FFCP PHASE1:Hg19::chr10:80737664..80737698,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr10:80737664..80737698,- | |||
|id=chr10:80737664..80737698,- | |||
|ontology_enrichment_celltype=CL:0002194!3.29e-20!63;CL:0000576!3.29e-20!63;CL:0000040!3.29e-20!63;CL:0000559!3.29e-20!63;CL:0002009!6.11e-19!65;CL:0000048!6.04e-18!430;CL:0000723!8.24e-17!436;CL:0000034!3.22e-16!444;CL:0000839!3.97e-16!70;CL:0000860!5.19e-16!45;CL:0000557!1.28e-15!71;CL:0002320!1.63e-15!365;CL:0002057!4.06e-15!42;CL:0000134!1.36e-14!358;CL:0002371!5.74e-14!591;CL:0000766!2.55e-13!76;CL:0000219!4.03e-13!390;CL:0000144!8.60e-13!625;CL:0000012!2.03e-12!682;CL:0000548!2.44e-12!679;CL:0000004!2.44e-12!679;CL:0000255!2.44e-12!679;CL:0000057!2.36e-09!75;CL:0000055!2.81e-09!180;CL:0000235!2.90e-07!10;CL:0000063!3.64e-07!578;CL:0002334!3.69e-07!12;CL:0000003!4.68e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.52e-33;39!CL:0000234;1.52e-33;39!CL:0000860;1.10e-32;33!CL:0002057;1.10e-32;33!CL:0000576;1.82e-14;48!CL:0000766;3.14e-11;69!CL:0000235;6.11e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.46e-34,59;CL:0000576,6.46e-34,59;CL:0000040,6.46e-34,59;CL:0000559,6.46e-34,59;CL:0000473,1.14e-33,48;CL:0000234,1.14e-33,48;CL:0002009,2.30e-32,61;CL:0000839,6.66e-29,66;CL:0000557,2.84e-28,67;CL:0000766,2.15e-25,72;CL:0000860,2.37e-25,42;CL:0002057,2.37e-25,42;CL:0002320,2.58e-20,361;CL:0000134,6.99e-20,354;CL:0000219,6.75e-19,386;CL:0000048,1.54e-17,427;CL:0000723,7.06e-17,433;CL:0000034,1.38e-16,441;CL:0000763,1.04e-13,108;CL:0000049,1.04e-13,108;CL:0002087,4.21e-12,115;CL:0002031,4.11e-11,120;CL:0000235,6.17e-11,6;CL:0000738,1.69e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;9.53e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.06e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.02e-16!375;UBERON:0002371!5.49e-16!80;UBERON:0002405!1.09e-15!115;UBERON:0002204!5.05e-14!167;UBERON:0001474!6.64e-14!86;UBERON:0004765!1.51e-13!101;UBERON:0001434!1.51e-13!101;UBERON:0002193!1.51e-09!112;UBERON:0002390!2.07e-09!102;UBERON:0003061!2.07e-09!102;UBERON:0000926!1.98e-08!448;UBERON:0004120!1.98e-08!448;UBERON:0006603!1.98e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.38e-28,76;UBERON:0001474,8.62e-25,82;UBERON:0004765,9.67e-24,90;UBERON:0002384,7.91e-22,371;UBERON:0002405,2.18e-21,93;UBERON:0001434,3.84e-21,100;UBERON:0002390,1.65e-18,98;UBERON:0003061,1.65e-18,98;UBERON:0002193,1.61e-16,108;UBERON:0002204,1.85e-13,167;UBERON:0000926,2.95e-09,315;UBERON:0004120,2.95e-09,315;UBERON:0006603,2.95e-09,315;UBERON:0003081,1.11e-07,203 | |||
|phase1_expression=0.726713517082227,3.63970890614671,1.40954404095971,0,1.34088328328186,0.872338524100369,0,2.52687949370732,0,1.47440361900905,0,0,0,1.48519623552056,0,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,3.2389366601898,0.515151135268373,5.81592955118259,12.0920301980419,5.57943340731977,7.20530014407622,26.3147448333969,19.5115013663915,6.04154023876516,11.2710710872804,8.27687804610048,3.44745680736619,14.2006630388442,9.47985406160392,9.78860165621544,30.019676506363,17.5284317867166,8.26426509401437,20.53945773287,9.59005688698562,0.989553900560148,6.38283704389222,0.852449501065388,10.7377418292576,27.8018760098659,19.3074897188628,11.3061899365534,14.0800387973454,6.5156653411535,9.08099253950053,18.7821594353658,7.59509729858123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,1.0843174571537,0.50133791063589,1.01392563272577,2.3858578411533,0,