FFCP PHASE1:Hg19::chr10:126432849..126432931,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28968 | |||
|TSSclassifier=strong | |||
|UniProt=Q14153 | |||
|association_with_transcript=0bp_to_NM_014661,uc001lhv.1,uc001lhw.2_5end | |||
|coexpression_cluster_id=C2985 | |||
|description=CAGE_peak_1_at_FAM53B_5end | |||
|id=chr10:126432849..126432931,- | |||
|ontology_enrichment_celltype=CL:0000037!2.10e-23!172;CL:0000566!2.10e-23!172;CL:0000738!8.84e-22!140;CL:0000988!2.13e-21!182;CL:0002032!8.67e-21!165;CL:0000837!8.67e-21!165;CL:0002031!8.76e-16!124;CL:0000838!9.32e-16!52;CL:0000542!1.40e-15!53;CL:0000051!1.40e-15!53;CL:0002087!3.28e-15!119;CL:0000084!3.52e-08!25;CL:0000827!3.52e-08!25;CL:0000236!6.14e-08!14;CL:0000763!8.09e-08!112;CL:0000049!8.09e-08!112;CL:0000791!9.66e-08!18;CL:0000789!9.66e-08!18;CL:0002420!9.66e-08!18;CL:0002419!9.66e-08!18;CL:0000790!9.66e-08!18;CL:0000945!3.40e-07!24;CL:0000826!3.40e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.56e-10;53!CL:0000236;1.24e-08;13!CL:0000084;2.41e-08;25!CL:0000791;9.77e-08;18!CL:0000789;9.77e-08;18!CL:0002419;9.77e-08;18!CL:0000945;4.14e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.80e-24,168;CL:0000738,5.80e-23,136;CL:0000988,6.72e-23,177;CL:0002032,8.62e-22,161;CL:0000837,8.62e-22,161;CL:0002031,8.79e-17,120;CL:0002087,3.62e-16,115;CL:0000838,5.89e-16,52;CL:0000542,8.92e-16,53;CL:0000051,8.92e-16,53;CL:0000763,2.35e-08,108;CL:0000049,2.35e-08,108;CL:0000084,2.44e-08,25;CL:0000827,2.44e-08,25;CL:0000236,5.70e-08,14;CL:0000791,8.98e-08,18;CL:0000789,8.98e-08,18;CL:0002420,8.98e-08,18;CL:0002419,8.98e-08,18;CL:0000790,8.98e-08,18;CL:0000945,3.18e-07,24;CL:0000826,3.18e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;4.56e-10;53!CL:0000790;9.77e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.39e-23!115;UBERON:0001049!2.36e-08!57;UBERON:0005068!2.36e-08!57;UBERON:0006241!2.36e-08!57;UBERON:0007135!2.36e-08!57;UBERON:0002390!4.88e-07!102;UBERON:0003061!4.88e-07!102;UBERON:0001893!8.84e-07!34;UBERON:0002020!9.89e-07!34;UBERON:0003528!9.89e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.80e-23,114;UBERON:0001049,3.49e-08,56;UBERON:0005068,3.49e-08,56;UBERON:0006241,3.49e-08,56;UBERON:0007135,3.49e-08,56;UBERON:0002390,1.73e-07,98;UBERON:0003061,1.73e-07,98;UBERON:0000073,2.13e-07,53;UBERON:0002616,2.13e-07,53;UBERON:0002193,9.86e-07,108 | |||
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| |||
|short_description=p1@FAM53B | |||
}} |
Revision as of 05:28, 11 January 2014
Short description: | p1@FAM53B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM53B_5end |
Coexpression cluster: | C2985_Melanocyte_CD19_Natural_Dendritic_CD8_thalamus_blood |
Association with transcript: | 0bp_to_NM_014661, uc001lhv.1, uc001lhw.2_5end |
EntrezGene: | FAM53B |
HGNC: | 28968 |
UniProt: | Q14153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.80e-24 | 168 |
leukocyte | 5.80e-23 | 136 |
hematopoietic cell | 6.72e-23 | 177 |
hematopoietic oligopotent progenitor cell | 8.62e-22 | 161 |
hematopoietic multipotent progenitor cell | 8.62e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 8.79e-17 | 120 |
nongranular leukocyte | 3.62e-16 | 115 |
lymphoid lineage restricted progenitor cell | 5.89e-16 | 52 |
lymphocyte | 8.92e-16 | 53 |
common lymphoid progenitor | 8.92e-16 | 53 |
myeloid cell | 2.35e-08 | 108 |
common myeloid progenitor | 2.35e-08 | 108 |
T cell | 2.44e-08 | 25 |
pro-T cell | 2.44e-08 | 25 |
B cell | 5.70e-08 | 14 |
mature alpha-beta T cell | 8.98e-08 | 18 |
alpha-beta T cell | 8.98e-08 | 18 |
immature T cell | 8.98e-08 | 18 |
mature T cell | 8.98e-08 | 18 |
immature alpha-beta T cell | 8.98e-08 | 18 |
lymphocyte of B lineage | 3.18e-07 | 24 |
pro-B cell | 3.18e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.80e-23 | 114 |
neural tube | 3.49e-08 | 56 |
neural rod | 3.49e-08 | 56 |
future spinal cord | 3.49e-08 | 56 |
neural keel | 3.49e-08 | 56 |
hematopoietic system | 1.73e-07 | 98 |
blood island | 1.73e-07 | 98 |
regional part of nervous system | 2.13e-07 | 53 |
regional part of brain | 2.13e-07 | 53 |
hemolymphoid system | 9.86e-07 | 108 |