FFCP PHASE1:Hg19::chr10:71332711..71332719,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C488 | |||
|description=CAGE_peak_at_chr10:71332711..71332719,+ | |||
|id=chr10:71332711..71332719,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.00e-08!182;CL:0002032!6.30e-08!165;CL:0000837!6.30e-08!165;CL:0000037!1.27e-07!172;CL:0000566!1.27e-07!172;CL:0000738!3.24e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000990;1.49e-17;8!CL:0000451;2.46e-14;10!CL:0000840;5.17e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.13e-17,8;CL:0000451,1.96e-14,10;CL:0000763,3.59e-12,108;CL:0000049,3.59e-12,108;CL:0002032,9.54e-11,161;CL:0000837,9.54e-11,161;CL:0000037,3.83e-10,168;CL:0000840,4.71e-10,5;CL:0001029,4.71e-10,5;CL:0000988,1.94e-09,177 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;9.56e-16;31!DOID:1240;7.07e-11;39!DOID:2531;6.89e-08;51!DOID:0060083;6.89e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.25e-16,31;DOID:1240,1.53e-15,39;DOID:2531,6.09e-14,51;DOID:0060083,6.09e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.68e-28!115;UBERON:0001049!3.58e-19!57;UBERON:0005068!3.58e-19!57;UBERON:0006241!3.58e-19!57;UBERON:0007135!3.58e-19!57;UBERON:0002780!1.69e-16!41;UBERON:0001890!1.69e-16!41;UBERON:0006240!1.69e-16!41;UBERON:0002020!5.26e-16!34;UBERON:0003528!5.26e-16!34;UBERON:0003080!6.31e-16!42;UBERON:0001893!7.73e-16!34;UBERON:0002616!1.30e-15!59;UBERON:0002791!5.98e-15!33;UBERON:0001017!8.24e-15!82;UBERON:0005743!1.91e-14!86;UBERON:0001869!6.49e-14!32;UBERON:0000955!6.99e-14!69;UBERON:0006238!6.99e-14!69;UBERON:0003075!1.14e-13!86;UBERON:0007284!1.14e-13!86;UBERON:0002346!1.40e-12!90;UBERON:0000073!4.73e-12!94;UBERON:0001016!4.73e-12!94;UBERON:0002619!5.53e-11!22;UBERON:0003056!1.71e-09!61;UBERON:0000956!3.10e-09!25;UBERON:0000203!3.10e-09!25;UBERON:0002308!3.33e-09!9;UBERON:0000125!3.33e-09!9;UBERON:0001950!1.11e-08!20;UBERON:0002420!2.85e-07!9;UBERON:0007245!2.85e-07!9;UBERON:0010009!2.85e-07!9;UBERON:0010011!2.85e-07!9;UBERON:0000454!2.85e-07!9;UBERON:0009663!5.67e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.95e-14;2!UBERON:0003022;1.95e-14;2!UBERON:0002421;1.95e-14;2!UBERON:0002600;1.95e-14;2!UBERON:0000349;2.02e-12;5!UBERON:0002079;1.26e-07;1!UBERON:0002619;7.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.89e-14,2;UBERON:0003022,1.89e-14,2;UBERON:0002421,1.89e-14,2;UBERON:0002600,1.89e-14,2;UBERON:0000349,1.57e-12,5;UBERON:0002079,1.26e-07,1;UBERON:0002619,7.80e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,1.32208974556972,0,0,0,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,1.0447784237956,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,10.9768654288049,0,0,14.2833653720804,0,0,0,0,0,4.49646610290359,23.0051666197794,2.98092366383228,0,12.5968713366468,15.4336514445767,9.34355193586688,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,1.96937182974718,0,0,0,0,0,0.251932747854276,0,0,0,0,0,42.9720790990572,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.723578631752448,0,0.442317039724898,0,0.438770794307945,0,0,0,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0.889563386041866,0.123563938946503,0.104421949505455,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,4.20619766846903,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,16.6998234859954,2.86027152834309,0,0,0,0,0,0.242998226632099,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.79339561045614,0,0,0,0.157204305099666,0,0.496166021811951,0.395223263795889,4.62811873847405,0,0,0.5013797880454,0,0,0,0,0.366078794705889,0.876336514945499,0,1.55300672151593,0.0620964029413835,0,0,0,0,0,0,2.75349954360568,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,1.94860308839388,0.930053882193542,7.36044274151299,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.192687675289379,0,1.27707087245721,0.205116364240755,0,0.414943514785307,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,1.2401207790071,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0.235479278551542,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0,0,0,1.81155412280008,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0.891139200981258,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0.730336388246517,0,0.716697915757256,0.788857810965923,0.475940431336403,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,1.03432995861895,0,0,0,0.0620747142958579,0,0.12729431655633,0,0.435433495793923,0,0.26940821205835,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:71332711..71332719,+ | |||
}} |
Revision as of 03:17, 11 January 2014
Short description: | p@chr10:71332711..71332719, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:71332711..71332719, + |
Coexpression cluster: | C488_biphenotypic_acute_skeletal_hippocampus_Monocytederived_diaphragm_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.13e-17 | 8 |
dendritic cell | 1.96e-14 | 10 |
myeloid cell | 3.59e-12 | 108 |
common myeloid progenitor | 3.59e-12 | 108 |
hematopoietic oligopotent progenitor cell | 9.54e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.54e-11 | 161 |
hematopoietic stem cell | 3.83e-10 | 168 |
immature conventional dendritic cell | 4.71e-10 | 5 |
common dendritic progenitor | 4.71e-10 | 5 |
hematopoietic cell | 1.94e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.89e-14 | 2 |
lobe parts of cerebral cortex | 1.89e-14 | 2 |
hippocampal formation | 1.89e-14 | 2 |
limbic lobe | 1.89e-14 | 2 |
limbic system | 1.57e-12 | 5 |
left cardiac atrium | 1.26e-07 | 1 |
regional part of cerebral cortex | 7.80e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.25e-16 | 31 |
leukemia | 1.53e-15 | 39 |
hematologic cancer | 6.09e-14 | 51 |
immune system cancer | 6.09e-14 | 51 |