FFCP PHASE1:Hg19::chr12:90341993..90342017,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr12:90341993..90342017,+ | |||
|id=chr12:90341993..90342017,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.66e-52!45;CL:0002057!7.37e-51!42;CL:0000738!8.42e-42!140;CL:0002009!5.75e-41!65;CL:0002194!1.30e-37!63;CL:0000576!1.30e-37!63;CL:0000040!1.30e-37!63;CL:0000559!1.30e-37!63;CL:0000557!1.69e-36!71;CL:0000766!1.99e-35!76;CL:0002087!4.64e-35!119;CL:0000839!1.00e-32!70;CL:0000037!3.64e-32!172;CL:0000566!3.64e-32!172;CL:0000988!6.43e-32!182;CL:0002031!1.54e-31!124;CL:0002032!4.71e-26!165;CL:0000837!4.71e-26!165;CL:0000763!8.83e-26!112;CL:0000049!8.83e-26!112;CL:0000134!3.53e-20!358;CL:0002320!2.20e-19!365;CL:0000219!2.79e-17!390;CL:0000034!3.05e-16!444;CL:0000723!1.09e-14!436;CL:0000048!1.46e-14!430;CL:0000451!9.00e-09!10;CL:0000063!9.54e-09!578;CL:0002393!2.94e-08!9;CL:0002397!2.94e-08!9;CL:0000767!1.09e-07!3;CL:0000144!1.87e-07!625;CL:0000453!2.88e-07!5;CL:0000842!3.02e-07!3;CL:0000623!3.80e-07!3;CL:0000825!3.80e-07!3;CL:0000784!4.48e-07!3;CL:0000012!9.68e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-44;33!CL:0002057;3.46e-44;33!CL:0000473;4.34e-30;39!CL:0000234;4.34e-30;39!CL:0000576;4.76e-27;48!CL:0000766;1.63e-18;69!CL:0000767;7.41e-17;3!CL:0000226;8.01e-16;3!CL:0000842;8.01e-16;3!CL:0002087;1.32e-15;104!CL:0001014;6.85e-12;2!CL:0001016;6.85e-12;2!CL:0002393;4.43e-09;6!CL:0002397;4.43e-09;6!CL:0000763;8.58e-09;100!CL:0000840;1.25e-08;5!CL:0000451;6.97e-08;10!CL:0000738;7.40e-08;136!CL:0000784;7.86e-08;3!CL:0000623;1.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.75e-52,42;CL:0002057,2.75e-52,42;CL:0000473,3.66e-45,48;CL:0000234,3.66e-45,48;CL:0002009,4.54e-45,61;CL:0000738,3.63e-41,136;CL:0000766,6.47e-41,72;CL:0000557,1.26e-40,67;CL:0002194,8.42e-39,59;CL:0000576,8.42e-39,59;CL:0000040,8.42e-39,59;CL:0000559,8.42e-39,59;CL:0000037,2.63e-34,168;CL:0000839,3.11e-34,66;CL:0002087,1.25e-32,115;CL:0000988,3.10e-32,177;CL:0000763,1.82e-30,108;CL:0000049,1.82e-30,108;CL:0002031,6.71e-29,120;CL:0002032,1.26e-25,161;CL:0000837,1.26e-25,161;CL:0000767,7.62e-17,3;CL:0000226,9.62e-16,3;CL:0000842,9.62e-16,3;CL:0000134,8.91e-13,354;CL:0002320,2.14e-12,361;CL:0001014,6.85e-12,2;CL:0001016,6.85e-12,2;CL:0000219,4.73e-11,386;CL:0000034,1.22e-10,441;CL:0000048,2.10e-09,427;CL:0000723,3.54e-09,433;CL:0000840,1.28e-08,5;CL:0001029,1.28e-08,5;CL:0000451,7.57e-08,10;CL:0000784,9.19e-08,3;CL:0000623,1.17e-07,3;CL:0000825,1.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.56e-36;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.05e-35!80;UBERON:0001474!2.68e-33!86;UBERON:0002390!2.05e-29!102;UBERON:0003061!2.05e-29!102;UBERON:0004765!1.78e-26!101;UBERON:0001434!1.78e-26!101;UBERON:0002193!1.30e-25!112;UBERON:0002405!6.14e-23!115;UBERON:0002384!2.67e-18!375;UBERON:0002204!7.90e-13!167;UBERON:0003081!1.72e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-38,76;UBERON:0002390,1.25e-36,98;UBERON:0003061,1.25e-36,98;UBERON:0001474,2.71e-35,82;UBERON:0002193,9.97e-33,108;UBERON:0004765,1.04e-31,90;UBERON:0002405,1.60e-30,93;UBERON:0001434,4.99e-28,100;UBERON:0003081,1.02e-14,203;UBERON:0002204,1.14e-14,167;UBERON:0002384,7.10e-12,371;UBERON:0000926,2.07e-07,315;UBERON:0004120,2.07e-07,315;UBERON:0006603,2.07e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,5.37361157336098,6.03782880932696,0,0,0,0,0,1.76160263600908,28.8077612436576,12.6343001906189,12.5866305015194,0,0,0,0.145398238779565,0,0.242584061187816,0.929716147622738,0,1.54853185447552,1.43846196161075,0.512321413058201,3.31075121844019,9.3081333798887,8.39130088658974,10.8341189275473,0.188242339542605,0.272906150057846,1.34834090667051,23.5684597125595,7.70229664982625,14.7047538933779,0,0,0,15.6712988859435,2.8369261234557,7.4738669879469,0.502497330513487,1.0429658368404,1.52032191293582,3.02699751316684,9.57521853567668,18.6712808590122,0.211255286311942,0.425208599930087,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,2.93618594685469,0,1.32171328579026,5.60508562981536,0.263384084775077,1.180258620683,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14641561874808,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,1.37921532141349,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.44737618286021,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,3.82455615637551,9.2856234546954,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.930053882193542,0.327130788511688,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:90341993..90342017,+ | |||
}} |
Revision as of 15:07, 11 January 2014
Short description: | p@chr12:90341993..90342017, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:90341993..90342017, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-38 | 76 |
hematopoietic system | 1.25e-36 | 98 |
blood island | 1.25e-36 | 98 |
bone element | 2.71e-35 | 82 |
hemolymphoid system | 9.97e-33 | 108 |
skeletal element | 1.04e-31 | 90 |
immune system | 1.60e-30 | 93 |
skeletal system | 4.99e-28 | 100 |
lateral plate mesoderm | 1.02e-14 | 203 |
musculoskeletal system | 1.14e-14 | 167 |
connective tissue | 7.10e-12 | 371 |
mesoderm | 2.07e-07 | 315 |
mesoderm-derived structure | 2.07e-07 | 315 |
presumptive mesoderm | 2.07e-07 | 315 |