FFCP PHASE1:Hg19::chr10:85933549..85933568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31428 | |||
|TSSclassifier=not | |||
|UniProt=Q6UWK7 | |||
|association_with_transcript=0bp_to_NM_207373,uc001kcu.2_5end | |||
|coexpression_cluster_id=C1595 | |||
|description=CAGE_peak_1_at_C10orf99_5end | |||
|id=chr10:85933549..85933568,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.87e-13!43;CL:0000622!2.47e-10!5;CL:0000453!5.29e-09!5;CL:0000244!1.03e-08!4;CL:0000731!1.03e-08!4;CL:0000154!1.68e-08!6;CL:0002159!4.30e-08!13;CL:0000223!4.97e-08!59;CL:0002251!6.92e-08!21;CL:0002368!6.51e-07!13;CL:0002623!8.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000622;6.80e-14;5!CL:0000453;7.79e-12;5!CL:0000244;1.26e-11;4!CL:0000731;1.26e-11;4!CL:0000154;1.68e-11;6!CL:0002623;6.29e-09;3!CL:0002159;2.68e-08;14!CL:0002328;1.32e-07;3!CL:0000150;1.66e-07;9!CL:0002076;1.87e-07;42!CL:0000362;5.63e-07;9!CL:0000240;7.93e-07;6!CL:0000311;7.93e-07;6!CL:0000079;7.93e-07;6!CL:0000237;7.93e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,6.72e-14,5;CL:0000453,4.99e-12,5;CL:0000244,1.26e-11,4;CL:0000731,1.26e-11,4;CL:0000154,1.67e-11,6;CL:0002623,6.13e-09,3;CL:0002159,2.58e-08,14;CL:0002076,2.83e-08,42;CL:0002328,1.61e-07,3;CL:0000150,1.65e-07,9;CL:0000362,5.41e-07,9;CL:0000240,7.62e-07,6;CL:0000311,7.62e-07,6;CL:0000079,7.62e-07,6;CL:0000237,7.62e-07,6;CL:0000036,7.62e-07,6;CL:0000357,7.62e-07,6;CL:0000114,7.62e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;7.93e-07;6!CL:0000114;7.93e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.03e-11!169;UBERON:0000925!6.03e-11!169;UBERON:0006595!6.03e-11!169;UBERON:0000161!2.07e-09!35;UBERON:0000166!2.50e-08!21;UBERON:0001004!3.37e-08!72;UBERON:0004921!2.33e-07!129;UBERON:0004185!2.33e-07!129;UBERON:0001007!2.46e-07!155;UBERON:0001555!2.46e-07!155;UBERON:0007026!2.46e-07!155;UBERON:0001008!3.34e-07!45;UBERON:0000365!6.43e-07!5;UBERON:0000165!7.76e-07!28;UBERON:0000930!7.76e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.79e-09;5!UBERON:0004921;1.04e-08;33!UBERON:0005910;1.02e-07;6!UBERON:0004815;1.32e-07;3!UBERON:0002031;1.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.39e-10,160;UBERON:0000925,1.39e-10,160;UBERON:0006595,1.39e-10,160;UBERON:0000365,2.79e-09,5;UBERON:0000161,5.43e-08,36;UBERON:0005910,1.03e-07,6;UBERON:0004815,1.61e-07,3;UBERON:0002031,1.61e-07,3;UBERON:0004921,2.39e-07,118;UBERON:0003102,3.40e-07,99;UBERON:0001007,8.69e-07,145;UBERON:0001555,8.69e-07,145;UBERON:0007026,8.69e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80079311156766,4.35133124084712,4.09296062831132,0,0,0,3.67768489791571,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,27.6864419102332,45.9772709052692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.3614494563824,0,0,0,0,1.06400514659507,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,2.72746120590835,0,0,0,0,0,0,0,0,7.07565032012174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,3.84125998930189,6.74410519545717,1.3068766413512,10.1847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.184161977871793,0,0,0,0.451199612907412,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,1.52925763827023,0,0,0,0,0,0,0,1.33953315142039,0,0,57.4265537996172,41.6038557463374,0,0,0,0,0,0,0,0,0,2.64455864577565,0.192190067365106,1.02090169995667,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,2.2594512186427,21.9557740062327,166.786760910949,75.8265562547715,12.4050636111758,