FFCP PHASE1:Hg19::chr10:75415742..75415801,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79933 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23532 | |||
|TSSclassifier=strong | |||
|UniProt=A6NCR3,Q9H987 | |||
|association_with_transcript=28bp_to_ENST00000372872,ENST00000394810_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_SYNPO2L_5end | |||
|id=chr10:75415742..75415801,- | |||
|ontology_enrichment_celltype=CL:0000188!2.31e-18!9;CL:0000594!1.41e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.54e-17;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.10e-17,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.63e-11;4!UBERON:0007284;2.63e-11;4!UBERON:0006603;9.21e-07;65 | |||
|ontology_enrichment_disease=DOID:114!4.32e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.06e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.09e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.85e-20!115;UBERON:0003978!1.22e-09!3;UBERON:0009751!1.22e-09!3;UBERON:0000946!1.22e-09!3;UBERON:0002523!1.22e-09!3;UBERON:0005983!1.22e-09!3;UBERON:0002165!1.22e-09!3;UBERON:0002062!1.22e-09!3;UBERON:0007280!1.22e-09!3;UBERON:0004151!1.29e-09!3;UBERON:0001134!7.56e-09!61;UBERON:0002036!7.56e-09!61;UBERON:0003082!7.56e-09!61;UBERON:0002385!1.94e-08!63;UBERON:0001015!1.94e-08!63;UBERON:0000383!1.94e-08!63;UBERON:0007100!2.58e-07!27;UBERON:0001630!2.78e-07!2;UBERON:0005090!2.78e-07!2;UBERON:0004290!3.34e-07!70;UBERON:0000341!3.73e-07!2;UBERON:0003104!6.22e-07!238;UBERON:0009142!6.22e-07!238;UBERON:0002081!6.65e-07!2;UBERON:0002133!7.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.09e-32;16!UBERON:0002036;1.09e-32;16!UBERON:0002385;1.54e-15;31!UBERON:0001015;1.54e-15;31!UBERON:0000383;1.54e-15;31!UBERON:0003978;6.46e-15;3!UBERON:0000946;6.46e-15;3!UBERON:0004151;7.27e-15;3!UBERON:0007100;5.64e-14;25!UBERON:0005090;5.28e-11;2!UBERON:0001630;5.28e-11;2!UBERON:0000341;8.75e-11;2!UBERON:0002081;2.10e-10;2!UBERON:0002133;2.37e-10;2!UBERON:0003127;6.69e-10;2!UBERON:0001829;9.20e-10;2!UBERON:0001723;1.73e-07;3!UBERON:0001033;1.73e-07;3!UBERON:0000948;3.06e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.81e-16,114;UBERON:0003978,6.94e-15,3;UBERON:0009751,6.94e-15,3;UBERON:0000946,6.94e-15,3;UBERON:0002523,6.94e-15,3;UBERON:0005983,6.94e-15,3;UBERON:0002165,6.94e-15,3;UBERON:0002062,6.94e-15,3;UBERON:0007280,6.94e-15,3;UBERON:0004151,7.62e-15,3;UBERON:0007100,8.28e-13,27;UBERON:0005090,5.28e-11,2;UBERON:0001630,5.28e-11,2;UBERON:0000341,8.55e-11,2;UBERON:0003103,1.56e-10,68;UBERON:0002081,2.21e-10,2;UBERON:0010227,2.21e-10,2;UBERON:0002133,2.54e-10,2;UBERON:0003127,6.40e-10,2;UBERON:0001829,1.01e-09,2;UBERON:0001723,1.73e-07,3;UBERON:0001033,1.73e-07,3;UBERON:0010056,1.73e-07,3;UBERON:0001134,7.75e-07,62;UBERON:0002036,7.75e-07,62;UBERON:0003082,7.75e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,8.82052268313252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,14.7551672238668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,2.51343867559517,1.07834031980251,1.84204409671355,2.61889487720608,0.214840489736547,0.870100163485371,2.55679882248303,21.01156041263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.7984788420067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,2.03676934625681,0,5.19755703795225,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4146985157751,50.8736141305938,5.0251111720377,24.1611590603779,54.9409341614811,48.2050348074445,25.4625360724693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.3053756659216,30.4562306368099,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,6.40044423461046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,43.1703725198686,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.7428837187895,97.6323293202909,106.702927683114,11.6570638334193,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,3.21110498383179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,76.9774674662541,24.5206364407653,0,0,0,1.90941474834495,2.22328907854041,40.2775983609379,59.5485943888389,3.63701086278773,1.43444410785353,8.64916927019635,0,0,0,0,11.7320471201727,0,0,0,2.41528552309231,0 | |||
|short_description=p1@SYNPO2L | |||
}} |
Revision as of 03:31, 11 January 2014
Short description: | p1@SYNPO2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNPO2L_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 28bp_to_ENST00000372872, ENST00000394810_5end |
EntrezGene: | SYNPO2L |
HGNC: | 23532 |
UniProt: | A6NCR3Q9H987 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.10e-17 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.81e-16 | 114 |
valve | 6.94e-15 | 3 |
cardiac mesenchyme | 6.94e-15 | 3 |
cardial valve | 6.94e-15 | 3 |
tunica intima | 6.94e-15 | 3 |
heart layer | 6.94e-15 | 3 |
endocardium | 6.94e-15 | 3 |
endocardial cushion | 6.94e-15 | 3 |
presumptive endocardium | 6.94e-15 | 3 |
cardiac chamber | 7.62e-15 | 3 |
primary circulatory organ | 8.28e-13 | 27 |
muscle structure | 5.28e-11 | 2 |
muscle organ | 5.28e-11 | 2 |
throat | 8.55e-11 | 2 |
compound organ | 1.56e-10 | 68 |
cardiac atrium | 2.21e-10 | 2 |
future cardiac atrium | 2.21e-10 | 2 |
atrioventricular valve | 2.54e-10 | 2 |
open tracheal system trachea | 6.40e-10 | 2 |
major salivary gland | 1.01e-09 | 2 |
tongue | 1.73e-07 | 3 |
gustatory system | 1.73e-07 | 3 |
future tongue | 1.73e-07 | 3 |
skeletal muscle tissue | 7.75e-07 | 62 |
striated muscle tissue | 7.75e-07 | 62 |
myotome | 7.75e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.09e-10 | 2 |