FFCP PHASE1:Hg19::chr13:93879574..93879597,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |||
|association_with_transcript=479bp_to_ENST00000377047_5end | |||
|description=CAGE_peak_8_at_GPC6_5end | |||
|id=chr13:93879574..93879597,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.46e-20!180;CL:0000057!1.20e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.39e-08;13!CL:0000153;2.18e-07;9!CL:0000447;2.18e-07;9!CL:0000138;2.52e-07;6!CL:0000499;4.27e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.23e-07,9;CL:0000447,1.23e-07,9;CL:0000136,1.94e-07,15;CL:0000058,2.21e-07,6;CL:0000138,2.21e-07,6;CL:0000499,4.90e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.35e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.20e-17!365;UBERON:0000481!9.83e-15!347;UBERON:0000483!7.18e-11!309;UBERON:0000119!9.17e-11!312;UBERON:0000477!2.69e-09!286;UBERON:0000468!3.21e-09!659;UBERON:0005256!1.08e-08!143;UBERON:0002100!1.31e-08!216;UBERON:0000025!4.78e-08!194;UBERON:0004111!1.06e-07!241;UBERON:0002107!2.94e-07!19;UBERON:0006925!2.94e-07!19;UBERON:0008836!2.94e-07!19;UBERON:0000922!6.13e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.02e-11;19!UBERON:0006925;9.02e-11;19!UBERON:0002423;4.49e-09;25!UBERON:0002368;6.40e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.16e-11,19;UBERON:0006925,5.16e-11,19;UBERON:0008836,5.16e-11,19;UBERON:0009497,3.92e-09,25;UBERON:0000015,3.92e-09,25;UBERON:0002423,3.92e-09,25;UBERON:0006235,3.92e-09,25;UBERON:0004161,3.92e-09,25;UBERON:0003104,4.29e-09,160;UBERON:0009142,4.29e-09,160;UBERON:0008835,8.66e-09,22;UBERON:0003894,8.66e-09,22;UBERON:0002368,2.16e-08,35;UBERON:0009854,3.47e-08,23;UBERON:0005256,7.00e-08,122;UBERON:0007499,3.89e-07,25 | |||
|phase1_expression=1.2717486548939,1.07050261945492,2.25527046553554,0,4.46961094427288,1.74467704820074,0,1.89515962028049,2.35067065379855,0.245733936501509,0.697801167972428,0,0,1.60896258848061,1.98838425436749,0,1.20538905604795,0,0,0.61560529038394,0.408001382488506,0.626909442956176,2.0036519099174,2.18999080116615,1.12988375635323,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.9408389224012,4.69870898099936,2.50668955317945,4.77993512570718,3.9764297352555,4.86634870302636,1.32348744029695,2.21729397462564,1.49319135678314,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.98788780678127,0.759783069987479,2.51577443545116,7.45775213946916,1.41867352879343,0.560677600142307,3.20246987189115,0.98667019366864,5.60179863719579,1.75123873690594,1.14423332179421,0.605429710579726,0,0.70296429550139,0.624320153660641,0,0.448346041655403,0.939475989150119,0.485618833104395,0.98315564691574,0.408308342509787,0.491337269247072,1.13658359293342,1.18800285728205,0.989067717114227,0,0.718618141816238,0.505008341862199,0.500474079487857,0.554128230968366,1.75591048352335,0,2.85452311922534,0.340296549480063,1.25572744982203,2.77624605464138,1.27159140695737,3.00091096084402,1.44273540933814,1.28820270022815,2.23340227597908,3.88185564154912,1.36411807225678,2.01947019395292,1.10459878370759,1.45481451136931,3.19508633264953,1.20902517873168,0,0,0.272746120590835,0,0.243947412259191,0.530119073285941,0.348581828608555,0.725627385107593,0.756962552626885,1.09493207722749,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,7.60530208930985,8.84544495009863,5.90789906681404,0,0,1.88724591328378,0.109750285408626,0,0,0,0.651616610620649,0,0,3.59384255422738,4.93116515790451,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0,2.19761916788222,0,0,0.531876233169741,0,0.514414748524284,0,0,3.71742783511184,1.08524321078289,0,0.325736184293735,4.97548728239564,0,2.1100756394171,3.48613383440118,0.399891964728