FFCP PHASE1:Hg19::chr10:74856613..74856631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8546 | |||
|TSSclassifier=strong | |||
|UniProt=P13674 | |||
|association_with_transcript=-5bp_to_ENST00000307116,ENST00000373008_5end | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_1_at_P4HA1_5end | |||
|id=chr10:74856613..74856631,- | |||
|ontology_enrichment_celltype=CL:0000055!5.54e-14!180;CL:0000048!6.91e-11!430;CL:0000723!5.30e-10!436;CL:0000034!1.17e-09!444;CL:0000359!1.90e-09!32;CL:0000057!5.39e-09!75;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000192!1.78e-08!42;CL:0000514!1.78e-08!42;CL:0000187!1.26e-07!54;CL:0002620!7.26e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.08e-09;32!CL:0002620;7.15e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.31e-11,427;CL:0000723,1.09e-10,433;CL:0000034,2.49e-10,441;CL:0000359,1.90e-09,32;CL:0000057,1.92e-09,76;CL:0000680,2.73e-08,58;CL:0000056,2.73e-08,58;CL:0000355,2.73e-08,58;CL:0000192,3.34e-08,43;CL:0000514,3.34e-08,43;CL:0000187,2.02e-07,55;CL:0002620,7.26e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.87e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.89e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.87e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.12e-09!61;UBERON:0002036!2.12e-09!61;UBERON:0003082!2.12e-09!61;UBERON:0000914!3.38e-09!83;UBERON:0002329!3.38e-09!83;UBERON:0003077!3.38e-09!83;UBERON:0003059!3.38e-09!83;UBERON:0007282!3.38e-09!83;UBERON:0009618!3.38e-09!83;UBERON:0007285!3.38e-09!83;UBERON:0004290!4.54e-09!70;UBERON:0002385!7.50e-09!63;UBERON:0001015!7.50e-09!63;UBERON:0000383!7.50e-09!63;UBERON:0000486!4.95e-08!82;UBERON:0001637!2.35e-07!42;UBERON:0003509!2.35e-07!42;UBERON:0004572!2.35e-07!42;UBERON:0004573!5.21e-07!33;UBERON:0004571!5.21e-07!33;UBERON:0004872!6.68e-07!84;UBERON:0002204!9.45e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.56e-09,62;UBERON:0002036,3.56e-09,62;UBERON:0003082,3.56e-09,62;UBERON:0007524,6.63e-09,73;UBERON:0002329,7.14e-09,71;UBERON:0003059,7.14e-09,71;UBERON:0007282,7.14e-09,71;UBERON:0004290,7.14e-09,71;UBERON:0009618,7.14e-09,71;UBERON:0002385,1.21e-08,64;UBERON:0001015,1.21e-08,64;UBERON:0000383,1.21e-08,64;UBERON:0003077,1.75e-08,72;UBERON:0007285,1.75e-08,72;UBERON:0000926,6.36e-08,315;UBERON:0004120,6.36e-08,315;UBERON:0006603,6.36e-08,315;UBERON:0000486,7.11e-08,83;UBERON:0001637,2.35e-07,42;UBERON:0003509,2.35e-07,42;UBERON:0004572,2.35e-07,42;UBERON:0002204,3.08e-07,167;UBERON:0005256,5.07e-07,122;UBERON:0004573,5.21e-07,33;UBERON:0004571,5.21e-07,33;UBERON:0002384,5.68e-07,371 | |||
|phase1_expression=191.307333371896,194.189175169122,278.666856897735,146.10701559557,171.186099165651,477.169172682902,70.923965887127,113.077857343403,36.3048023197776,28.505136634175,16.7472280313383,25.1207577949698,19.2549894106771,74.259811776028,81.8551518047952,70.5941403774364,72.9260378909012,67.9188384060257,69.286457428252,6.1560529038394,6.9360235023046,34.4800193625897,22.0401710090914,14.23494020758,31.0090319799163,136.550756071589,96.7144943720361,120.899760097811,14.1611139665605,19.5752993029578,31.1180407865313,59.7623795911303,40.0603871975073,35.1266309658448,25.5641761914995,99.5184627411951,21.4328320714438,49.3055913593371,44.5208673383715,46.2233154624764,70.981205334056,57.3291788853594,77.7878214255243,28.7888512783538,32.4973311572376,41.9670425854922,45.7885202704199,53.0406575548155,61.9412741790207,40.8523197097454,42.7788379903598,51.0801616559344,101.355230136566,96.8227025375739,102.9241298117,36.3307715317227,41.4817348087926,48.3155491556932,61.5228623665514,64.5067344422948,72.2450952152917,32.9851300186716,33.9088217956774,36.6553285458117,63.8460324982885,78.8665462320684,93.4233373493363,47.2347490682677,56.3201551893818,40.6143139598568,74.4641388239044,76.970025921401,98.1033401066742,34.8571222414704,33.3788750945118,27.884599852614,30.2164