874,0.78494864019923,0.539617372749944,1.09814811894422,1.29593642580255,1.41527737101321,0,0.842516912477962,6.33923860816467,0.487426979262569,0,0.409499734223957,1.27264888758341,1.13008116620243,0,0,0.876901770507525,6.36653087693356,3.27947376023316,0,0.30982349809975,0,0,0,0,1.77380532035299,0.633322905892992,0.658589785919804,3.41525856389144,1.04980416073495,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,72.1859891447519,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5878168627749,1.33496573924465,0,0,0,0,0,28.8302817852226,43.607519087259,1.55832187032068,0,7.81164010073576,5.18044769452781,10.7750727057148,0,13.7040034552887,9.84678443688556,0,0,2.86433879480975,0,8.58197629041323,0,0,25.2026513984757,28.2015018412028,21.9575177801314,0.260427761085233,2.18649999990489,53.6499685821747,0,4.32231205497703,0.945550727071745,6.55012409158783,0.291604613383254,9.89662471119766,40.7441037474366,43.5353143437723,85.4457723375666,190.638644121431,75.6601904521082,27.6425600414005,0,0,16.3904050613088,0.341826167541004,0,0.179515288819544,0.325942115766024,0,0.549585560411174,0,1.02193298195737,0,0,0,0,0,0,0,0.632994193584081,0,0,19.9077548562724,7.96209544862804,5.48436899920703,7.33236173920351,6.22694370229306,1.35920332841153,2.08843899010911,35.4529959478361,7.2231988256891,21.0838001152805,0,0,0,11.4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| |||
|short_description=p1@NOVA1 | |||
}} |
Revision as of 19:32, 11 January 2014
Short description: | p1@NOVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOVA1_5end |
Coexpression cluster: | C555_cerebellum_pineal_occipital_middle_parietal_medial_locus |
Association with transcript: | -271bp_to_ENST00000539517, NM_002515, NM_006489, NM_006491, uc001wpy.2, uc001wpz.2, uc001wqa.2, uc001wqb.2_5end |
EntrezGene: | NOVA1 |
HGNC: | 7886 |
UniProt: | P51513D3DS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data