FFCP PHASE1:Hg19::chr12:96794114..96794135,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5128 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8750 | |||
|TSSclassifier=strong | |||
|UniProt=Q00537 | |||
|association_with_transcript=87bp_to_uc001tep.1,uc009ztk.2,uc010svb.1_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_4_at_CDK17_5end | |||
|id=chr12:96794114..96794135,- | |||
|ontology_enrichment_celltype=CL:0000738!5.01e-17!140;CL:0000791!7.37e-12!18;CL:0000789!7.37e-12!18;CL:0002420!7.37e-12!18;CL:0002419!7.37e-12!18;CL:0000790!7.37e-12!18;CL:0002087!3.64e-10!119;CL:0002031!3.89e-10!124;CL:0000037!7.71e-09!172;CL:0000566!7.71e-09!172;CL:0000084!1.97e-08!25;CL:0000827!1.97e-08!25;CL:0000625!3.96e-08!11;CL:0000988!5.35e-08!182;CL:0000766!1.01e-07!76;CL:0002032!6.33e-07!165;CL:0000837!6.33e-07!165;CL:0002057!6.81e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.48e-15;18!CL:0000789;7.48e-15;18!CL:0002419;7.48e-15;18!CL:0000625;3.49e-10;11!CL:0000084;3.99e-10;25!CL:0000094;4.59e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.01e-20,136;CL:0000791,6.16e-15,18;CL:0000789,6.16e-15,18;CL:0002420,6.16e-15,18;CL:0002419,6.16e-15,18;CL:0000790,6.16e-15,18;CL:0000037,1.89e-12,168;CL:0002031,3.94e-12,120;CL:0002087,6.80e-12,115;CL:0000988,4.17e-11,177;CL:0000625,4.28e-10,11;CL:0000084,5.45e-10,25;CL:0000827,5.45e-10,25;CL:0002032,8.76e-10,161;CL:0000837,8.76e-10,161;CL:0000766,2.00e-09,72;CL:0000094,5.70e-08,8;CL:0000860,1.52e-07,42;CL:0002057,1.52e-07,42;CL:0000838,2.53e-07,52;CL:0000542,5.52e-07,53;CL:0000051,5.52e-07,53;CL:0000557,9.47e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;7.48e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.52e-13!32;UBERON:0001893!5.42e-13!34;UBERON:0002791!1.92e-12!33;UBERON:0002020!1.06e-11!34;UBERON:0003528!1.06e-11!34;UBERON:0001049!3.58e-11!57;UBERON:0005068!3.58e-11!57;UBERON:0006241!3.58e-11!57;UBERON:0007135!3.58e-11!57;UBERON:0002780!3.80e-11!41;UBERON:0001890!3.80e-11!41;UBERON:0006240!3.80e-11!41;UBERON:0003080!5.94e-11!42;UBERON:0002616!1.80e-10!59;UBERON:0002619!2.10e-10!22;UBERON:0000956!7.67e-10!25;UBERON:0000203!7.67e-10!25;UBERON:0001950!1.33e-09!20;UBERON:0000955!7.78e-09!69;UBERON:0006238!7.78e-09!69;UBERON:0002193!1.04e-08!112;UBERON:0002390!1.14e-08!102;UBERON:0003061!1.14e-08!102;UBERON:0001637!2.66e-08!42;UBERON:0003509!2.66e-08!42;UBERON:0004572!2.66e-08!42;UBERON:0007023!6.58e-08!115;UBERON:0004573!1.46e-07!33;UBERON:0004571!1.46e-07!33;UBERON:0001017!3.39e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.05e-13;32!UBERON:0001893;8.62e-13;34!UBERON:0002619;9.08e-13;22!UBERON:0002791;1.50e-12;32!UBERON:0001950;1.08e-11;20!UBERON:0003528;2.93e-11;34!UBERON:0002020;2.93e-11;34!UBERON:0000956;3.58e-11;25!UBERON:0000203;3.58e-11;25!UBERON:0002780;8.26e-10;41!UBERON:0001890;8.26e-10;41!UBERON:0000073;2.43e-07;53!UBERON:0002616;2.