FFCP PHASE1:Hg19::chr12:12509990..12510042,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118426 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17950 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1P3,Q969J3 | |||
|association_with_transcript=0bp_to_ENST00000542728,NM_058169,uc001ral.2,uc009zhu.2_5end | |||
|description=CAGE_peak_1_at_LOH12CR1_5end | |||
|id=chr12:12509990..12510042,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.99e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.66e-34!115;UBERON:0002346!4.30e-33!90;UBERON:0003075!9.65e-32!86;UBERON:0007284!9.65e-32!86;UBERON:0001049!1.45e-31!57;UBERON:0005068!1.45e-31!57;UBERON:0006241!1.45e-31!57;UBERON:0007135!1.45e-31!57;UBERON:0005743!1.74e-30!86;UBERON:0002616!4.56e-29!59;UBERON:0000073!5.74e-29!94;UBERON:0001016!5.74e-29!94;UBERON:0001017!6.61e-29!82;UBERON:0000955!9.41e-28!69;UBERON:0006238!9.41e-28!69;UBERON:0003080!8.52e-24!42;UBERON:0003056!1.16e-23!61;UBERON:0002780!1.40e-23!41;UBERON:0001890!1.40e-23!41;UBERON:0006240!1.40e-23!41;UBERON:0000153!6.97e-22!129;UBERON:0007811!6.97e-22!129;UBERON:0000033!8.44e-22!123;UBERON:0000924!2.97e-21!173;UBERON:0006601!2.97e-21!173;UBERON:0004121!4.73e-20!169;UBERON:0001893!3.09e-19!34;UBERON:0002020!3.66e-19!34;UBERON:0003528!3.66e-19!34;UBERON:0002791!1.16e-18!33;UBERON:0001869!5.83e-18!32;UBERON:0002619!8.93e-15!22;UBERON:0000956!8.14e-14!25;UBERON:0000203!8.14e-14!25;UBERON:0000475!1.43e-13!365;UBERON:0001950!1.79e-13!20;UBERON:0000481!1.37e-10!347;UBERON:0000468!5.98e-10!659;UBERON:0000483!1.31e-09!309;UBERON:0000119!1.52e-09!312;UBERON:0003076!7.60e-09!15;UBERON:0003057!7.60e-09!15;UBERON:0000025!1.26e-08!194;UBERON:0000922!6.03e-08!612;UBERON:0004732!9.82e-08!13;UBERON:0000477!1.46e-07!286;UBERON:0000064!1.52e-07!219;UBERON:0002050!1.58e-07!605;UBERON:0005423!1.58e-07!605;UBERON:0000923!2.48e-07!604;UBERON:0005291!2.48e-07!604;UBERON:0006598!2.48e-07!604;UBERON:0002532!2.48e-07!604;UBERON:0004733!4.51e-07!12;UBERON:0002028!4.51e-07!12;UBERON:0007277!4.51e-07!12;UBERON:0000062!6.20e-07!511;UBERON:0002308!7.35e-07!9;UBERON:0000125!7.35e-07!9;UBERON:0000480!8.24e-07!626;UBERON:0002420!9.29e-07!9;UBERON:0007245!9.29e-07!9;UBERON:0010009!9.29e-07!9;UBERON:0010011!9.29e-07!9;UBERON:0000454!9.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.94e-17;41!UBERON:0001890;2.94e-17;41!UBERON:0000073;1.30e-16;53!UBERON:0002616;1.30e-16;53!UBERON:0001893;1.58e-16;34!UBERON:0003528;1.59e-16;34!UBERON:0002020;1.59e-16;34!UBERON:0002791;2.06e-16;32!UBERON:0001869;2.14e-16;32!UBERON:0002619;8.04e-15;22!UBERON:0000956;7.75e-14;25!UBERON:0000203;7.75e-14;25!UBERON:0001950;1.63e-13;20!UBERON:0001017;2.58e-13;75!UBERON:0000955;3.56e-12;68!UBERON:0001016;9.79e-11;83!UBERON:0007023;2.70e-10;114!UBERON:0004732;1.01e-07;13!UBERON:0004733;4.71e-07;12!UBERON:0002028;4.71e-07;12!UBERON:0000125;6.83e-07;9!UBERON:0002308;6.83e-07;9!UBERON:0002420;8.45e-07;9!UBERON:0007245;8.45e-07;9!UBERON:0010009;8.45e-07;9!UBERON:0010011;8.45e-07;9!UBERON:0000454;8.45e-07;9 | |||
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| |||
|short_description=p1@LOH12CR1 | |||
}} |
Revision as of 12:16, 11 January 2014
Short description: | p1@LOH12CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOH12CR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542728, NM_058169, uc001ral.2, uc009zhu.2_5end |
EntrezGene: | LOH12CR1 |
HGNC: | 17950 |
UniProt: | G3V1P3Q969J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data