FFCP PHASE1:Hg19::chr11:14541680..14541712,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5682 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9530 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-62bp_to_ENST00000526443_5end | |||
|description=CAGE_peak_4_at_PSMA1_5end | |||
|id=chr11:14541680..14541712,- | |||
|ontology_enrichment_celltype=CL:0000548!5.07e-10!679;CL:0000004!5.07e-10!679;CL:0000255!5.07e-10!679;CL:0000012!2.42e-09!682;CL:0000860!1.26e-08!45;CL:0002057!2.75e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.05e-16;33!CL:0002057;8.05e-16;33!CL:0000473;4.72e-10;39!CL:0000234;4.72e-10;39!CL:0000576;1.12e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.07e-14,42;CL:0002057,1.07e-14,42;CL:0000473,5.14e-12,48;CL:0000234,5.14e-12,48;CL:0002194,2.75e-09,59;CL:0000576,2.75e-09,59;CL:0000040,2.75e-09,59;CL:0000559,2.75e-09,59;CL:0002009,8.82e-09,61;CL:0000839,1.75e-08,66;CL:0000557,1.86e-07,67;CL:0000359,9.51e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.87e-07;42!UBERON:0003509;2.87e-07;42!UBERON:0004572;2.87e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.23e-11,203;UBERON:0001637,5.10e-10,42;UBERON:0003509,5.10e-10,42;UBERON:0004572,5.10e-10,42;UBERON:0000055,1.36e-09,68;UBERON:0007500,3.28e-09,59;UBERON:0001981,3.28e-09,59;UBERON:0004537,3.28e-09,59;UBERON:0006965,3.28e-09,59;UBERON:0002371,4.41e-08,76;UBERON:0004872,2.16e-07,83;UBERON:0004765,3.70e-07,90;UBERON:0001474,5.22e-07,82 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.845726424575827,1.0007329835313,0,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0,0,0,2.01697543935533,0,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0.627713197974014,0.152826811495903,0.246301768349837,0.236132343941038,0.393364276848904,0.767658796194425,0.928896739896456,0.919421224478927,0.30120591877825,1.10926203050036,0.154934401160603,0.568676929949686,0.293600439334847,1.10799081706375,1.40381113229099,0.651032612147555,0.223915474239924,0,0,0.726991193897824,0,0.727752183563449,0.929716147622738,1.6446715520873,2.78735733805593,2.3015391385772,1.0246428261164,2.83778675866302,5.86067657252252,1.29096936716765,1.35426486594342,0.564727018627814,1.63743690034707,0.898893937780338,5.50951006267625,3.20929027076094,5.75403413219137,0.659702600373432,0.398927315243264,0,5.22376629531451,3.97169657283798,3.73693349397345,0.75374599577023,2.08593167368081,1.52032191293582,6.05399502633369,4.41933163185078,5.06339819905415,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0.221533894583621,0.270803863765016,0,0.260118695119756,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0.383587685530591,0.361439152384566,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,0.472674085820339,0.886917589850256,0.175669571386252,0.261958150995425,0,0,0.97364218096405,0.348259474598534,0.132957960518865,0,0,0,0.79504962946682,0,0,0,2.93649605346934,1.37559020970034,1.04497483268405,0.775250277507987,0,0,1.20848795132744,3.04108842287405,0.976248230192678,0.367663080345869,0.81014194788176,0.625098097988558,0,0.563057402416611,0,2.84779697870439,1.28241220751285,0,0,0,0.496971951695318,1.01304409331664,1.85372853138506,0.860509862246441,0,0,0,1.2333377420858,0,1.21239604862719,0.817309515567294,0.302714855289863,0.576175924479999,0,0.624320153660641,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.61417158655884,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,1.24775401476023,0.538168907066586,0.213557388818567,0.423863802319124,0.600182192168805,0.618315175430633,0,0.18611685633159,0.506328996723799,0.194874010322397,0.252433774244115,0.552299391853796,0.323292113637624,0,0.302256294682921,1.01736355386293,0.773043412653187,1.36373060295417,0.573609190778008,1.70763188581434,0.927708378250397,0.116193942869518,1.34759371519982,1.51392510525377,0.36497735907583,0,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,0.828147600278907,0.842923450390509,0.482022059766964,0.55146986366197,1.30727666455444,0.949082476444386,1.07865046528132,2.15843611637881,0.769494313892781,0.738155454624648,0,0.4115740113314,1.47008711385542,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0.737930631258681,0.171567810298526,0.329250856225877,1.1240175325762,0.402115889646523,0.185176890317059,0,0,1.44331342025273,0.34779121492523,0.117408694235822,1.01056513432752,0,1.14152491340759,0,0,0,0.936017060556951,0.148631162288728,1.87467667973554,1.34385702559088,0.850650583454319,0.895585227028483,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,1.14596527667483,0,1.71072446022705,0.308482478109971,0,0.285826432630578,0.112131084345361,0.43596006883328,0.1466765716419,1.16344544182,0,0,0.531876233169741,0,0.257207374262142,0,0,0.285955987316295,0,0,0.977208552881205,0,0.791951872933429,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0.718874566474748,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0.448340575974109,0.197030760201927,0,0.256686072559497,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0,0.368738337083406,0.434418072340414,0,0,0,0.215714200818617,0.213455115606889,0.909382714338778,0,0,0.992431231275107,1.07423381301644,0.841980283299221,0.768834895534206,0.511707249066704,0.64341568457443,1.48418066444991,0.616838775210622,0.532685175939381,0.246381468041427,0,0.464841513839837,0.362578348774867,0.200506470303285,0.276242966807689,1.03333003348146,0.364182336013434,0,0,1.07821471946181,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,1.54227252690289,0,0,0,0.831076008928724,0.223874754722178,0.657779629937804,1.3071772551245,0,0,0.325378394664303,0.309123034943167,0.366277859273374,0.330037999682352,1.14853107599234,0.650060246036521,0,0.48335359146061,0.308097234229289,0,0.275673144969061,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0.495854746082934,1.53752053892085,0.382838137483752,0.50578890427775,0.46484554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| |||
|short_description=p4@PSMA1 | |||
}} |
Revision as of 06:43, 11 January 2014
Short description: | p4@PSMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PSMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_ENST00000526443_5end |
EntrezGene: | PSMA1 |
HGNC: | 9530 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.07e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-14 | 42 |
defensive cell | 5.14e-12 | 48 |
phagocyte | 5.14e-12 | 48 |
monopoietic cell | 2.75e-09 | 59 |
monocyte | 2.75e-09 | 59 |
monoblast | 2.75e-09 | 59 |
promonocyte | 2.75e-09 | 59 |
macrophage dendritic cell progenitor | 8.82e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.75e-08 | 66 |
granulocyte monocyte progenitor cell | 1.86e-07 | 67 |
vascular associated smooth muscle cell | 9.51e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.23e-11 | 203 |
artery | 5.10e-10 | 42 |
arterial blood vessel | 5.10e-10 | 42 |
arterial system | 5.10e-10 | 42 |
vessel | 1.36e-09 | 68 |
epithelial tube open at both ends | 3.28e-09 | 59 |
blood vessel | 3.28e-09 | 59 |
blood vasculature | 3.28e-09 | 59 |
vascular cord | 3.28e-09 | 59 |
bone marrow | 4.41e-08 | 76 |
splanchnic layer of lateral plate mesoderm | 2.16e-07 | 83 |
skeletal element | 3.70e-07 | 90 |
bone element | 5.22e-07 | 82 |