FFCP PHASE1:Hg19::chr11:20385252..20385320,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16637 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUP3 | |||
|association_with_transcript=0bp_to_ENST00000419348,ENST00000421577,ENST00000443524,NM_001098520,uc001mpx.2_5end | |||
|description=CAGE_peak_1_at_HTATIP2_5end | |||
|id=chr11:20385252..20385320,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.82e-26!76;CL:0002194!4.73e-26!63;CL:0000576!4.73e-26!63;CL:0000040!4.73e-26!63;CL:0000559!4.73e-26!63;CL:0002009!5.52e-24!65;CL:0000839!6.81e-23!70;CL:0000557!1.01e-21!71;CL:0000860!4.80e-19!45;CL:0002057!1.00e-17!42;CL:0000738!9.70e-15!140;CL:0000063!1.05e-14!578;CL:0002087!1.45e-14!119;CL:0002031!1.63e-12!124;CL:0000763!1.64e-12!112;CL:0000049!1.64e-12!112;CL:0002032!7.04e-09!165;CL:0000837!7.04e-09!165;CL:0000066!3.03e-08!254;CL:0000003!4.92e-08!722;CL:0000037!9.05e-08!172;CL:0000566!9.05e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.72e-15;39!CL:0000234;1.72e-15;39!CL:0000860;7.17e-15;33!CL:0002057;7.17e-15;33!CL:0000576;2.00e-13;48!CL:0000766;3.11e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.89e-25,72;CL:0002194,7.35e-25,59;CL:0000576,7.35e-25,59;CL:0000040,7.35e-25,59;CL:0000559,7.35e-25,59;CL:0002009,8.88e-23,61;CL:0000839,1.13e-21,66;CL:0000473,1.94e-21,48;CL:0000234,1.94e-21,48;CL:0000557,1.67e-20,67;CL:0000860,1.00e-17,42;CL:0002057,1.00e-17,42;CL:0000738,1.00e-13,136;CL:0002087,1.59e-13,115;CL:0002031,1.54e-11,120;CL:0000763,1.69e-11,108;CL:0000049,1.69e-11,108;CL:0000066,3.29e-08,253;CL:0002032,4.31e-08,161;CL:0000837,4.31e-08,161;CL:0000037,4.82e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.96e-13;42 | |||
|ontology_enrichment_disease=DOID:305!3.13e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.02e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.78e-20!80;UBERON:0002193!2.28e-19!112;UBERON:0002390!1.01e-18!102;UBERON:0003061!1.01e-18!102;UBERON:0001474!1.57e-15!86;UBERON:0002405!2.31e-15!115;UBERON:0004765!6.96e-13!101;UBERON:0001434!6.96e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-18,76;UBERON:0002193,3.42e-18,108;UBERON:0002405,1.24e-17,93;UBERON:0002390,1.51e-17,98;UBERON:0003061,1.51e-17,98;UBERON:0001474,2.27e-14,82;UBERON:0004765,7.57e-14,90;UBERON:0001434,5.51e-11,100 | |||
|phase1_expression=46.3279867139919,35.1124859181212,43.1320476533672,43.0315182918461,31.2872766099101,33.148863915814,10.1319951267324,18.9515962028049,17.760622717589,19.4129809836192,10.4670175195864,26.2129646556207,30.5969694745006,15.965859531846,16.5698687863958,18.8251041006497,14.4646686725754,30.6730237962697,17.5655807564582,5.90981078768582,5.91602004608334,2.19418305034661,14.884271330815,9.71808418017478,5.64941878176613,16.8109492645493,11.0835795757427,13.0659896980708,29.5023207636678,16.1208347200829,23.6868668673596,18.3884244895785,16.5663255328038,20.7062245693401,11.7750144882058,17.7711540609277,20.8456311927742,20.4978301156795,18.8511780621933,19.7479892351425,94.716245603488,90.6902264853143,86.0302395898183,54.6697377811163,47.9902448484788,42.20962664668,56.9451140418927,61.6751832032739,57.9150913573844,60.4154023876516,59.4292839147513,57.2286996330376,58.6067657252252,42.6019891165325,46.0450054420762,73.4145124216158,82.9634696175851,73.2598559290976,66.7262885368568,60.9765151444578,51.7863071897223,68.2792191386502,51.6610873240027,42.6224750532694,83.2900514864036,104.966266567861,90.3092261043584,75.8770969075365,50.0623601683393,56.2519107786252,81.7289328555048,80.6528022812767,78.4826720853393,56.8276720179123,50.1746147917503,63.1072522980211,37.0684482783434,51.5106742446367,38.8955919806934,60.1376889294034,61.863086608917,63.7497896638572,51.0389108937836,33.8605938982522,32.9118423929515,37.9789898084191,34.0336588980611,37.9336610369959,43.6289616038009,39.1162039359499,16.507176104174,9.98303221930596,15.6732023531344,11.8954195721123,4.48406850385229,18.1735018494803,13.7696839079683,10.2182798314783,17.6817289139578,50.8246945987661,29.9848485302903,36.4554810415745,31.1722765452658,53.0313774773426,39.1825856941533,52.9466008054855,46.5782645675827,40.220674393862,51.8936796763914,25.3234373089661,30.1221519386575,31.5885363451207,23.5775635427676,22.2058887314462,25.0885257131944,31.4999972699234,29.8911985009499,35.3936268847109,30.8684024263793,37.9092843045675,37.7628403236723,35.1667256445898,32.3736506017211,39.163903013252,37.4792179657038,33.3855925382064,39.4141438522102,14.1124720257313,11.4999