017784072,30.4859092468258,46.128243382062,28.7862871178661,33.2190850922481,41.0994345970426,33.4392864476513,26.7607919518444,22.2377313465889,26.0305435765569,21.2209873129087,22.4153451582248,24.4586602930399,21.9432363543134,50.0907412816315,34.0597569835145,34.7868637593958,11.8954195721123,19.6177997043538,15.2762769169545,22.0314942527493,24.7596780531974,38.2418788139087,13.8764791174263,11.0813570655421,13.2565385605725,3.89653456815823,24.7331214285085,13.2572658363677,12.4058980966828,14.8942125070759,17.4204194826918,17.5580119205836,10.3595879900316,13.8175008892924,13.0411388580774,13.7906503740716,11.5042556078577,16.7256838087963,36.1456803205236,18.0113631992903,16.4941173831662,15.4342012131897,14.3354436445844,12.370585623272,18.0585888445191,15.0575119077773,12.6706745042874,16.240994451805,13.969857870597,14.7803039445788,42.1358093339691,43.0578715211447,37.3646962017621,39.0090986102339,61.0337782330309,497.64109069502,155.057396372979,266.711768458293,211.620764201763,551.133161306412,691.021515829743,24.6735872798217,35.9201623889354,36.7149404197267,33.2031956386702,9.83597278389864,14.0898088258083,88.6014384677286,110.049993973137,87.8852119029699,36.4890655187173,36.0356793791481,25.2591100904104,49.4918394343096,29.2479762336082,43.3925627009493,35.0490923992886,33.1404554605826,24.485505732666,29.4682902816903,73.9071931224281,83.9608379940636,184.431057633333,16.516002001475,23.5684352772739,20.0130887189499,36.7663080345869,51.0389427165509,30.6298068014394,26.0454072246357,30.6303226914636,18.397996495906,18.9853131913626,33.8923226271253,39.534125230819,42.6558290563158,26.6017371806946,667.433331126813,173.737062003803,347.17687209226,542.981723077504,125.907275680417,163.717859241554,170.798393167528,178.833972602441,131.642267974101,99.8206080036389,88.1059657781543,83.5493000600021,188.40952730496,18.5113931148699,76.1670587465982,41.0739711512003,71.2870206232091,52.8455243896942,62.6448294704669,60.6747484953714,92.0735312359569,42.6235081071835,99.6060530534379,117.612282870923,122.149863063607,22.7540340484507,13.6537446945085,56.2242620606581,53.0502524257128,75.3614394116978,71.5533522035766,65.8948760967892,110.725449414162,175.819883898033,319.492941161863,654.766954117728,512.239405102661,331.000478981096,277.726566297593,356.316866883105,347.107937058415,415.021000981274,341.809014105485,245.113194791035,426.467180409773,108.78779623906,677.3583025217,301.248773700644,193.977317603198,53.1467346199066,76.3689137654337,65.1046431533039,41.2271126718032,39.8914602647671,191.836199677575,146.369409681703,105.722436516888,23.7235283399289,82.9182521348025,122.215778256648,40.0591271922194,61.2965665002212,89.5130557270286,29.9316204100805,31.8625064247612,27.2342463768335,32.6470159287886,39.2182999366331,38.6751109151087,31.6853574176386,33.9463134666849,33.0882554973896,5.90524363699719,37.8652789269304,21.4018485892328,17.641045366265,135.627887259359,17.6908899001973,261.719928659862,23.8390073683911,49.810317609961,234.533196678084,55.3141438459473,16.8602629886429,56.7988694125714,47.4052839211672,18.2452650973782,28.0782392025486,157.321162807548,109.554232701448,278.493422727369,32.3380842984805,28.2421162671733,34.6262557066969,32.3983803163303,20.6036678902769,145.268033591564,68.3292454206574,94.5294192156312,46.8669169933885,65.8489942539529,78.118078580555,66.0046312319992,43.5950907770943,55.2071057997904,210.367202581568,40.0620374760178,225.158333477278,139.219875000785,236.199592940757,25.0816682454068,24.829247661288,16.4104426094066,27.3715913636328,93.778673345431,51.9593490069977,34.0133454830388,22.8747412064536,73.6772516328243,95.8531395679817,307.666683503511,17.8828222925941,58.325889926364,165.413508515789,183.053088964004,18.2617235726121,15.6034045225606,17.0510194570304,626.815524197319,48.2933228798384,39.5155361654769,59.2839855414598,522.426164651