FFCP PHASE1:Hg19::chr12:46661143..46661186,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |||
|TSSclassifier=strong | |||
|UniProt=F8VX04 | |||
|association_with_transcript=297bp_to_ENST00000552197,uc009zkj.1_5end | |||
|description=CAGE_peak_12_at_SLC38A1_5end | |||
|id=chr12:46661143..46661186,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.81e-07,6;CL:0000031,8.81e-07,6;CL:0000404,8.81e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.54e-20!94;UBERON:0001016!8.54e-20!94;UBERON:0001017!1.79e-19!82;UBERON:0005743!4.17e-19!86;UBERON:0004121!2.28e-15!169;UBERON:0001049!6.69e-15!57;UBERON:0005068!6.69e-15!57;UBERON:0006241!6.69e-15!57;UBERON:0007135!6.69e-15!57;UBERON:0000924!1.35e-14!173;UBERON:0006601!1.35e-14!173;UBERON:0003075!3.36e-14!86;UBERON:0007284!3.36e-14!86;UBERON:0000955!4.32e-14!69;UBERON:0006238!4.32e-14!69;UBERON:0000064!4.11e-13!219;UBERON:0002346!4.79e-13!90;UBERON:0002616!9.98e-13!59;UBERON:0002780!2.32e-12!41;UBERON:0001890!2.32e-12!41;UBERON:0006240!2.32e-12!41;UBERON:0000153!1.29e-11!129;UBERON:0007811!1.29e-11!129;UBERON:0003080!1.42e-11!42;UBERON:0001893!5.30e-11!34;UBERON:0000033!6.76e-11!123;UBERON:0002020!1.12e-10!34;UBERON:0003528!1.12e-10!34;UBERON:0002791!1.84e-10!33;UBERON:0007023!2.68e-10!115;UBERON:0001869!2.88e-10!32;UBERON:0003056!4.09e-10!61;UBERON:0002619!2.25e-08!22;UBERON:0000956!4.85e-08!25;UBERON:0000203!4.85e-08!25;UBERON:0001950!1.04e-07!20;UBERON:0000468!9.47e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.06e-08;34!UBERON:0002020;1.06e-08;34!UBERON:0002619;1.21e-08;22!UBERON:0001893;1.22e-08;34!UBERON:0001869;1.67e-08;32!UBERON:0002791;1.80e-08;32!UBERON:0000073;2.29e-08;53!UBERON:0002616;2.29e-08;53!UBERON:0001950;1.11e-07;20!UBERON:0002780;1.83e-07;41!UBERON:0001890;1.83e-07;41!UBERON:0001017;4.11e-07;75!UBERON:0000956;4.35e-07;25!UBERON:0000203;4.35e-07;25!UBERON:0001016;9.84e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-21,89;UBERON:0001017,5.24e-20,81;UBERON:0004121,3.67e-16,171;UBERON:0000924,3.67e-16,171;UBERON:0006601,3.67e-16,171;UBERON:0001049,5.16e-16,56;UBERON:0005068,5.16e-16,56;UBERON:0006241,5.16e-16,56;UBERON:0007135,5.16e-16,56;UBERON:0003075,4.43e-14,82;UBERON:0007284,4.43e-14,82;UBERON:0000073,7.35e-14,53;UBERON:0002616,7.35e-14,53;UBERON:0000955,1.92e-13,68;UBERON:0006238,1.92e-13,68;UBERON:0002346,9.14e-13,86;UBERON:0007023,7.27e-12,114;UBERON:0011216,4.15e-11,223;UBERON:0001893,7.88e-11,34;UBERON:0002780,1.56e-10,41;UBERON:0001890,1.56e-10,41;UBERON:0003080,1.56e-10,41;UBERON:0006240,1.56e-10,41;UBERON:0010371,1.72e-10,104;UBERON:0003528,2.05e-10,34;UBERON:0002020,2.05e-10,34;UBERON:0010314,8.55e-10,132;UBERON:0001869,9.74e-10,32;UBERON:0002791,1.68e-09,32;UBERON:0002619,3.46e-09,22;UBERON:0003056,4.08e-09,61;UBERON:0001950,3.90e-08,20;UBERON:0000956,1.52e-07,25;UBERON:0000203,1.52e-07,25;UBERON:0003076,4.98e-07,15;UBERON:0003057,4.98e-07,15;UBERON:0005631,9.50e-07,14;UBERON:0000158,9.50e-07,14 | |||
|phase1_expression=0.908391896352783,1.2846031433459,2.11431606143957,1.0007329835313,2.23480547213644,1.74467704820074,0,0,0,0,0,1.31064823278103,1.58260186937072,0.866364470720326,0.662794751455832,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0.547497700291537,0.753255837568817,0.229240217243854,0.164201178899891,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.142169232487422,0.880801318004542,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0.526768169550154,0.983548850569165,0,0.822405995998037,0,0,0.473447805734733,0,0.111410456885174,0.589211814949674,0.443067789167242,0.812411591295047,0.128091319725675,0,0.493313713811028,0,0,0.741432815810302,0.535081656179426,0,0.339928028092699,0.383220493601921,1.03088233644789,0.253019692019503,0.318565414324097,0,0.950452044448374,0.602300476311091,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0.534880391