FFCP PHASE1:Hg19::chr10:64578528..64578542,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3239 | |||
|TSSclassifier=strong | |||
|UniProt=B4DL38 | |||
|association_with_transcript=-109bp_to_ENST00000432380,uc010qio.1_5end | |||
|description=CAGE_peak_5_at_EGR2_5end | |||
|id=chr10:64578528..64578542,- | |||
|ontology_enrichment_celltype=CL:0002194!2.09e-18!63;CL:0000576!2.09e-18!63;CL:0000040!2.09e-18!63;CL:0000559!2.09e-18!63;CL:0002057!1.40e-17!42;CL:0002009!1.66e-17!65;CL:0000839!8.28e-17!70;CL:0000766!1.13e-16!76;CL:0000557!2.04e-16!71;CL:0000860!7.82e-16!45;CL:0002087!3.42e-14!119;CL:0002031!5.34e-14!124;CL:0000738!6.65e-13!140;CL:0002032!2.00e-09!165;CL:0000837!2.00e-09!165;CL:0000763!3.48e-09!112;CL:0000049!3.48e-09!112;CL:0000988!3.64e-09!182;CL:0000037!1.69e-08!172;CL:0000566!1.69e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.22e-17;39!CL:0000234;7.22e-17;39!CL:0000860;1.19e-12;33!CL:0002057;1.19e-12;33!CL:0000840;2.39e-11;5!CL:0000235;3.65e-11;6!CL:0002591;6.75e-09;1!CL:0000990;1.00e-07;8!CL:0000766;1.47e-07;69!CL:0000576;2.98e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.12e-21,66;CL:0000557,9.27e-21,67;CL:0002194,1.18e-20,59;CL:0000576,1.18e-20,59;CL:0000040,1.18e-20,59;CL:0000559,1.18e-20,59;CL:0002009,6.63e-20,61;CL:0000766,3.84e-19,72;CL:0000473,4.68e-16,48;CL:0000234,4.68e-16,48;CL:0000763,7.06e-12,108;CL:0000049,7.06e-12,108;CL:0000840,2.23e-11,5;CL:0001029,2.23e-11,5;CL:0000235,4.20e-11,6;CL:0002031,2.04e-10,120;CL:0000860,7.13e-10,42;CL:0002057,7.13e-10,42;CL:0000988,1.20e-09,177;CL:0002087,2.04e-09,115;CL:0002591,7.01e-09,1;CL:0000738,7.17e-09,136;CL:0000990,9.58e-08,8;CL:0002032,4.53e-07,161;CL:0000837,4.53e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.08e-18!102;UBERON:0003061!9.08e-18!102;UBERON:0002193!9.22e-16!112;UBERON:0002371!2.02e-15!80;UBERON:0001474!1.48e-13!86;UBERON:0002405!1.54e-10!115;UBERON:0004765!6.06e-10!101;UBERON:0001434!6.06e-10!101;UBERON:0003081!2.21e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.18e-08;1!UBERON:0007029;2.84e-08;1!UBERON:0002331;2.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-22,98;UBERON:0003061,1.33e-22,98;UBERON:0002371,1.23e-20,76;UBERON:0002193,3.39e-20,108;UBERON:0001474,6.34e-19,82;UBERON:0004765,5.43e-17,90;UBERON:0002405,2.37e-16,93;UBERON:0001434,5.25e-15,100;UBERON:0003081,1.38e-14,203;UBERON:0002204,8.92e-12,167;UBERON:0001301,7.56e-09,1;UBERON:0007029,3.06e-08,1;UBERON:0000926,6.81e-08,315;UBERON:0004120,6.81e-08,315;UBERON:0006603,6.81e-08,315;UBERON:0002331,2.69e-07,10;UBERON:0000358,2.69e-07,10;UBERON:0000307,2.69e-07,10;UBERON:0000091,2.69e-07,10;UBERON:0000087,2.69e-07,10;UBERON:0007010,2.69e-07,10;UBERON:0007806,2.69e-07,10;UBERON:0008780,2.69e-07,10;UBERON:0005728,2.69e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0.755751887377619,0.727752183563449,0.232429036905685,2.05583944010913,2.47765096716083,1.43846196161075,2.56160706529101,2.36482229888585,0,0.645484683583826,0,0.564727018627814,0.818718450173537,0.674170453335254,0.612167784741805,0.320929027076094,0,0,0.797854630486527,0.426224750532694,0,0,0,4.01997864410789,2.60741459210101,1.52032191293582,0.605399502633369,0.368277635987565,0,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,2.27183175558278,1.74129737299267,2.79211717089617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0.490385709340376,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.738651