542,61.7722460888075,205.883094531697,132.473085707245,123.766563083387,76.62298180395,116.523645212253,113.850327320837,237.947481503142,178.036000542877,74.1711906211736,214.276333868017,148.148428558826,169.570732188181,60.0776371805306,52.2131514535107,47.2224388942343,48.3853246774651,33.0323011489202,15.6167824629146,10.05275456611,5.52803675603351,14.6725912880228,27.7132598860457,32.9077605124427,32.3244100480108,142.567513377641,57.5196099218629,142.956667489761,300.933836635078,240.700705887371,130.419897233064,350.252830828212,308.469752220912,54.5778009734364,72.4311499047534,139.487375692442,168.144681710033,120.073155194891,24.2793435253798,24.7063265143816,33.082884179662,26.1014182990526,22.9464249277405,31.8283950018572,58.252403828674,53.5230819193534,265.227246558272,271.013844826718,188.042263270159,432.341489588735,219.010702600549,433.179609639735,296.836132889982,50.8891989548763,179.514904291571,63.4021644426607,76.8496555191759,53.6891948485012,61.3966003925441,163.412773297177,43.8305507334867,122.6218306398,103.609874595822,92.5738369613534,7.670393419426,128.92367431279,7.84349769176855,1.46139224653261,166.454918764065,9.09867072567173,13.2673090115682,33.6828829119337,10.7959076883203,11.9216432519295,10.5354852509519,7.39141191830611,9.14183609821597,6.94011739638753,4.82371728621056,3.13722541229881,83.3462906628265,12.1365418908891,33.5139746504232,278.416813472146,101.550536483543,83.0045569201115,51.1096328816593,29.2527110716435,520.615932695077,38.1849337253882,41.7471752380686,46.8186207914695,46.4509249272868,71.1122021027971,71.058180017972,33.4940645745277,153.936389633209,207.597853693389,137.800278300781,216.941611240793,142.834786568036,107.84416743697,2728.79342232799,178.441541161114,215.931539703438,88.3628010326256,180.07612935954,234.620461385563,440.967776052075,84.1077914752848,69.9198528628384,119.715761784162,9.46821827851935,41.5100818392903,160.692640202598,193.097365489011,102.167555907323,116.678237637823,91.5402366225984,84.7144597792194,185.45707577242,96.8894449349657,17.0671808681357,297.81788432943,156.362217199998,264.809828131492,256.226642700128,131.089415279482,210.070195891073,239.50147006208,326.207458628799,18.520817096534,77.3955807415027,258.10199949656,108.128400836813,145.918322111701,76.1514280203513,278.437782231185,248.599722882431,113.878301566662,119.064706307883,150.817060975635,23.5273367734743,30.4443206613135,56.4823801698756,41.5587410832188,26.1338363667174,281.678251924123,24.9693116149313,23.5860065934676,38.1349932041541,104.29442369396,12.6861902308042,17.5866557642746,23.3555346741407,19.0585420366231,17.2772154696202,22.0480925805524,25.9215089874295,20.621254583651,33.3291101917716,13.474717973687,30.87506721361,31.029130245995,56.120723847837,60.8974179062425,20.0877103638316,35.7247074864742,24.7041927470753,136.741134439628,159.389372674807,73.8496578438397,18.943478359755,28.6724209264633,40.1015163344107,26.4095173370501,10.1170487315331,18.1619736471943,31.5126215890841,60.8004460217704,48.8512815250448,34.2224445075396,40.7111905777057,17.7803166815857,31.1814914762671,12.3087398947712,19.2023531717948,35.9717725437646,21.1480507631774,143.536794493105,83.8026785435234,150.972489056395,77.34170868857,40.0631966997042,212.482591416544,64.4413357406826,168.631225452478,37.7776106151193,83.5576333478446,75.1333758904615,54.8796901175109,26.8129268322552,163.582598354128,27.3521076375836,126.974104918555,21.169617277946,264.878501352222,381.334534473376,30.4653710389438,28.1063244240706,31.2059145838392,163.254836329125,23.948309234694,64.4594542838894,19.3866549219044,25.1401546018617,25.9497937401552,19.7925098424777,226.696319990139,232.724863714569,113.452067940643,40.4263303965498,22.6932174497219,58.2616300778075,126.848006821716,34.8986239815917,51.3730003772027,71.3930916662415,27.464712537075,52.0828314276068,26.8948333