FFCP PHASE1:Hg19::chr12:103351694..103351704,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=429 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=738 | |||
|TSSclassifier=weak | |||
|UniProt=P50553 | |||
|association_with_transcript=230bp_to_ENST00000266744_5end | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_6_at_ASCL1_5end | |||
|id=chr12:103351694..103351704,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.31e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.03e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;6.05e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.84e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.81e-47!57;UBERON:0005068!4.81e-47!57;UBERON:0006241!4.81e-47!57;UBERON:0007135!4.81e-47!57;UBERON:0001017!2.14e-44!82;UBERON:0000073!2.93e-44!94;UBERON:0001016!2.93e-44!94;UBERON:0005743!6.50e-42!86;UBERON:0002616!2.26e-36!59;UBERON:0001893!1.92e-35!34;UBERON:0002780!2.18e-34!41;UBERON:0001890!2.18e-34!41;UBERON:0006240!2.18e-34!41;UBERON:0003080!1.94e-33!42;UBERON:0002791!2.92e-33!33;UBERON:0003075!1.02e-32!86;UBERON:0007284!1.02e-32!86;UBERON:0002020!5.42e-32!34;UBERON:0003528!5.42e-32!34;UBERON:0000955!7.45e-32!69;UBERON:0006238!7.45e-32!69;UBERON:0002346!7.10e-31!90;UBERON:0001869!8.66e-31!32;UBERON:0002619!1.43e-29!22;UBERON:0000956!4.53e-29!25;UBERON:0000203!4.53e-29!25;UBERON:0001950!9.46e-29!20;UBERON:0003056!2.55e-23!61;UBERON:0004121!5.23e-23!169;UBERON:0000924!3.09e-22!173;UBERON:0006601!3.09e-22!173;UBERON:0007023!2.39e-19!115;UBERON:0000153!3.54e-17!129;UBERON:0007811!3.54e-17!129;UBERON:0000033!6.82e-16!123;UBERON:0003076!2.17e-14!15;UBERON:0003057!2.17e-14!15;UBERON:0002298!8.28e-13!8;UBERON:0000200!3.21e-12!6;UBERON:0000025!1.45e-11!194;UBERON:0001872!1.95e-10!5;UBERON:0002021!6.20e-10!5;UBERON:0002240!6.60e-10!3;UBERON:0001896!1.07e-09!3;UBERON:0005290!1.07e-09!3;UBERON:0010096!1.07e-09!3;UBERON:0002771!1.29e-09!3;UBERON:0001871!4.60e-09!7;UBERON:0004733!3.77e-08!12;UBERON:0002028!3.77e-08!12;UBERON:0007277!3.77e-08!12;UBERON:0000064!7.60e-08!219;UBERON:0004111!1.14e-07!241;UBERON:0004732!1.79e-07!13;UBERON:0000483!2.47e-07!309;UBERON:0000119!3.57e-07!312;UBERON:0000477!7.77e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.52e-10;10!UBERON:0000013;2.31e-09;5!UBERON:0002410;2.31e-09;5!UBERON:0001872;2.62e-09;5!UBERON:0000178;7.05e-07;15!UBERON:0000179;7.05e-07;15!UBERON:0000463;7.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.52e-10,10;UBERON:0000358,4.52e-10,10;UBERON:0000307,4.52e-10,10;UBERON:0000091,4.52e-10,10;UBERON:0000087,4.52e-10,10;UBERON:0007010,4.52e-10,10;UBERON:0007806,4.52e-10,10;UBERON:0008780,4.52e-10,10;UBERON:0005728,4.52e-10,10;UBERON:0000013,2.68e-09,5;UBERON:0002410,2.68e-09,5;UBERON:0001872,3.17e-09,5;UBERON:0000178,7.05e-07,15;UBERON:0000179,7.05e-07,15;UBERON:0000463,7.05e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,2.21598876669059,1.72411237844886,1.49550484495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,2.47127877893006,1.25306339406546,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,6.00582492516876,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.31443677139657,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,3.12691953050377,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0.615349092722265,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,2.34323429584154,0,0.253663240775627,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,0,0.691403925334676,0,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25212336732527,0,0,0,0,8.15199355260037,0,0,15.0501534835687,0,0.942706188406504,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,2.49852889812322,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ASCL1 | |||
}} |
Revision as of 15:32, 11 January 2014
Short description: | p6@ASCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ASCL1_5end |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | 230bp_to_ENST00000266744_5end |
EntrezGene: | ASCL1 |
HGNC: | 738 |
UniProt: | P50553 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.52e-10 | 10 |
blastocyst | 4.52e-10 | 10 |
blastula | 4.52e-10 | 10 |
bilaminar disc | 4.52e-10 | 10 |
inner cell mass | 4.52e-10 | 10 |
cleaving embryo | 4.52e-10 | 10 |
connecting stalk | 4.52e-10 | 10 |
inner cell mass derived epiblast | 4.52e-10 | 10 |
extraembryonic mesoderm | 4.52e-10 | 10 |
sympathetic nervous system | 2.68e-09 | 5 |
autonomic nervous system | 2.68e-09 | 5 |
parietal lobe | 3.17e-09 | 5 |
blood | 7.05e-07 | 15 |
haemolymphatic fluid | 7.05e-07 | 15 |
organism substance | 7.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.84e-08 | 6 |