018262192,1.8720341211139,1.18904929830983,0,0,0,0,0,0,2.46331618947972,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54562598340749,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,3.39024349860728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0.409074730008619,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70954934569617,2.59484271787656,3.75919018219639,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,2.79562669187248,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0.837847203816763,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,1.7127920012698,0,0,0,0,0,0.554805861502613,0.189403005275089,0,1.77962244319307,0,0.453692771289717,0.15543720058278,0.443565449968902,0.318593534327405,0,0.155262956876259,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0.464033759878494,0,0,0,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0.327130788511688,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,1.98297222814403,0.558644917973244,0,0,0,0,0,0.256916900385838,0,0,0.41023272848151,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.476128862927481,0.193766729508018,0.124149428591716,0,0,0.404234377916439,0,0,0.202056159043763,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p5@EGR2 | |||
}} |
Revision as of 03:06, 11 January 2014
Short description: | p5@EGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EGR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_ENST00000432380, uc010qio.1_5end |
EntrezGene: | EGR2 |
HGNC: | 3239 |
UniProt: | B4DL38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.12e-21 | 66 |
granulocyte monocyte progenitor cell | 9.27e-21 | 67 |
monopoietic cell | 1.18e-20 | 59 |
monocyte | 1.18e-20 | 59 |
monoblast | 1.18e-20 | 59 |
promonocyte | 1.18e-20 | 59 |
macrophage dendritic cell progenitor | 6.63e-20 | 61 |
myeloid leukocyte | 3.84e-19 | 72 |
defensive cell | 4.68e-16 | 48 |
phagocyte | 4.68e-16 | 48 |
myeloid cell | 7.06e-12 | 108 |
common myeloid progenitor | 7.06e-12 | 108 |
immature conventional dendritic cell | 2.23e-11 | 5 |
common dendritic progenitor | 2.23e-11 | 5 |
macrophage | 4.20e-11 | 6 |
hematopoietic lineage restricted progenitor cell | 2.04e-10 | 120 |
classical monocyte | 7.13e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.13e-10 | 42 |
hematopoietic cell | 1.20e-09 | 177 |
nongranular leukocyte | 2.04e-09 | 115 |
smooth muscle cell of the pulmonary artery | 7.01e-09 | 1 |
leukocyte | 7.17e-09 | 136 |
conventional dendritic cell | 9.58e-08 | 8 |
hematopoietic oligopotent progenitor cell | 4.53e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-22 | 98 |
blood island | 1.33e-22 | 98 |
bone marrow | 1.23e-20 | 76 |
hemolymphoid system | 3.39e-20 | 108 |
bone element | 6.34e-19 | 82 |
skeletal element | 5.43e-17 | 90 |
immune system | 2.37e-16 | 93 |
skeletal system | 5.25e-15 | 100 |
lateral plate mesoderm | 1.38e-14 | 203 |
musculoskeletal system | 8.92e-12 | 167 |
epididymis | 7.56e-09 | 1 |
surface | 3.06e-08 | 1 |
mesoderm | 6.81e-08 | 315 |
mesoderm-derived structure | 6.81e-08 | 315 |
presumptive mesoderm | 6.81e-08 | 315 |
umbilical cord | 2.69e-07 | 10 |
blastocyst | 2.69e-07 | 10 |
blastula | 2.69e-07 | 10 |
bilaminar disc | 2.69e-07 | 10 |
inner cell mass | 2.69e-07 | 10 |
cleaving embryo | 2.69e-07 | 10 |
connecting stalk | 2.69e-07 | 10 |
inner cell mass derived epiblast | 2.69e-07 | 10 |
extraembryonic mesoderm | 2.69e-07 | 10 |