247728,37.5149029133293,15.3603233561776,30.9520712298499,48.2478120818808,82.6079904890759,25.5925933870747,51.7901608244385,132.441146372928,231.913843125105,116.970126774178,285.17360516997,21.4605926211047,89.4787461451641,24.1006938755227,156.112197147089,200.571972607048,183.596816151572,44.9716346556319,49.2703394839174,39.245640002213,176.29143281188,60.0750553594248,32.4582959613137,43.7915249674542,53.7821992180302,257.85472116199,99.9276203653696,125.911653786486,132.720297821434,53.853505251561,105.137671796141,37.4823113160543,24.0840321764679,11.9355417548575,71.8629923420915,36.6963494649933,59.2854508638453,12.5489832268501,51.0547563398183,38.9337656283536,22.7077139159971,55.1662714346964,63.5504555280958,80.9946929490641,69.2940092683161,75.1369201518653,38.1355350786131,72.5479706240847,44.4885484261275,104.035751863581,60.4554272117424,60.7110694624806,31.5425640002418,28.35865502944,30.218488195581,55.0897613654222,92.0511401392348,194.795398552819,67.6987107754949,75.3128378354331,20.5760086856606,17.0129702979279,112.38266599265,34.1524791582964,11.7887669653457,46.5412047407762,34.4755154459406,88.3714238989118,14.9816989907676,39.7608113809384,22.8623213578292,87.9300213296283,73.9542123428196,52.0190909945241,96.7984476170088,69.6487534903356,105.006425610159,16.6070564487064,269.892697211733,96.4796590205084,198.569787304573,64.8523999953065,432.877433819819,102.435327255982,119.754067430103,127.877245114193,145.183484043815,838.057529119631,71.0625292117468,100.527340624017,78.0478178869646,110.204794201592,23.4257406005102,50.7193259074049,35.7853360414186,92.754519561983,50.7979949149461,50.4769732311848,57.7462069860567,128.685065967458,120.71310491104,19.804355470516,16.436299692364,36.0142082357336,110.941453905521,166.320530018065,112.233874422361,36.0800570960557,46.4551962142689,132.418394073086,47.0396794661287,104.255923536713,292.106864026029,119.530973800044,34.7217555531214,13.0527107991449,304.142618886978,52.2368741907779,116.509025774076,221.28650448341,42.7926585556732,107.108407411579,65.0129983960452,66.9574271200838,110.524972007564,169.937853812739,75.8057471285368,34.7316215268366,169.15555690464,22.8970084956084,28.087015341888,61.4740117807506,48.6338394404038,46.2581820912827,48.8530219757609,70.9884515051059,31.0123862988445,20.6224387684318,63.7221837296084,104.360473615593,150.197935780898,56.0109554531279,35.6939478135476,44.1180840106236,37.7606302678703,56.8076013754485,58.5811891048447,13.5817122683996,1.01444720027578,173.284826151661,203.096866257238,168.106176035292,115.914639228355,187.921222609174,256.265631819802,170.028170818914,111.154728965981,98.7026223700656,74.9625610447444,221.103912823219,267.183048625181,341.423242170894,289.050226865076,448.474972459337,262.959511153114,607.491513175754,429.92908453857,180.243734809665,238.403592214555,307.30160369856,326.215733194581,281.85188919862,80.0055529326307,150.750714575246,157.59876074245,190.539196325263,42.9542221808286,97.7853656669661,25.3164463206255,37.8598895605495,43.294702698557,35.9762955624507,59.0993175568908,80.5971777090137,39.4711289241673,36.3979640648515,71.3781941602385,63.8602425668615,264.953730219937,62.1774615116158,42.8442538210109,54.8885991522371,48.9099375186865,37.6007498086818,24.6983745326325,45.2101591408049,303.529542310843,22.1877729526558,43.3972649005198,43.2101505261271,18.7714327830289,48.8063720067479,31.1139055925611,27.4163835130111,55.3648761429346,7.03419042170084,16.4971961436923,11.3231478136245,11.0301734573934,38.3595517696097,19.7694675694565,70.5194498633722,5.02780426175919,389.555329550438,155.830808122477,10.4074197277111,458.126050854198,117.292017826276,25.3063146880051,34.0071783181404,93.3858075484335,25.4344291658536,15.8805168619682,14.7996520273426,25.997578946728,71.3847101295772,74.9848569347836,98.2687795486677,30.0822901575554,18.5996322502045