284186908,11.4411279067411,24.3806866313962,40.2420515822182,19.3072468383731,13.0118094858444,17.0454889616202,21.4372848062019,15.905718941022,18.9787599418028,15.314640380579,14.1906814376041,6.85111328406383,18.9264764094195,20.4005361443824,21.1347132387125,95.0923863408222,92.2887607686116,78.3122387456116,5.96226560763355,9.15191857248205,8.91498003190956,18.0873790703702,17.2046919021225,22.9112731061012,12.4367747223282,19.2969740656557,12.6554299292431,17.5555771890921,43.4140155404473,54.07647192838,39.4970323062311,34.6433212713866,20.5273468543998,32.2161915963584,19.1184801779852,21.0636906449257,37.3272864227453,35.4756408749348,34.23389006693,19.9311628705648,10.4419222552494,11.9081133554765,46.1231461026221,65.9226449052153,13.9550096685611,18.8849341644221,14.0559867947684,8.34177839123278,14.9155042789383,15.2507404345294,13.4562624034154,12.8098794875646,17.020060840784,18.9838731593857,25.8644490373801,17.4904236331401,14.8330279092033,13.82822218752,10.0758215688533,16.8566441488373,11.9799082524334,21.5206099994594,17.497740297921,11.8167249388736,11.9383185696911,33.8895924283123,12.5291003658003,36.1640234115179,27.3240657174872,36.3482386039479,16.3829045148845,11.4978902690598,14.9819141419119,6.25592599359821,28.5376038948708,10.5354629011401,12.8724874235588,31.7002304292919,15.4267769097629,5.38168907066586,16.2303615502111,21.4051220171157,18.0054657650641,26.3814474850404,21.3841648237872,38.8984229733023,13.5021065793013,25.8208063677176,16.9130628743557,36.4517598623505,25.8633690910099,12.0703261455649,21.4601969224874,22.3819981849844,60.2973861869486,42.5483948121702,47.6095628345746,23.1750041646231,22.7951201512955,21.2634915451219,18.8663120127974,17.662459561294,9.85438869504741,25.0319251727706,25.0863965895225,29.0083334840209,32.5057549622385,30.3189382301226,73.2319092246634,73.5029248740523,60.7347795306375,74.0072557034363,73.4253726591409,65.4866908746627,73.7527255636099,70.4435059799992,68.1002467795111,9.59602091012043,2.80483547606892,9.8777762719536,13.2307840246988,49.434463580514,40.2959158837827,71.4855787084499,0,92.7332826615076,20.7597050461216,24.2548130753062,25.8524032492525,13.5714112755702,22.1286383928886,18.5710734026885,17.6788913497528,24.5363281442965,7.53547632337999,19.9594780200897,41.7219034029503,34.7239134432458,43.3779467094884,35.5591979081674,27.4715571870359,97.9943684227841,93.1336975254166,73.275163008343,59.0523154116695,77.4397610996742,47.4946575761995,17.4639119270554,12.2066254175864,1.91691339582606,32.0231104632363,42.9676357984543,13.683655625691,15.4208350156149,15.275334444592,31.1139682031628,58.4442291104165,32.8208852188132,37.6359381249951,21.4909459749946,40.2459697510849,35.7283040788223,7.40065156679381,9.59112151433216,5.06034172164555,16.28823618548,35.7656445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| |||
|short_description=p1@HTATIP2 | |||
}} |
Revision as of 06:56, 11 January 2014
Short description: | p1@HTATIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTATIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419348, ENST00000421577, ENST00000443524, NM_001098520, uc001mpx.2_5end |
EntrezGene: | HTATIP2 |
HGNC: | 16637 |
UniProt: | Q9BUP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.89e-25 | 72 |
monopoietic cell | 7.35e-25 | 59 |
monocyte | 7.35e-25 | 59 |
monoblast | 7.35e-25 | 59 |
promonocyte | 7.35e-25 | 59 |
macrophage dendritic cell progenitor | 8.88e-23 | 61 |
myeloid lineage restricted progenitor cell | 1.13e-21 | 66 |
defensive cell | 1.94e-21 | 48 |
phagocyte | 1.94e-21 | 48 |
granulocyte monocyte progenitor cell | 1.67e-20 | 67 |
classical monocyte | 1.00e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-17 | 42 |
leukocyte | 1.00e-13 | 136 |
nongranular leukocyte | 1.59e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.54e-11 | 120 |
myeloid cell | 1.69e-11 | 108 |
common myeloid progenitor | 1.69e-11 | 108 |
epithelial cell | 3.29e-08 | 253 |
hematopoietic oligopotent progenitor cell | 4.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.31e-08 | 161 |
hematopoietic stem cell | 4.82e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-18 | 76 |
hemolymphoid system | 3.42e-18 | 108 |
immune system | 1.24e-17 | 93 |
hematopoietic system | 1.51e-17 | 98 |
blood island | 1.51e-17 | 98 |
bone element | 2.27e-14 | 82 |
skeletal element | 7.57e-14 | 90 |
skeletal system | 5.51e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.02e-07 | 106 |