FFCP PHASE1:Hg19::chr11:67888730..67888774,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1937 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000356135_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_CHKA_5end | |||
|id=chr11:67888730..67888774,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.94e-15;5!CL:0000235;1.39e-12;6!CL:0000163;1.05e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.37e-15,5;CL:0002028,2.37e-15,5;CL:0000235,1.26e-12,6;CL:0000163,9.31e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.12e-09;1!UBERON:0009117;5.65e-08;10!UBERON:0005564;5.65e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!8.39e-08!22;UBERON:0000079!8.39e-08!22;UBERON:0007023!3.08e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.49e-10;8!UBERON:0000941;3.12e-09;1!UBERON:0001785;3.12e-09;1!UBERON:0002464;3.12e-09;1!UBERON:0004904;3.12e-09;1!UBERON:0001021;3.12e-09;1!UBERON:0003135;2.74e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.33e-10,8;UBERON:0000941,2.55e-09,1;UBERON:0001785,2.55e-09,1;UBERON:0002464,2.55e-09,1;UBERON:0004904,2.55e-09,1;UBERON:0001021,2.55e-09,1;UBERON:0003902,2.55e-09,1;UBERON:0005425,2.55e-09,1;UBERON:0003135,2.95e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0.0821005894499457,0,0,0.383829398097213,0.309632246632152,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0.434021741431704,0.223915474239924,0,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,10.4128365020682,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,1.4512968087854,2.73827911492227,3.91351543621778,0,0.381988425558278,3.51652341630141,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0.76228387266739,0,0,0,0,0,2.99161459204025,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,1.81289174387433,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.113942055847001,0.23056390438806,0.269272933229316,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0.326465616318295,0,0,0,1.32686346755009,0.611030144933625,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,2.1045278718029,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.176512253383001,0,0,0,0.126621591911757,1.17330829640882,0.0801588202515337,0,0.19980960958213,0,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.137539436597234,0,0.899895566206002,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0.129282956361551,0,0,0,0.747511887973863,0.157204305099666,0.828478110694391,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0.151649117541648,1.99825733481477,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.247871528518004,0,0,0.157723490002507,0,0.352675943690684,0,0,0,0.159633859057151,0.82046545696302,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.126831620387814,1.09394961803644,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0.118193840883968,0,0.313972371402056,0,0.280272163313789,0,0.215927591218621,0,0.214429632529969,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.846774100381858,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0.594600453887843,0,0,0,1.00326405540328,0,0.470317296361523,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0.730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| |||
|short_description=p4@CHKA | |||
}} |
Revision as of 09:03, 11 January 2014
Short description: | p4@CHKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHKA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000356135_5end |
EntrezGene: | CHKA |
HGNC: | 1937 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.37e-15 | 5 |
basophil mast progenitor cell | 2.37e-15 | 5 |
macrophage | 1.26e-12 | 6 |
endocrine cell | 9.31e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
testis | 8.33e-10 | 8 |
cranial nerve II | 2.55e-09 | 1 |
cranial nerve | 2.55e-09 | 1 |
nerve trunk | 2.55e-09 | 1 |
nerve connecting eye with brain | 2.55e-09 | 1 |
nerve | 2.55e-09 | 1 |
retinal neural layer | 2.55e-09 | 1 |
presumptive neural retina | 2.55e-09 | 1 |
male reproductive organ | 2.95e-07 | 11 |