,319.216813906019,14.4975584472621,94.0873730609979,82.8065715125322,337.855990078396,60.1765788649481,29.8573631708822,21.945436946353,45.0961062961988,22.2198653394518,35.929592536237,95.6959867800482,27.5224616241556,24.0668915968017,11.5134131040008,85.8445338613479,28.3152703418989,72.8245837545693,29.9993028091841,48.4248559995106,37.0249018584345,43.0281541653953,69.8974676881594,129.177300050029,186.750442277349,36.0919282106976,14.9304195987667,65.8339693723703,211.117200791147,89.4036327567355,15.5544434016842,83.2408325041953,125.102744709801,164.752752099808,462.941385562552,45.6735117288834,21.1738239721854,85.2049647948358,30.2513393806488,85.7831160261371,28.5958306544991,25.9492085182804,14.5164528980959,17.2090943528111,73.4841724536811,66.1256020931064,35.564512216038,31.845854727623,149.829684275866,85.0429655689915,28.523135108437,24.243107702965,41.4520944939716,301.701838129559,209.740114407313,67.2692370176156,107.827840459129,11.2290942461811,32.6279271264644,36.2706276871584,14.4570985009869,139.184694199713,17.8136155408675,24.6957305945423,43.0562334192796,36.2144318198373,57.8550039339217,23.0963016159593,80.8790884513574,267.04471389405,76.078030965012,370.101255790065,43.7025218606319,96.6868319603658,270.240885621008,31.2469392559901,22.5852717898043,33.7816153761398,43.820183294791,25.6888398706543,159.393616464414,65.0018836235921,14.4821874106648,15.2722741619132,51.3156035299938,127.222296213029,62.3937098652415,109.887146779442,79.1063483715945,33.1074683049997,58.7881044693068,81.3870861341014,11.2231310211535,36.6660649144031,118.584666085293,45.3914402327254,20.9012021521819,56.383521883197,150.391575983196,56.9334731675619,61.6586877491088,16.7285276475256,105.899462588734,62.5695793199823,82.995894394727,53.9652894518445,37.0118471424834,76.3180261420177,32.4636895530312,117.696139049382,140.382670462418,23.9325609716265,45.4658493439068,154.457825829552,24.1629793666719,192.405572770833,53.9084768846441,272.213543293229,531.939662574225,37.2356518143399,69.2427943374983 | |||
|short_description=p1@P4HA1 | |||
}} |
Revision as of 03:29, 11 January 2014
Short description: | p1@P4HA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_P4HA1_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | -5bp_to_ENST00000307116, ENST00000373008_5end |
EntrezGene: | P4HA1 |
HGNC: | 8546 |
UniProt: | P13674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.31e-11 | 427 |
somatic stem cell | 1.09e-10 | 433 |
stem cell | 2.49e-10 | 441 |
vascular associated smooth muscle cell | 1.90e-09 | 32 |
fibroblast | 1.92e-09 | 76 |
muscle precursor cell | 2.73e-08 | 58 |
myoblast | 2.73e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-08 | 58 |
smooth muscle cell | 3.34e-08 | 43 |
smooth muscle myoblast | 3.34e-08 | 43 |
muscle cell | 2.02e-07 | 55 |
skin fibroblast | 7.26e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.56e-09 | 62 |
striated muscle tissue | 3.56e-09 | 62 |
myotome | 3.56e-09 | 62 |
dense mesenchyme tissue | 6.63e-09 | 73 |
somite | 7.14e-09 | 71 |
presomitic mesoderm | 7.14e-09 | 71 |
presumptive segmental plate | 7.14e-09 | 71 |
dermomyotome | 7.14e-09 | 71 |
trunk paraxial mesoderm | 7.14e-09 | 71 |
muscle tissue | 1.21e-08 | 64 |
musculature | 1.21e-08 | 64 |
musculature of body | 1.21e-08 | 64 |
paraxial mesoderm | 1.75e-08 | 72 |
presumptive paraxial mesoderm | 1.75e-08 | 72 |
mesoderm | 6.36e-08 | 315 |
mesoderm-derived structure | 6.36e-08 | 315 |
presumptive mesoderm | 6.36e-08 | 315 |
multilaminar epithelium | 7.11e-08 | 83 |
artery | 2.35e-07 | 42 |
arterial blood vessel | 2.35e-07 | 42 |
arterial system | 2.35e-07 | 42 |
musculoskeletal system | 3.08e-07 | 167 |
trunk mesenchyme | 5.07e-07 | 122 |
systemic artery | 5.21e-07 | 33 |
systemic arterial system | 5.21e-07 | 33 |
connective tissue | 5.68e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.87e-07 | 14 |