FFCP PHASE1:Hg19::chr12:81172256..81172287,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C205 | |||
|description=CAGE_peak_at_chr12:81172256..81172287,+ | |||
|id=chr12:81172256..81172287,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.78e-08!24;CL:0000826!6.78e-08!24;CL:0000542!4.77e-07!53;CL:0000051!4.77e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.62e-23;24!CL:0000946;2.05e-13;1!CL:0000786;2.05e-13;1!CL:0000222;6.82e-13;1!CL:0000319;9.73e-13;1!CL:0000542;1.37e-09;53!CL:0000159;5.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.71e-23,24;CL:0000826,1.71e-23,24;CL:0000838,2.53e-17,52;CL:0000542,5.62e-17,53;CL:0000051,5.62e-17,53;CL:0000946,2.06e-13,1;CL:0000786,2.06e-13,1;CL:0000980,2.06e-13,1;CL:0000319,8.64e-13,1;CL:0000988,5.95e-08,177;CL:0000785,2.43e-07,2;CL:0000955,2.43e-07,2;CL:0000818,2.43e-07,2;CL:0000954,2.43e-07,2;CL:0000816,2.43e-07,2;CL:0002087,3.66e-07,115;CL:0000159,4.98e-07,2;CL:0002031,8.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.37e-09;53!CL:0000954;2.43e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.92e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.61e-13;1!DOID:0060061;1.61e-13;1!DOID:8691;1.61e-13;1!DOID:630;2.78e-13;1!DOID:0050177;2.78e-13;1!DOID:0050427;2.78e-13;1!DOID:4960;5.38e-13;1!DOID:0070004;5.38e-13;1!DOID:3030;9.73e-13;1!DOID:0060058;4.02e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.61e-13,1;DOID:0060061,1.61e-13,1;DOID:8691,1.61e-13,1;DOID:630,2.95e-13,1;DOID:0050177,2.95e-13,1;DOID:0050427,2.95e-13,1;DOID:4960,5.38e-13,1;DOID:0070004,5.38e-13,1;DOID:3030,8.64e-13,1;DOID:0060058,4.31e-11,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;9.73e-13;1!UBERON:0002390;1.72e-12;32!UBERON:0002331;2.51e-11;10!UBERON:0000178;1.01e-07;15!UBERON:0000179;1.01e-07;15!UBERON:0000463;1.01e-07;15!UBERON:0002193;3.89e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.73e-13,1;UBERON:0002331,2.38e-11,10;UBERON:0000358,2.38e-11,10;UBERON:0000307,2.38e-11,10;UBERON:0000091,2.38e-11,10;UBERON:0000087,2.38e-11,10;UBERON:0007010,2.38e-11,10;UBERON:0007806,2.38e-11,10;UBERON:0008780,2.38e-11,10;UBERON:0005728,2.38e-11,10;UBERON:0000178,9.72e-08,15;UBERON:0000179,9.72e-08,15;UBERON:0000463,9.72e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,10.4686365874693,10.7551772179429,9.20916141370047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.649094787309367,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.184099797284599,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,2.22886768554957,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,7.50817313312524,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.7338312432033,10.9971905662388,8.45817790994189,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,1.96618327002975,0,76.5951726124381,0,5.68309432880692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3143713742694,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,1.09935271517422,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,10.5787602460067 | |||
|short_description=p@chr12:81172256..81172287,+ | |||
}} |
Revision as of 14:55, 11 January 2014
Short description: | p@chr12:81172256..81172287, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:81172256..81172287, + |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.71e-23 | 24 |
pro-B cell | 1.71e-23 | 24 |
lymphoid lineage restricted progenitor cell | 2.53e-17 | 52 |
lymphocyte | 5.62e-17 | 53 |
common lymphoid progenitor | 5.62e-17 | 53 |
antibody secreting cell | 2.06e-13 | 1 |
plasma cell | 2.06e-13 | 1 |
plasmablast | 2.06e-13 | 1 |
mucus secreting cell | 8.64e-13 | 1 |
hematopoietic cell | 5.95e-08 | 177 |
mature B cell | 2.43e-07 | 2 |
pre-B-II cell | 2.43e-07 | 2 |
transitional stage B cell | 2.43e-07 | 2 |
small pre-B-II cell | 2.43e-07 | 2 |
immature B cell | 2.43e-07 | 2 |
nongranular leukocyte | 3.66e-07 | 115 |
seromucus secreting cell | 4.98e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 8.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.73e-13 | 1 |
umbilical cord | 2.38e-11 | 10 |
blastocyst | 2.38e-11 | 10 |
blastula | 2.38e-11 | 10 |
bilaminar disc | 2.38e-11 | 10 |
inner cell mass | 2.38e-11 | 10 |
cleaving embryo | 2.38e-11 | 10 |
connecting stalk | 2.38e-11 | 10 |
inner cell mass derived epiblast | 2.38e-11 | 10 |
extraembryonic mesoderm | 2.38e-11 | 10 |
blood | 9.72e-08 | 15 |
haemolymphatic fluid | 9.72e-08 | 15 |
organism substance | 9.72e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.61e-13 | 1 |
cutaneous T cell lymphoma | 1.61e-13 | 1 |
mycosis fungoides | 1.61e-13 | 1 |
genetic disease | 2.95e-13 | 1 |
monogenic disease | 2.95e-13 | 1 |
xeroderma pigmentosum | 2.95e-13 | 1 |
bone marrow cancer | 5.38e-13 | 1 |
myeloma | 5.38e-13 | 1 |
mucinous adenocarcinoma | 8.64e-13 | 1 |
lymphoma | 4.31e-11 | 10 |