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7944634668775,0,1.22896305723383,0,1.00109485027145,0,0,0,0,0,0,0.18714054040822,0,0,1.22587722705226,0,0,0,0,0,0,0,0,0,0.398495976502139,137.865673850043,0,0,0,0,0,0,0,15.7829449019094,0,0,0,0,0,0,0,0,3.18621655199399,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,48.2406155203967,64.099565333663,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,77.5355838755952,0,0,420.995796846208,54.7552324275669,477.825573338095,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,10.5831789207528,0,0,0,0,0,0,246.934035979516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,1.799791132412,1.5476039091159,0,41.9293359499083,2.99461687736953,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74267916555066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04066957402104,1.99297260470045,6.21548498172208,0,0,0,0,0,0,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,2.56800037930351,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,6.45074531906083,0,0.255524855279191,0,0,0,0,0,1.03710588800201,0,0,0,0,0,17.8964251699172,0,0.560544326627578,95.881665653497,15.3308589765221,1.43325506366115,0,0,0,0,0,7.25256574570629,10.5845455798249,255.0748152094,0.860454717640555,0,0,0,0,0,0,5.36906072629403,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,3.55001127296545,0.437119121007915,0,6.37385636560154,0,0,0,0.4226557275834,0,0,0,2.09876427442351,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,62.4775566969874,0.23806443146374,0.452122368852043,1.48979314310059,0,0,0,251.245127073093,22.2451645705433,56.171612214166,46.1891002728836,2.66128285236811,0,0,0,0,14.0784565442073,7.45672809515485,72.8344159185172,23.9672438706785,0.201273793591026,0.641136984606466 | |||
|short_description=p1@C10orf99 | |||
}} |
Revision as of 03:52, 11 January 2014
Short description: | p1@C10orf99 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C10orf99_5end |
Coexpression cluster: | C1595_colon_esophagus_tongue_salivary_Urothelial_appendix_rectum |
Association with transcript: | 0bp_to_NM_207373, uc001kcu.2_5end |
EntrezGene: | C10orf99 |
HGNC: | 31428 |
UniProt: | Q6UWK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 6.72e-14 | 5 |
Langerhans cell | 4.99e-12 | 5 |
transitional epithelial cell | 1.26e-11 | 4 |
urothelial cell | 1.26e-11 | 4 |
protein secreting cell | 1.67e-11 | 6 |
acinar cell of salivary gland | 6.13e-09 | 3 |
general ecto-epithelial cell | 2.58e-08 | 14 |
endo-epithelial cell | 2.83e-08 | 42 |
bronchial epithelial cell | 1.61e-07 | 3 |
glandular epithelial cell | 1.65e-07 | 9 |
epidermal cell | 5.41e-07 | 9 |
stratified squamous epithelial cell | 7.62e-07 | 6 |
keratin accumulating cell | 7.62e-07 | 6 |
stratified epithelial cell | 7.62e-07 | 6 |
keratinizing barrier epithelial cell | 7.62e-07 | 6 |
epithelial fate stem cell | 7.62e-07 | 6 |
stratified epithelial stem cell | 7.62e-07 | 6 |
surface ectodermal cell | 7.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.39e-10 | 160 |
endoderm | 1.39e-10 | 160 |
presumptive endoderm | 1.39e-10 | 160 |
urothelium | 2.79e-09 | 5 |
orifice | 5.43e-08 | 36 |
transitional epithelium | 1.03e-07 | 6 |
lower respiratory tract epithelium | 1.61e-07 | 3 |
epithelium of bronchus | 1.61e-07 | 3 |
subdivision of digestive tract | 2.39e-07 | 118 |
surface structure | 3.40e-07 | 99 |
digestive system | 8.69e-07 | 145 |
digestive tract | 8.69e-07 | 145 |
primitive gut | 8.69e-07 | 145 |