FFCP PHASE1:Hg19::chr11:59522900..59522936,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11438 | |||
|TSSclassifier=strong | |||
|UniProt=B4DME0 | |||
|association_with_transcript=0bp_to_ENST00000529177,ENST00000530498_5end | |||
|description=CAGE_peak_2_at_STX3_5end | |||
|id=chr11:59522900..59522936,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.29e-17!76;CL:0000557!5.37e-14!71;CL:0000839!3.14e-12!70;CL:0002009!3.06e-11!65;CL:0002057!5.38e-11!42;CL:0002194!1.30e-10!63;CL:0000576!1.30e-10!63;CL:0000040!1.30e-10!63;CL:0000559!1.30e-10!63;CL:0000860!3.53e-10!45;CL:0000763!4.98e-09!112;CL:0000049!4.98e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.68e-14;39!CL:0000234;1.68e-14;39!CL:0000860;2.00e-14;33!CL:0002057;2.00e-14;33!CL:0000766;7.60e-09;69!CL:0000576;1.18e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.17e-21,72;CL:0000557,1.43e-17,67;CL:0000839,2.57e-15,66;CL:0000473,5.79e-15,48;CL:0000234,5.79e-15,48;CL:0002009,2.53e-14,61;CL:0002194,1.38e-13,59;CL:0000576,1.38e-13,59;CL:0000040,1.38e-13,59;CL:0000559,1.38e-13,59;CL:0000860,2.83e-12,42;CL:0002057,2.83e-12,42;CL:0000763,1.58e-10,108;CL:0000049,1.58e-10,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.71e-11!112;UBERON:0002371!4.49e-11!80;UBERON:0002390!8.18e-11!102;UBERON:0003061!8.18e-11!102;UBERON:0007023!3.66e-10!115;UBERON:0000062!4.89e-10!511;UBERON:0001474!1.94e-09!86;UBERON:0000467!2.16e-08!625;UBERON:0000480!2.73e-08!626;UBERON:0000468!5.66e-08!659;UBERON:0002405!1.05e-07!115;UBERON:0004765!6.12e-07!101;UBERON:0001434!6.12e-07!101;UBERON:0000922!8.68e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.19e-14,108;UBERON:0002371,5.69e-14,76;UBERON:0002390,1.45e-13,98;UBERON:0003061,1.45e-13,98;UBERON:0002405,8.71e-13,93;UBERON:0001474,1.71e-11,82;UBERON:0004765,8.74e-10,90;UBERON:0007023,6.68e-09,114;UBERON:0000922,3.79e-08,592;UBERON:0001434,1.25e-07,100;UBERON:0005423,2.11e-07,581;UBERON:0003081,4.29e-07,203 | |||
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| |||
|short_description=p2@STX3 | |||
}} |
Revision as of 07:52, 11 January 2014
Short description: | p2@STX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529177, ENST00000530498_5end |
EntrezGene: | STX3 |
HGNC: | 11438 |
UniProt: | B4DME0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.17e-21 | 72 |
granulocyte monocyte progenitor cell | 1.43e-17 | 67 |
myeloid lineage restricted progenitor cell | 2.57e-15 | 66 |
defensive cell | 5.79e-15 | 48 |
phagocyte | 5.79e-15 | 48 |
macrophage dendritic cell progenitor | 2.53e-14 | 61 |
monopoietic cell | 1.38e-13 | 59 |
monocyte | 1.38e-13 | 59 |
monoblast | 1.38e-13 | 59 |
promonocyte | 1.38e-13 | 59 |
classical monocyte | 2.83e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-12 | 42 |
myeloid cell | 1.58e-10 | 108 |
common myeloid progenitor | 1.58e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.19e-14 | 108 |
bone marrow | 5.69e-14 | 76 |
hematopoietic system | 1.45e-13 | 98 |
blood island | 1.45e-13 | 98 |
immune system | 8.71e-13 | 93 |
bone element | 1.71e-11 | 82 |
skeletal element | 8.74e-10 | 90 |
adult organism | 6.68e-09 | 114 |
embryo | 3.79e-08 | 592 |
skeletal system | 1.25e-07 | 100 |
developing anatomical structure | 2.11e-07 | 581 |
lateral plate mesoderm | 4.29e-07 | 203 |