FFCP PHASE1:Hg19::chr12:14721192..14721202,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26215 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P4A8 | |||
|association_with_transcript=80bp_to_ENST00000240617_5end | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_8_at_PLBD1_5end | |||
|id=chr12:14721192..14721202,- | |||
|ontology_enrichment_celltype=CL:0002009!6.77e-48!65;CL:0002057!9.50e-45!42;CL:0000557!2.82e-43!71;CL:0000766!1.43e-42!76;CL:0002194!1.88e-42!63;CL:0000576!1.88e-42!63;CL:0000040!1.88e-42!63;CL:0000559!1.88e-42!63;CL:0000860!2.26e-41!45;CL:0000839!1.44e-37!70;CL:0000763!6.47e-31!112;CL:0000049!6.47e-31!112;CL:0000738!2.64e-30!140;CL:0002087!2.03e-24!119;CL:0000037!4.36e-23!172;CL:0000566!4.36e-23!172;CL:0002031!9.30e-22!124;CL:0000988!2.38e-21!182;CL:0002032!7.20e-20!165;CL:0000837!7.20e-20!165;CL:0000840!1.96e-11!5;CL:0001029!1.96e-11!5;CL:0001014!1.20e-09!2;CL:0001016!1.20e-09!2;CL:0000451!2.51e-09!10;CL:0000134!9.33e-09!358;CL:0002320!2.03e-08!365;CL:0000990!1.28e-07!8;CL:0000219!3.10e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.35e-57;2!CL:0001016;6.35e-57;2!CL:0000453;1.61e-23;5!CL:0000235;6.17e-20;6!CL:0000840;8.62e-20;5!CL:0000990;1.49e-13;8!CL:0000473;1.31e-12;39!CL:0000234;1.31e-12;39!CL:0000451;2.83e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.36e-57,2;CL:0001016,6.36e-57,2;CL:0000453,1.61e-23,5;CL:0002009,1.60e-22,61;CL:0000557,1.45e-20,67;CL:0000235,5.35e-20,6;CL:0000840,8.63e-20,5;CL:0001029,8.63e-20,5;CL:0000473,4.32e-15,48;CL:0000234,4.32e-15,48;CL:0000990,1.49e-13,8;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002194,3.80e-12,59;CL:0000576,3.80e-12,59;CL:0000040,3.80e-12,59;CL:0000559,3.80e-12,59;CL:0002031,1.14e-11,120;CL:0000451,2.83e-11,10;CL:0000839,6.51e-11,66;CL:0000738,2.51e-10,136;CL:0000766,4.84e-10,72;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000860,9.81e-07,42;CL:0002057,9.81e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-37!80;UBERON:0001474!1.62e-34!86;UBERON:0002390!1.87e-34!102;UBERON:0003061!1.87e-34!102;UBERON:0002193!1.08e-30!112;UBERON:0004765!2.43e-28!101;UBERON:0001434!2.43e-28!101;UBERON:0002405!8.17e-26!115;UBERON:0002204!1.67e-15!167;UBERON:0003081!2.56e-15!216;UBERON:0002384!1.23e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0.485168122375632,0.464858073811369,0,0,0,0.256160706529101,0.47296445977717,0,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,0,1.31940520074686,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.797747763113191,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44608103764552,1.48631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@PLBD1 | |||
}} |
Revision as of 12:24, 11 January 2014
Short description: | p8@PLBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PLBD1_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 80bp_to_ENST00000240617_5end |
EntrezGene: | PLBD1 |
HGNC: | 26215 |
UniProt: | Q6P4A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.36e-57 | 2 |
immature CD1a-positive Langerhans cell | 6.36e-57 | 2 |
Langerhans cell | 1.61e-23 | 5 |
macrophage dendritic cell progenitor | 1.60e-22 | 61 |
granulocyte monocyte progenitor cell | 1.45e-20 | 67 |
macrophage | 5.35e-20 | 6 |
immature conventional dendritic cell | 8.63e-20 | 5 |
common dendritic progenitor | 8.63e-20 | 5 |
defensive cell | 4.32e-15 | 48 |
phagocyte | 4.32e-15 | 48 |
conventional dendritic cell | 1.49e-13 | 8 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
monopoietic cell | 3.80e-12 | 59 |
monocyte | 3.80e-12 | 59 |
monoblast | 3.80e-12 | 59 |
promonocyte | 3.80e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
dendritic cell | 2.83e-11 | 10 |
myeloid lineage restricted progenitor cell | 6.51e-11 | 66 |
leukocyte | 2.51e-10 | 136 |
myeloid leukocyte | 4.84e-10 | 72 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
classical monocyte | 9.81e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.81e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-18 | 76 |
bone element | 6.63e-17 | 82 |
skeletal element | 1.92e-15 | 90 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
skeletal system | 6.14e-14 | 100 |
hemolymphoid system | 6.23e-13 | 108 |
musculoskeletal system | 1.92e-08 | 167 |
lateral plate mesoderm | 5.76e-07 | 203 |