FFCP PHASE1:Hg19::chr13:47149750..47149767,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:47149750..47149767,+ | |||
|id=chr13:47149750..47149767,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.72e-29!5;CL:0000457!1.72e-29!5;CL:0002191!1.72e-29!5;CL:0000097!1.72e-29!5;CL:0000831!1.72e-29!5;CL:0002028!1.72e-29!5;CL:0002031!1.03e-17!124;CL:0000163!2.59e-16!9;CL:0000738!3.58e-15!140;CL:0000148!1.30e-14!10;CL:0000541!1.30e-14!10;CL:0000945!4.35e-14!24;CL:0000826!4.35e-14!24;CL:0002032!3.45e-12!165;CL:0000837!3.45e-12!165;CL:0000037!1.65e-11!172;CL:0000566!1.65e-11!172;CL:0000557!4.23e-11!71;CL:0000988!1.26e-10!182;CL:0000147!2.28e-10!14;CL:0000235!6.51e-10!10;CL:0000839!1.43e-09!70;CL:0002087!6.35e-09!119;CL:0002567!7.78e-09!3;CL:0000766!1.21e-08!76;CL:0002566!1.98e-07!1;CL:0000838!2.13e-07!52;CL:0000151!2.66e-07!35;CL:0000542!3.13e-07!53;CL:0000051!3.13e-07!53;CL:0000710!3.54e-07!20;CL:0000946!7.29e-07!1;CL:0000786!7.29e-07!1;CL:0000980!7.29e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.04e-30;5!CL:0000235;8.17e-26;6!CL:0002566;5.72e-18;1!CL:0000163;5.64e-17;9!CL:0000148;1.52e-07;10!CL:0002567;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.86e-30,5;CL:0002028,3.86e-30,5;CL:0000235,7.84e-26,6;CL:0002566,6.23e-18,1;CL:0000163,4.41e-17,9;CL:0000839,9.38e-09,66;CL:0000557,1.27e-08,67;CL:0002031,3.20e-08,120;CL:0000766,5.16e-08,72;CL:0000148,1.62e-07,10;CL:0000541,1.62e-07,10;CL:0000738,3.49e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019=DOID:630;2.90e-18;1!DOID:0050177;2.90e-18;1!DOID:0050427;2.90e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.16e-18,1;DOID:0050177,3.16e-18,1;DOID:0050427,3.16e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.81e-13!7;UBERON:0002390!1.38e-12!102;UBERON:0003061!1.38e-12!102;UBERON:0002193!3.70e-11!112;UBERON:0002405!8.89e-11!115;UBERON:0002371!1.40e-09!80;UBERON:0001474!9.62e-09!86;UBERON:0002106!1.19e-08!3;UBERON:0004854!1.19e-08!3;UBERON:0009034!1.19e-08!3;UBERON:0002095!1.19e-08!3;UBERON:0004782!1.19e-08!3;UBERON:0003281!1.19e-08!3;UBERON:0009664!1.19e-08!3;UBERON:0002296!1.19e-08!3;UBERON:0005602!1.19e-08!3;UBERON:0001179!1.19e-08!3;UBERON:0006293!1.19e-08!3;UBERON:0004765!4.35e-07!101;UBERON:0001434!4.35e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.81e-08,93;UBERON:0002390,7.76e-08,98;UBERON:0003061,7.76e-08,98;UBERON:0002371,1.39e-07,76;UBERON:0002193,4.50e-07,108;UBERON:0001474,5.14e-07,82;UBERON:0002106,7.28e-07,3;UBERON:0004854,7.28e-07,3;UBERON:0009034,7.28e-07,3;UBERON:0002095,7.28e-07,3;UBERON:0004782,7.28e-07,3;UBERON:0003281,7.28e-07,3;UBERON:0009664,7.28e-07,3;UBERON:0002296,7.28e-07,3;UBERON:0005602,7.28e-07,3;UBERON:0001179,7.28e-07,3;UBERON:0006293,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.656804715599566,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,5.14809383306323,3.26988557035202,0,0,0,0,0,0,1.97065295158377,1.32072651019839,0.829312462163088,0.288239906833923,1.64115163454294,2.15892840593375,0.763976851116555,1.17217447210047,0,0,0.901029173531752,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,2.29864658627337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12909587685173 | |||
|short_description=p@chr13:47149750..47149767,+ | |||
}} |
Revision as of 17:41, 11 January 2014
Short description: | p@chr13:47149750..47149767, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:47149750..47149767, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.86e-30 | 5 |
basophil mast progenitor cell | 3.86e-30 | 5 |
macrophage | 7.84e-26 | 6 |
dark melanocyte | 6.23e-18 | 1 |
endocrine cell | 4.41e-17 | 9 |
myeloid lineage restricted progenitor cell | 9.38e-09 | 66 |
granulocyte monocyte progenitor cell | 1.27e-08 | 67 |
hematopoietic lineage restricted progenitor cell | 3.20e-08 | 120 |
myeloid leukocyte | 5.16e-08 | 72 |
melanocyte | 1.62e-07 | 10 |
melanoblast | 1.62e-07 | 10 |
leukocyte | 3.49e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.81e-08 | 93 |
hematopoietic system | 7.76e-08 | 98 |
blood island | 7.76e-08 | 98 |
bone marrow | 1.39e-07 | 76 |
hemolymphoid system | 4.50e-07 | 108 |
bone element | 5.14e-07 | 82 |
spleen | 7.28e-07 | 3 |
gastrointestinal system mesentery | 7.28e-07 | 3 |
stomach region | 7.28e-07 | 3 |
mesentery | 7.28e-07 | 3 |
gastrointestinal system serosa | 7.28e-07 | 3 |
mesentery of stomach | 7.28e-07 | 3 |
gut mesentery | 7.28e-07 | 3 |
dorsal mesentery | 7.28e-07 | 3 |
dorsal mesogastrium | 7.28e-07 | 3 |
peritoneal cavity | 7.28e-07 | 3 |
spleen primordium | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.16e-18 | 1 |
monogenic disease | 3.16e-18 | 1 |
xeroderma pigmentosum | 3.16e-18 | 1 |