567015,0.724122019413995,0,0.670700859703636,0.383587685530591,0.361439152384566,1.50401373190767,0.144846518960824,0,0,3.11964896641424,1.10864698731282,1.84453049955565,0.72038491523742,0,0.370784442784429,0,0,0,0.476981248610684,1.14398982156026,0,0.596287222100115,0.860234595106124,0,1.13061588384802,0.838998872419812,1.10047216776027,0.417989933073621,3.35941786920128,2.84613010149368,3.68192674041137,1.61131726843659,0,0.976248230192678,1.10298924103761,2.43042584364528,1.7859945656816,0.898117490504679,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.886413581652058,3.04541115870403,1.43418310374407,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.67355336034844,0.490385709340376,0.302714855289863,0,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,1.02077085627447,0.368502951935304,0.826606249406124,0,0,0.910161361938026,0,0.505008341862199,0.625592599359821,0,0.438977620880838,0,0.150238058906597,0.340296549480063,0.179389635688862,0.427114777637135,0.635795703478686,0.600182192168805,0.618315175430633,0.257640540045629,0,0.337552664482532,0.584622030967192,0.252433774244115,0.368199594569197,0.323292113637624,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,1.21973706129595,1.32529768321485,1.39432731443422,0.725627385107593,2.01856680700503,2.18986415445498,0,0,0,0,0.721879481669586,1.30137480043828,0.337169380156203,0.964044119533928,0.882351781859152,1.30727666455444,1.18635309555548,0.674156540800822,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,1.10689594688802,0.514703430895577,0.219500570817251,0,0,0.370353780634118,0.651616610620649,0,0,1.27523445472584,1.76113041353732,0.721832238805369,0,0.761016608938393,0.790204397959275,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.80672114403045,2.32689088364,0,0,1.06375246633948,0,0,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,2.41151501647669,0,0.499864955910285,0,0,0,1.19812427745791,3.44585807502342,1.42636905040718,1.44781306667579,2.26023954805422,2.50685348535854,0.112085143993527,0.985153801009636,0.431255149719035,0.385029108839245,0.508189248444927,6.50699269288109,2.31986643833309,5.19300422536481,3.82763250991898,0,0,0,1.8403723757871,0.500170521059677,0.813795071099207,0.623912584592421,0.178428988797162,0.157702415033935,0.702848489956279,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0.686286847621712,0.413536052245775,0.431428401637234,0.320182673410333,0.303127571446259,1.66435439510497,1.20956117331872,1.73675465473144,0.767309866440312,1.12264037773229,3.20347873139252,1.02341449813341,0.64341568457443,0,0,0,0.0821271560138091,0,0,0.362578348774867,0.601519410909855,0.0920809889358963,0.574072240823034,0.364182336013434,1.31124414959424,0,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0.447749509444357,0,0.261435451024901,0.512900250232778,1.64007322849853,0,0.618246069886334,0.183138929636687,0.165018999841176,0,0,0,0.676695028044854,0.616194468458578,0.921022048356777,0.964856007391714,0.966782203814463,0.435050081742686,0.511359764496605,4.45160178233687,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0,0,0,0.286249773483982,0.744316738719335,2.53103539774981,0.190630193923825,0,1.28381696410176,0,0.78494864019923,1.07923474549989,1.09814811894422,0.824686816419805,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,0.633322905892992,0,0.379473173765715,0.349934720244983,0.096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| |||
|short_description=p12@SLC38A1 | |||
}} |
Revision as of 13:06, 11 January 2014
Short description: | p12@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 297bp_to_ENST00000552197, uc009zkj.1_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | F8VX04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.81e-07 | 6 |
neuroblast | 8.81e-07 | 6 |
electrically signaling cell | 8.81e-07 | 6 |