FFCP PHASE1:Hg19::chr12:92860585..92860604,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=130bp_to_uc001tcg.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_uc001tcg.1_5end | |||
|id=chr12:92860585..92860604,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.12e-28!24;CL:0000826!4.12e-28!24;CL:0000236!5.50e-21!14;CL:0002087!2.05e-14!119;CL:0000542!1.56e-13!53;CL:0000051!1.56e-13!53;CL:0000738!5.91e-13!140;CL:0000838!1.24e-12!52;CL:0002031!7.39e-11!124;CL:0000037!1.90e-08!172;CL:0000566!1.90e-08!172;CL:0000988!2.94e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.15e-48;24!CL:0000236;1.58e-31;13!CL:0000542;7.90e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.83e-49,24;CL:0000826,8.83e-49,24;CL:0000236,6.76e-34,14;CL:0000542,8.81e-21,53;CL:0000051,8.81e-21,53;CL:0000838,3.49e-19,52;CL:0002087,1.62e-13,115;CL:0000738,3.42e-11,136;CL:0002031,1.11e-09,120;CL:0000037,1.22e-07,168;CL:0000988,6.82e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.90e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-37!115;UBERON:0001049!5.08e-13!57;UBERON:0005068!5.08e-13!57;UBERON:0006241!5.08e-13!57;UBERON:0007135!5.08e-13!57;UBERON:0000178!1.69e-12!15;UBERON:0000179!1.69e-12!15;UBERON:0000463!1.69e-12!15;UBERON:0002616!2.99e-11!59;UBERON:0001017!3.61e-11!82;UBERON:0005743!6.15e-11!86;UBERON:0002780!3.63e-10!41;UBERON:0001890!3.63e-10!41;UBERON:0006240!3.63e-10!41;UBERON:0003080!8.80e-10!42;UBERON:0000955!9.18e-10!69;UBERON:0006238!9.18e-10!69;UBERON:0001893!1.35e-09!34;UBERON:0002791!4.62e-09!33;UBERON:0000073!5.68e-09!94;UBERON:0001016!5.68e-09!94;UBERON:0002020!7.87e-09!34;UBERON:0003528!7.87e-09!34;UBERON:0003075!3.23e-08!86;UBERON:0007284!3.23e-08!86;UBERON:0001869!3.73e-08!32;UBERON:0002619!4.66e-08!22;UBERON:0002390!5.07e-08!102;UBERON:0003061!5.07e-08!102;UBERON:0002193!8.32e-08!112;UBERON:0001950!1.12e-07!20;UBERON:0002346!1.79e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-20;15!UBERON:0000179;3.36e-20;15!UBERON:0000463;3.36e-20;15!UBERON:0002390;1.15e-14;32!UBERON:0002193;3.81e-10;42!UBERON:0002106;5.68e-09;3!UBERON:0004177;7.61e-09;5!UBERON:0005057;7.61e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.02e-20,15;UBERON:0000179,4.02e-20,15;UBERON:0000463,4.02e-20,15;UBERON:0007023,2.88e-19,114;UBERON:0002106,7.66e-09,3;UBERON:0004854,7.66e-09,3;UBERON:0009034,7.66e-09,3;UBERON:0002095,7.66e-09,3;UBERON:0004782,7.66e-09,3;UBERON:0003281,7.66e-09,3;UBERON:0009664,7.66e-09,3;UBERON:0002296,7.66e-09,3;UBERON:0005602,7.66e-09,3;UBERON:0001179,7.66e-09,3;UBERON:0006293,7.66e-09,3;UBERON:0002193,4.89e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41872608282791,6.07544361929599,7.39881344348585,0,0,0,0,0,0,7.97912165977107,9.52533857665724,0,0,0,0,0,1.6194683300949,0,0,0,0,0,1.23350366406548,0,0,0.256160706529101,0.236482229888585,0,1.29096936716765,0,0,0.272906150057846,0,0,1.28371610830437,0,0,0.398927315243264,0.426224750532694,0,0.56738522469114,0.622822248995575,0,1.0429658368404,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,91.5180471198878,108.681583641164,122.752277033171,78.5183609522373,118.917608149696,118.399002630624,110.394493755072,114.486450544244,33.5835651774575,19.378827249241,18.349114950011,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0.953962497221368,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.07857100409308,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.870036464629098,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.58192370155386,9.1756464857085,10.2536493691349,17.1526878329608,18.0999400157925,9.72709966789076,5.94034580961926,3.96562588147135,0,0,0,13.7494349593032,0.577076851905779,0,0,0,0,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0.597743964753209,14.919331438682,0,0,1.47701766553283,0,0,0,0,1.1837208676432,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,1.4471572635049,3.05163472634166,1.76926815889959,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,1.22206028986725,0,0,0,0.471807930864739,1.60515529459758,0.234264445725339,13.8665639803906,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.64881328030313,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,1.9166753044879,0,0,0,0.558564802544508,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0,2.04305109167363,0.160753148465019,0,0,0.674921674654501,0,0.121499113316049,0,0.709251365692784,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11572162788304,0,0,0.427149650270779,0.628817220398664,1.65695622138878,14.3888146325466,0,3.41019275466509,0,0,0,0,0,0,0,0,0.500763722825999,0,3.32787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.27707087245721,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,1.03343398250592,0.0634158101939068,0.546974809018219,1.09651553371436,0.496211178389294,0,0,0,1.3451348888753,0,0,0,2.65038171378292,0,0.40781839786099,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.428859265059938,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.617393264863557,0.437119121007915,0,0.245148321753905,0,0.196308467114945,5.64388160621463,0,0,19.26670318587,9.02410431630081,1.09935271517422,0,0,0,0,1.83491713361816,1.57673541466596,0,0.203974470572744,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,2.79269088827117,1.0661699095049,0.952257725854961,0.904244737704086,1.30356900021302,0,0.12729431655633,0,0.435433495793923,2.05339980651169,16.8380132536469,2.07994395638761,0,0,0,0,0,0,0,0,0,19.5235579783295,18.5929725535875 | |||
|short_description=p1@uc001tcg.1 | |||
}} |
Revision as of 15:10, 11 January 2014
Short description: | p1@uc001tcg.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001tcg.1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 130bp_to_uc001tcg.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.83e-49 | 24 |
pro-B cell | 8.83e-49 | 24 |
B cell | 6.76e-34 | 14 |
lymphocyte | 8.81e-21 | 53 |
common lymphoid progenitor | 8.81e-21 | 53 |
lymphoid lineage restricted progenitor cell | 3.49e-19 | 52 |
nongranular leukocyte | 1.62e-13 | 115 |
leukocyte | 3.42e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.11e-09 | 120 |
hematopoietic stem cell | 1.22e-07 | 168 |
hematopoietic cell | 6.82e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.02e-20 | 15 |
haemolymphatic fluid | 4.02e-20 | 15 |
organism substance | 4.02e-20 | 15 |
adult organism | 2.88e-19 | 114 |
spleen | 7.66e-09 | 3 |
gastrointestinal system mesentery | 7.66e-09 | 3 |
stomach region | 7.66e-09 | 3 |
mesentery | 7.66e-09 | 3 |
gastrointestinal system serosa | 7.66e-09 | 3 |
mesentery of stomach | 7.66e-09 | 3 |
gut mesentery | 7.66e-09 | 3 |
dorsal mesentery | 7.66e-09 | 3 |
dorsal mesogastrium | 7.66e-09 | 3 |
peritoneal cavity | 7.66e-09 | 3 |
spleen primordium | 7.66e-09 | 3 |
hemolymphoid system | 4.89e-07 | 108 |