228,0,0,0,0.958499421966331,1.14861935834114,0,0.434343920002738,2.67119219315498,1.96967059563885,0,0,0,0,0,1.30139853857622,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,6.74803204455269,1.00034104211935,1.62759014219841,0,0,0,0.234282829985426,2.10662269809403,0,2.0694614258501,0,0.737476674166813,0.434418072340414,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.496215615637554,1.2276957863045,0.841980283299221,2.17836553734692,1.02341449813341,3.05622450172854,0,0.308419387605311,0.710246901252508,0.492762936082855,1.55776328755086,0.581051892299796,0,0.200506470303285,0.184161977871793,1.03333003348146,0.910455840033585,2.09799063935079,0,0.539107359730903,0,0,1.68882606228601,0,0,0,0,0.541892875087706,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0.325378394664303,2.98818933778395,0.640986253728404,0.742585499285292,0,0,1.6068392984416,2.41676795730305,0.616194468458578,1.84204409671355,0.964856007391714,1.28904293841928,2.17525040871343,1.87498580315422,0.712256285173899,0,0,1.02090169995667,0.4046311234222,0,3.77774816196768,1.3940745403212,0.924100740528266,0,1.73986598415015,0.74129687641568,1.5743737541619,0,1.89827654831236,2.09693213316207,0,4.70732886837312,2.22742273548156,0,1.2591072030832,1.92175920815238,2.12062324222236,0,0,2.52755073743389,0.975267478179181,1.21856744815642,0,0.9554993798559,1.55545975149084,2.26016233240486,3.85955740482287,0,0.438450885253763,0,1.9676842561399,0.405820753925408,0.6196469961995,1.40847801266121,0.573645408816206,0.687743287091848,0,0.709522128141196,3.37772216476263,1.97576935775941,0.379473173765715,0.699869440489966,0,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.667396566847634,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0.296964680832639,0,0,0.140669416410513,1.22439575525196,0,0.422250816255987,2.59022384726391,0.276283915531148,0,1.1249555075237,0,0,0.179736702294654,0,0,2.07151151837561,0,1.11136990144637,1.93866549219044,0.0927680981618513,0,1.30213880542617,0,2.17499872630438,0,0.508507300585533,0.236387681767936,0,0.291604613383254,0.868124974666461,0,0.482385754501632,6.10326945268333,1.10579259931225,0.886642856860642,0.219385397153973,0,0,2.15460723810632,7.97594390929008,0,0,0,0,0.274792780205587,0,0,1.41282230755522,0,0,0,0,0,0.317873157960757,0,0,0,1.08194319871046,0,0.619202951523374,4.888241159469,0,0,0.522109747527277,1.01101699471016,3.21031058919516,1.1713222286267,0,0,0,0,1.20990716048664,0.61214552326098,2.46427660551103,0,0,0,0,0.941798755221676,0,0,0,0,0,0,0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| |||
|short_description=p8@GPC6 | |||
}} |
Revision as of 18:16, 11 January 2014
Short description: | p8@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GPC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 479bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.23e-07 | 9 |
carbohydrate secreting cell | 1.23e-07 | 9 |
fat cell | 1.94e-07 | 15 |
chondroblast | 2.21e-07 | 6 |
chondrocyte | 2.21e-07 | 6 |
stromal cell | 4.90e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
liver | 5.16e-11 | 19 |
digestive gland | 5.16e-11 | 19 |
liver bud | 5.16e-11 | 19 |
epithelium of foregut-midgut junction | 3.92e-09 | 25 |
anatomical boundary | 3.92e-09 | 25 |
hepatobiliary system | 3.92e-09 | 25 |
foregut-midgut junction | 3.92e-09 | 25 |
septum transversum | 3.92e-09 | 25 |
mesenchyme | 4.29e-09 | 160 |
entire embryonic mesenchyme | 4.29e-09 | 160 |
hepatic diverticulum | 8.66e-09 | 22 |
liver primordium | 8.66e-09 | 22 |
endocrine gland | 2.16e-08 | 35 |
digestive tract diverticulum | 3.47e-08 | 23 |
trunk mesenchyme | 7.00e-08 | 122 |
epithelial sac | 3.89e-07 | 25 |