FFCP PHASE1:Hg19::chr11:71791849..71791904,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25033 | |||
|TSSclassifier=strong | |||
|UniProt=Q96E66,Q8WZ04,C9JDG7,F5H6F7 | |||
|association_with_transcript=0bp_to_ENST00000324866,ENST00000423494,ENST00000427369,ENST00000439209,ENST00000538478,ENST00000539587,ENST00000544409_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_LRTOMT_5end | |||
|id=chr11:71791849..71791904,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.65e-07;82 | |||
|ontology_enrichment_disease=DOID:305!5.49e-09!106;DOID:0050687!4.34e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.53e-09,106;DOID:0050687,5.18e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.07e-19!86;UBERON:0003075!1.32e-19!86;UBERON:0007284!1.32e-19!86;UBERON:0000073!4.05e-19!94;UBERON:0001016!4.05e-19!94;UBERON:0000475!5.40e-19!365;UBERON:0001049!7.77e-19!57;UBERON:0005068!7.77e-19!57;UBERON:0006241!7.77e-19!57;UBERON:0007135!7.77e-19!57;UBERON:0001017!1.30e-18!82;UBERON:0000955!2.64e-18!69;UBERON:0006238!2.64e-18!69;UBERON:0000153!3.37e-18!129;UBERON:0007811!3.37e-18!129;UBERON:0002346!6.39e-18!90;UBERON:0004121!8.08e-18!169;UBERON:0000033!1.38e-17!123;UBERON:0000924!8.12e-17!173;UBERON:0006601!8.12e-17!173;UBERON:0003056!2.23e-16!61;UBERON:0002780!3.49e-16!41;UBERON:0001890!3.49e-16!41;UBERON:0006240!3.49e-16!41;UBERON:0003080!1.82e-15!42;UBERON:0000064!2.47e-15!219;UBERON:0002616!3.33e-15!59;UBERON:0000481!7.45e-13!347;UBERON:0007023!1.78e-12!115;UBERON:0002020!2.97e-12!34;UBERON:0003528!2.97e-12!34;UBERON:0001893!3.19e-12!34;UBERON:0002791!6.60e-12!33;UBERON:0001869!1.73e-11!32;UBERON:0000062!1.91e-09!511;UBERON:0000483!1.97e-08!309;UBERON:0000956!2.57e-08!25;UBERON:0000203!2.57e-08!25;UBERON:0000119!4.44e-08!312;UBERON:0000468!7.70e-08!659;UBERON:0002619!1.76e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.81e-12;41!UBERON:0001890;2.81e-12;41!UBERON:0000073;1.87e-11;53!UBERON:0002616;1.87e-11;53!UBERON:0001893;5.52e-11;34!UBERON:0003528;6.69e-11;34!UBERON:0002020;6.69e-11;34!UBERON:0001869;1.29e-10;32!UBERON:0002791;1.88e-10;32!UBERON:0000955;6.86e-09;68!UBERON:0001017;1.03e-08;75!UBERON:0000956;1.95e-08;25!UBERON:0000203;1.95e-08;25!UBERON:0002619;1.62e-07;22!UBERON:0001016;3.40e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,6.23e-20,82;UBERON:0007284,6.23e-20,82;UBERON:0001049,1.24e-19,56;UBERON:0005068,1.24e-19,56;UBERON:0006241,1.24e-19,56;UBERON:0007135,1.24e-19,56;UBERON:0001017,2.35e-19,81;UBERON:0000955,4.12e-19,68;UBERON:0006238,4.12e-19,68;UBERON:0000073,7.46e-19,53;UBERON:0002616,7.46e-19,53;UBERON:0001016,1.07e-18,89;UBERON:0002346,3.68e-18,86;UBERON:0003056,2.63e-17,61;UBERON:0010371,4.77e-17,104;UBERON:0004121,7.52e-17,171;UBERON:0000924,7.52e-17,171;UBERON:0006601,7.52e-17,171;UBERON:0002780,2.75e-16,41;UBERON:0001890,2.75e-16,41;UBERON:0003080,2.75e-16,41;UBERON:0006240,2.75e-16,41;UBERON:0011216,1.02e-15,223;UBERON:0010314,4.59e-14,132;UBERON:0003528,2.49e-12,34;UBERON:0002020,2.49e-12,34;UBERON:0001893,2.68e-12,34;UBERON:0007023,3.67e-12,114;UBERON:0001869,1.47e-11,32;UBERON:0002791,2.26e-11,32;UBERON:0000956,2.30e-08,25;UBERON:0000203,2.30e-08,25;UBERON:0000483,3.56e-08,306;UBERON:0000119,7.96e-08,309;UBERON:0002619,1.60e-07,22 | |||
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| |||
|short_description=p1@LRTOMT | |||
}} |
Revision as of 09:13, 11 January 2014
Short description: | p1@LRTOMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRTOMT_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000324866, ENST00000423494, ENST00000427369, ENST00000439209, ENST00000538478, ENST00000539587, ENST00000544409_5end |
EntrezGene: | LRTOMT |
HGNC: | 25033 |
UniProt: | Q96E66Q8WZ04C9JDG7F5H6F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.53e-09 | 106 |
cell type cancer | 5.18e-07 | 143 |