FFCP PHASE1:Hg19::chr12:95611516..95611527,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18258 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBM0 | |||
|association_with_transcript=0bp_to_ENST00000436874,ENST00000549589,ENST00000550803,NM_017599,NR_038241,NR_038242,uc001tdr.2,uc001tds.2,uc001tdt.2,uc001tdv.2,uc001tdz.2,uc009zsy.1,uc009zsz.1_5end | |||
|description=CAGE_peak_2_at_VEZT_5end | |||
|id=chr12:95611516..95611527,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-13!115;UBERON:0001049!3.31e-11!57;UBERON:0005068!3.31e-11!57;UBERON:0006241!3.31e-11!57;UBERON:0007135!3.31e-11!57;UBERON:0000073!4.67e-11!94;UBERON:0001016!4.67e-11!94;UBERON:0001017!1.73e-10!82;UBERON:0005743!6.30e-10!86;UBERON:0002616!2.30e-09!59;UBERON:0002346!2.33e-09!90;UBERON:0003080!5.19e-09!42;UBERON:0002780!6.89e-09!41;UBERON:0001890!6.89e-09!41;UBERON:0006240!6.89e-09!41;UBERON:0003075!1.42e-08!86;UBERON:0007284!1.42e-08!86;UBERON:0000955!3.20e-08!69;UBERON:0006238!3.20e-08!69;UBERON:0002020!1.19e-07!34;UBERON:0003528!1.19e-07!34;UBERON:0001893!1.88e-07!34;UBERON:0000924!1.99e-07!173;UBERON:0006601!1.99e-07!173;UBERON:0002791!2.45e-07!33;UBERON:0004111!3.00e-07!241;UBERON:0001869!3.93e-07!32;UBERON:0002619!6.80e-07!22;UBERON:0004121!8.19e-07!169;UBERON:0000477!9.30e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.37e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.23e-13,114;UBERON:0001016,3.90e-11,89;UBERON:0001049,4.33e-11,56;UBERON:0005068,4.33e-11,56;UBERON:0006241,4.33e-11,56;UBERON:0007135,4.33e-11,56;UBERON:0001017,5.84e-10,81;UBERON:0000073,8.51e-10,53;UBERON:0002616,8.51e-10,53;UBERON:0002346,4.61e-09,86;UBERON:0002780,5.81e-09,41;UBERON:0001890,5.81e-09,41;UBERON:0003080,5.81e-09,41;UBERON:0006240,5.81e-09,41;UBERON:0010371,8.83e-09,104;UBERON:0003075,2.97e-08,82;UBERON:0007284,2.97e-08,82;UBERON:0010314,1.07e-07,132;UBERON:0003528,1.15e-07,34;UBERON:0002020,1.15e-07,34;UBERON:0000955,1.24e-07,68;UBERON:0006238,1.24e-07,68;UBERON:0001893,1.83e-07,34;UBERON:0004111,1.85e-07,240;UBERON:0002791,2.47e-07,32;UBERON:0002619,3.80e-07,22;UBERON:0001869,3.96e-07,32;UBERON:0004121,4.65e-07,171;UBERON:0000924,4.65e-07,171;UBERON:0006601,4.65e-07,171;UBERON:0001950,9.37e-07,20 | |||
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| |||
|short_description=p2@VEZT | |||
}} |
Revision as of 15:17, 11 January 2014
Short description: | p2@VEZT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VEZT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436874, ENST00000549589, ENST00000550803, NM_017599, NR_038241, NR_038242, uc001tdr.2, uc001tds.2, uc001tdt.2, uc001tdv.2, uc001tdz.2, uc009zsy.1, uc009zsz.1_5end |
EntrezGene: | VEZT |
HGNC: | 18258 |
UniProt: | Q9HBM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.23e-13 | 114 |
nervous system | 3.90e-11 | 89 |
neural tube | 4.33e-11 | 56 |
neural rod | 4.33e-11 | 56 |
future spinal cord | 4.33e-11 | 56 |
neural keel | 4.33e-11 | 56 |
central nervous system | 5.84e-10 | 81 |
regional part of nervous system | 8.51e-10 | 53 |
regional part of brain | 8.51e-10 | 53 |
neurectoderm | 4.61e-09 | 86 |
regional part of forebrain | 5.81e-09 | 41 |
forebrain | 5.81e-09 | 41 |
anterior neural tube | 5.81e-09 | 41 |
future forebrain | 5.81e-09 | 41 |
ecto-epithelium | 8.83e-09 | 104 |
neural plate | 2.97e-08 | 82 |
presumptive neural plate | 2.97e-08 | 82 |
structure with developmental contribution from neural crest | 1.07e-07 | 132 |
brain grey matter | 1.15e-07 | 34 |
gray matter | 1.15e-07 | 34 |
brain | 1.24e-07 | 68 |
future brain | 1.24e-07 | 68 |
telencephalon | 1.83e-07 | 34 |
anatomical conduit | 1.85e-07 | 240 |
regional part of telencephalon | 2.47e-07 | 32 |
regional part of cerebral cortex | 3.80e-07 | 22 |
cerebral hemisphere | 3.96e-07 | 32 |
ectoderm-derived structure | 4.65e-07 | 171 |
ectoderm | 4.65e-07 | 171 |
presumptive ectoderm | 4.65e-07 | 171 |
neocortex | 9.37e-07 | 20 |