0.378139268656271,0.443458794925128,0.43917392846563,0.196468613246569,0,0,10.7100639906045,9.22887607686116,23.0017271697637,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,2.91300197789081,0.860509862246441,0,0,0,0.98667019366864,0.622422070799533,0.538842688278752,0.163461903113459,0.756787138224657,0,0.70296429550139,1.24864030732128,0,2.69007624993242,0,0,0.140450806702248,0.816616685019573,0.122834317311768,1.44656093646072,0,0.494533858557114,1.82032272387605,0.718618141816238,0,0.250237039743928,0.277064115484183,0.438977620880838,0.612975591598039,3.30523729594513,0,0.717558542755448,0.427114777637135,2.33125091275518,0,0.515262646192195,2.83404594050192,1.30281799432113,1.0126579934476,1.26668106709558,1.26216887122057,1.10459878370759,0,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0.505754070234305,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,3.9313088667105,1.77236972004421,0,0.368965315629341,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0.288732895522148,0,0.190254152234598,0,0,14.0343693469816,100.153825479594,42.3598812522876,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45770409648969,0.43596006883328,0.66004457238855,4.13669490424889,3.57656445851882,0,2.12750493267896,1.04007436911366,1.28603687131071,0,0.532844358032199,0.857867961948885,0.542621605391443,0.823240336780769,1.62868092146868,0,0,0.904318131178758,0,0.299918973546171,27.9734695474738,3.51579964002488,42.1667878966063,0.479249710983165,1.14861935834114,0,1.44781306667579,4.72595541865882,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,0,1.03985430765404,1.07057393278297,0.157702415033935,0.234282829985426,0.300946099727719,0,2.0694614258501,0,0,0.521301686808497,0.391602314925481,0.343143423810856,0,0.215714200818617,0,0,0,0,1.98486246255021,3.6830873589135,0.841980283299221,0.768834895534206,0.511707249066704,1.93024705372329,7.42090332224955,1.07946785661859,1.9531789784444,0.492762936082855,1.55776328755086,0.813472649219715,0,0,0,0.34444334449382,0.364182336013434,1.31124414959424,1.35359883872224,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0.165018999841176,0.574265537996172,0,0,0,0.770243085573222,0.614014698904518,0.689182862422653,1.28904293841928,1.45016693914229,1.02271952899321,0,0,0,1.78657797492418,0.10115778085555,0.929691098594572,2.83331112147576,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0.744316738719335,0.316379424718726,0.571890581771475,0,0,2.22742273548156,0,1.79872457583315,0.54907405947211,0.589062011728432,0,0,0,0,0.487426979262569,0,1.22849920267187,0.565621727814851,0,0,0.66343897524122,0,0.578775534266688,0,0,0.6196469961995,0,0.430234056612155,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,0,0.379473173765715,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12206413706918,0,0,0,0,0.278406173895242,0,0,0,0,0,2.3441308683503,0,0,0,0.23874448473769,0,0,0,0,0.556543525114529,2.47205811340139,0,0,0,0,1.1249555075237,0,0.311039587661807,0.179736702294654,1.07412704805365,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,5.81104484819706,0,0,0,0.31900115973192,0.641183153813036,0,0,0.31396051279005,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,1.45668227720456,0,0,0,0.442306057399416,0,0,0,0,0.313932918407225,1.19472429772959,0.284609546029793,0.277349346026277,0,0.587954384486266,0,0.34945333648406,0,0.290268993867255,1.24251839046515,0.656923656425674,0.0969890164884194,0,0,5.48167698587004,2.18586072873289,