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.15e-15,32;UBERON:0001893,6.55e-15,34;UBERON:0002791,7.26e-14,32;UBERON:0002780,9.73e-14,41;UBERON:0001890,9.73e-14,41;UBERON:0003080,9.73e-14,41;UBERON:0006240,9.73e-14,41;UBERON:0001049,5.01e-13,56;UBERON:0005068,5.01e-13,56;UBERON:0006241,5.01e-13,56;UBERON:0007135,5.01e-13,56;UBERON:0002619,1.12e-12,22;UBERON:0000073,1.13e-12,53;UBERON:0002616,1.13e-12,53;UBERON:0003528,2.17e-12,34;UBERON:0002020,2.17e-12,34;UBERON:0001950,1.23e-11,20;UBERON:0000956,3.96e-11,25;UBERON:0000203,3.96e-11,25;UBERON:0003081,2.44e-10,203;UBERON:0000955,4.48e-10,68;UBERON:0006238,4.48e-10,68;UBERON:0002390,6.16e-10,98;UBERON:0003061,6.16e-10,98;UBERON:0002193,7.15e-10,108;UBERON:0001016,1.37e-09,89;UBERON:0001637,3.51e-09,42;UBERON:0003509,3.51e-09,42;UBERON:0004572,3.51e-09,42;UBERON:0001017,4.48e-09,81;UBERON:0003075,1.24e-08,82;UBERON:0007284,1.24e-08,82;UBERON:0003056,2.14e-08,61;UBERON:0002346,2.99e-08,86;UBERON:0007023,4.20e-08,114;UBERON:0004573,7.72e-08,33;UBERON:0004571,7.72e-08,33;UBERON:0000025,8.29e-08,192;UBERON:0007500,3.23e-07,59;UBERON:0001981,3.23e-07,59;UBERON:0004537,3.23e-07,59;UBERON:0006965,3.23e-07,59;UBERON:0000055,5.67e-07,68;UBERON:0004535,6.15e-07,109;UBERON:0004111,6.82e-07,240;UBERON:0002405,9.41e-07,93 | |||
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| |||
|short_description=p4@CDK17 | |||
}} |
Revision as of 15:21, 11 January 2014
Short description: | p4@CDK17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDK17_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 87bp_to_uc001tep.1, uc009ztk.2, uc010svb.1_5end |
EntrezGene: | CDK17 |
HGNC: | 8750 |
UniProt: | Q00537 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.01e-20 | 136 |
mature alpha-beta T cell | 6.16e-15 | 18 |
alpha-beta T cell | 6.16e-15 | 18 |
immature T cell | 6.16e-15 | 18 |
mature T cell | 6.16e-15 | 18 |
immature alpha-beta T cell | 6.16e-15 | 18 |
hematopoietic stem cell | 1.89e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 3.94e-12 | 120 |
nongranular leukocyte | 6.80e-12 | 115 |
hematopoietic cell | 4.17e-11 | 177 |
CD8-positive, alpha-beta T cell | 4.28e-10 | 11 |
T cell | 5.45e-10 | 25 |
pro-T cell | 5.45e-10 | 25 |
hematopoietic oligopotent progenitor cell | 8.76e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.76e-10 | 161 |
myeloid leukocyte | 2.00e-09 | 72 |
granulocyte | 5.70e-08 | 8 |
classical monocyte | 1.52e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-07 | 42 |
lymphoid lineage restricted progenitor cell | 2.53e-07 | 52 |
lymphocyte | 5.52e-07 | 53 |
common lymphoid progenitor | 5.52e-07 | 53 |
granulocyte monocyte progenitor cell | 9.47e-07 | 67 |