FFCP PHASE1:Hg19::chr10:90974582..90974590,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90974582..90974590,- | |||
|id=chr10:90974582..90974590,- | |||
|ontology_enrichment_celltype=CL:0002009!2.97e-09!65;CL:0000235!4.17e-09!10;CL:0002194!9.58e-09!63;CL:0000576!9.58e-09!63;CL:0000040!9.58e-09!63;CL:0000559!9.58e-09!63;CL:0000557!5.85e-08!71;CL:0000839!2.67e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000840;4.86e-43;5!CL:0000235;8.03e-43;6!CL:0000990;5.12e-29;8!CL:0000451;6.61e-24;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,5.62e-43,5;CL:0001029,5.62e-43,5;CL:0000235,7.48e-43,6;CL:0000990,5.64e-29,8;CL:0000451,7.14e-24,10;CL:0002194,3.11e-17,59;CL:0000576,3.11e-17,59;CL:0000040,3.11e-17,59;CL:0000559,3.11e-17,59;CL:0002009,1.09e-16,61;CL:0000839,1.82e-15,66;CL:0000557,3.04e-15,67;CL:0000766,3.22e-14,72;CL:0000763,1.35e-09,108;CL:0000049,1.35e-09,108;CL:0002087,5.00e-09,115;CL:0002031,1.16e-08,120;CL:0000738,1.15e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.14e-10;3!DOID:127;1.14e-10;3!DOID:0060072;2.52e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.09e-10,3;DOID:127,1.09e-10,3;DOID:0060072,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004765!2.78e-07!101;UBERON:0001434!2.78e-07!101;UBERON:0002371!4.02e-07!80;UBERON:0001474!8.11e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-13,76;UBERON:0001474,1.55e-12,82;UBERON:0004765,1.86e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0002390,1.51e-10,98;UBERON:0003061,1.51e-10,98;UBERON:0001434,2.42e-10,100;UBERON:0002193,1.35e-09,108 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.77272670290256,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0,0,0,2.92092654289215,4.17911369518241,5.85015026283007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0.468528891450678,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.19351266257817,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615349092722265,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0,0,0.8453114551668,0,0.187967835959707,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:90974582..90974590,- | |||
}} |
Revision as of 04:03, 11 January 2014
Short description: | p@chr10:90974582..90974590, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90974582..90974590, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 5.62e-43 | 5 |
common dendritic progenitor | 5.62e-43 | 5 |
macrophage | 7.48e-43 | 6 |
conventional dendritic cell | 5.64e-29 | 8 |
dendritic cell | 7.14e-24 | 10 |
monopoietic cell | 3.11e-17 | 59 |
monocyte | 3.11e-17 | 59 |
monoblast | 3.11e-17 | 59 |
promonocyte | 3.11e-17 | 59 |
macrophage dendritic cell progenitor | 1.09e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.82e-15 | 66 |
granulocyte monocyte progenitor cell | 3.04e-15 | 67 |
myeloid leukocyte | 3.22e-14 | 72 |
myeloid cell | 1.35e-09 | 108 |
common myeloid progenitor | 1.35e-09 | 108 |
nongranular leukocyte | 5.00e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-08 | 120 |
leukocyte | 1.15e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-13 | 76 |
bone element | 1.55e-12 | 82 |
skeletal element | 1.86e-11 | 90 |
immune system | 4.26e-11 | 93 |
hematopoietic system | 1.51e-10 | 98 |
blood island | 1.51e-10 | 98 |
skeletal system | 2.42e-10 | 100 |
hemolymphoid system | 1.35e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.09e-10 | 3 |
leiomyoma | 1.09e-10 | 3 |
benign neoplasm | 2.43e-08 | 4 |