0.0633107959558787,0,2.48492342779755,0,0.19980960958213,0,0,0,0,1.36677789121976,3.29971648463514,0.135904206073614,0,1.73396969981747,7.22376474753797,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,1.49688046383725,1.31865373409866,1.61768505250044,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,2.89659637035217,0.453248366080503,0.293104467356165,0,0,0,0.684347351537318,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.249960815924213,0.303298235083296,0.285465333544967,0,0,0,2.08956724041624,0.934853239388898,0,7.19731420045339,7.79860495432983,0.889811221596536,2.97492088916001,1.66354016139563,2.95330681107283,3.10495814978231,1.59296767163702,20.6909431595258,1.24210365501008,0,1.32920857278997,1.5652351854352,0.601030435988874,0.380805212168795,2.44122439922797,2.54588122883583,1.39633724155235,7.88857391793439,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0.906823702049089,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0.512483037175893,0,1.21543982470953,0,0,0,0,0.327609848846413,2.70350199629091,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,3.04257927353179,0.11796972334774,0.550285795565037,0.924205329202706,0,0,0,0.451261970095544,1.0085253435176,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,19.0351690475535,0,0,0.236387681767936,0,0.313972371402056,0,0,0,2.80705868584208,1.43325506366115,0,0,0,0,0,0.828864656652147,0.17071847709395,0,0,1.18332000730565,2.13033511897894,0,0,4.34288939930048,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,0.891060215894309,0.808468755832877,0,0,0.336760265072938,0.0717222053926763,0,0.569822880276821,0.320182037633146,0,0.0898252021065869,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr10:80737664..80737698,- | |||
}} |
Revision as of 03:40, 11 January 2014
Short description: | p@chr10:80737664..80737698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80737664..80737698, - |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.46e-34 | 59 |
monocyte | 6.46e-34 | 59 |
monoblast | 6.46e-34 | 59 |
promonocyte | 6.46e-34 | 59 |
defensive cell | 1.14e-33 | 48 |
phagocyte | 1.14e-33 | 48 |
macrophage dendritic cell progenitor | 2.30e-32 | 61 |
myeloid lineage restricted progenitor cell | 6.66e-29 | 66 |
granulocyte monocyte progenitor cell | 2.84e-28 | 67 |
myeloid leukocyte | 2.15e-25 | 72 |
classical monocyte | 2.37e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-25 | 42 |
connective tissue cell | 2.58e-20 | 361 |
mesenchymal cell | 6.99e-20 | 354 |
motile cell | 6.75e-19 | 386 |
multi fate stem cell | 1.54e-17 | 427 |
somatic stem cell | 7.06e-17 | 433 |
stem cell | 1.38e-16 | 441 |
myeloid cell | 1.04e-13 | 108 |
common myeloid progenitor | 1.04e-13 | 108 |
nongranular leukocyte | 4.21e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.11e-11 | 120 |
macrophage | 6.17e-11 | 6 |
leukocyte | 1.69e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.38e-28 | 76 |
bone element | 8.62e-25 | 82 |
skeletal element | 9.67e-24 | 90 |
connective tissue | 7.91e-22 | 371 |
immune system | 2.18e-21 | 93 |
skeletal system | 3.84e-21 | 100 |
hematopoietic system | 1.65e-18 | 98 |
blood island | 1.65e-18 | 98 |
hemolymphoid system | 1.61e-16 | 108 |
musculoskeletal system | 1.85e-13 | 167 |
mesoderm | 2.95e-09 | 315 |
mesoderm-derived structure | 2.95e-09 | 315 |
presumptive mesoderm | 2.95e-09 | 315 |
lateral plate mesoderm | 1.11e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.06e-07 | 14 |