FFCP PHASE1:Hg19::chr10:112115232..112115242,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_at_chr10:112115232..112115242,+ | |||
|id=chr10:112115232..112115242,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.75e-82!24;CL:0000826!3.75e-82!24;CL:0000838!8.10e-61!52;CL:0000542!1.46e-59!53;CL:0000051!1.46e-59!53;CL:0000236!8.13e-44!14;CL:0000738!8.50e-33!140;CL:0002087!4.90e-32!119;CL:0002031!2.97e-28!124;CL:0000037!1.79e-25!172;CL:0000566!1.79e-25!172;CL:0000988!1.04e-23!182;CL:0002032!2.35e-21!165;CL:0000837!2.35e-21!165;CL:0000784!2.26e-16!3;CL:0000893!1.06e-10!2;CL:0002489!1.06e-10!2;CL:0000809!1.06e-10!2;CL:0000808!1.06e-10!2;CL:0000894!1.06e-10!2;CL:0000806!1.06e-10!2;CL:0000807!1.06e-10!2;CL:0000805!1.06e-10!2;CL:0002425!1.06e-10!2;CL:0000134!1.04e-08!358;CL:0002320!2.06e-08!365;CL:0000624!5.22e-08!6;CL:0000451!1.24e-07!10;CL:0000219!2.32e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.06e-91;24!CL:0000236;1.52e-75;13!CL:0000784;3.03e-30;3!CL:0000542;9.46e-26;53!CL:0000451;1.10e-08;10!CL:0000738;9.59e-08;136!CL:0002087;2.34e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.92e-91,24;CL:0000826,4.92e-91,24;CL:0000236,2.47e-70,14;CL:0000838,6.42e-41,52;CL:0000542,4.17e-40,53;CL:0000051,4.17e-40,53;CL:0000784,3.35e-30,3;CL:0000738,1.14e-23,136;CL:0002087,2.00e-22,115;CL:0002031,2.13e-21,120;CL:0000037,1.06e-18,168;CL:0000988,1.27e-17,177;CL:0002032,2.39e-15,161;CL:0000837,2.39e-15,161;CL:0000451,1.13e-08,10;CL:0000134,1.89e-07,354;CL:0002320,3.00e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;9.46e-26;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.22e-11;1!DOID:0050177;4.22e-11;1!DOID:4960;4.22e-11;1!DOID:0070004;4.22e-11;1!DOID:0050427;4.22e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.91e-11,1;DOID:0050177,4.91e-11,1;DOID:0050427,4.91e-11,1;DOID:4960,6.00e-11,1;DOID:0070004,6.00e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.22e-11!4;UBERON:0005058!2.22e-11!4;UBERON:0009113!2.22e-11!4;UBERON:0003295!2.22e-11!4;UBERON:0005562!2.22e-11!4;UBERON:0002384!5.26e-08!375;UBERON:0003351!9.55e-08!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.64e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,2.38091709404843,2.36132343941038,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29096936716765,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,1.63841583378639,2.66852776159066,0,1.60158394814405,6.8970292794538,1.32208974556972,4.77026877267682,2.84606484554724,4.11066032559657,2.29363936875137,2.64342657158052,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33886874027479,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p@chr10:112115232..112115242,+ | |||
}} |
Revision as of 04:57, 11 January 2014
Short description: | p@chr10:112115232..112115242, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:112115232..112115242, + |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.92e-91 | 24 |
pro-B cell | 4.92e-91 | 24 |
B cell | 2.47e-70 | 14 |
lymphoid lineage restricted progenitor cell | 6.42e-41 | 52 |
lymphocyte | 4.17e-40 | 53 |
common lymphoid progenitor | 4.17e-40 | 53 |
plasmacytoid dendritic cell | 3.35e-30 | 3 |
leukocyte | 1.14e-23 | 136 |
nongranular leukocyte | 2.00e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.13e-21 | 120 |
hematopoietic stem cell | 1.06e-18 | 168 |
hematopoietic cell | 1.27e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.39e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-15 | 161 |
dendritic cell | 1.13e-08 | 10 |
mesenchymal cell | 1.89e-07 | 354 |
connective tissue cell | 3.00e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.64e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.91e-11 | 1 |
monogenic disease | 4.91e-11 | 1 |
xeroderma pigmentosum | 4.91e-11 | 1 |
bone marrow cancer | 6.00e-11 | 1 |
myeloma | 6.00e-11 | 1 |