FFCP PHASE1:Hg19::chr10:20105157..20105184,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21013 | |||
|TSSclassifier=strong | |||
|UniProt=B7WP84,Q6UX71 | |||
|association_with_transcript=0bp_to_ENST00000377238,ENST00000377242,ENST00000377252_5end | |||
|description=CAGE_peak_5_at_PLXDC2_5end | |||
|id=chr10:20105157..20105184,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-12!42;CL:0000860!7.36e-11!45;CL:0000766!3.09e-10!76;CL:0002009!6.48e-10!65;CL:0002194!1.29e-09!63;CL:0000576!1.29e-09!63;CL:0000040!1.29e-09!63;CL:0000559!1.29e-09!63;CL:0000557!3.08e-09!71;CL:0000839!1.39e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-08;33!CL:0002057;1.57e-08;33!CL:0000473;2.88e-07;39!CL:0000234;2.88e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.21e-08,48;CL:0000234,5.21e-08,48;CL:0000860,5.84e-08,42;CL:0002057,5.84e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-24!115;UBERON:0001049!5.54e-17!57;UBERON:0005068!5.54e-17!57;UBERON:0006241!5.54e-17!57;UBERON:0007135!5.54e-17!57;UBERON:0003080!2.56e-15!42;UBERON:0002616!9.31e-15!59;UBERON:0002780!1.12e-14!41;UBERON:0001890!1.12e-14!41;UBERON:0006240!1.12e-14!41;UBERON:0002020!2.59e-14!34;UBERON:0003528!2.59e-14!34;UBERON:0002346!6.26e-14!90;UBERON:0002791!1.18e-13!33;UBERON:0001893!1.34e-13!34;UBERON:0000955!1.46e-13!69;UBERON:0006238!1.46e-13!69;UBERON:0001017!5.79e-13!82;UBERON:0001869!8.40e-13!32;UBERON:0003075!2.16e-12!86;UBERON:0007284!2.16e-12!86;UBERON:0005743!2.25e-12!86;UBERON:0002619!1.81e-11!22;UBERON:0000073!3.61e-11!94;UBERON:0001016!3.61e-11!94;UBERON:0000956!2.48e-10!25;UBERON:0000203!2.48e-10!25;UBERON:0001950!3.30e-10!20;UBERON:0003056!1.81e-09!61;UBERON:0000153!5.09e-08!129;UBERON:0007811!5.09e-08!129;UBERON:0000033!7.53e-08!123;UBERON:0002371!7.68e-08!80;UBERON:0002390!9.94e-08!102;UBERON:0003061!9.94e-08!102;UBERON:0000922!2.31e-07!612;UBERON:0000468!2.47e-07!659;UBERON:0001474!5.15e-07!86;UBERON:0000062!8.22e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;6.38e-12;32!UBERON:0003528;1.69e-11;34!UBERON:0002020;1.69e-11;34!UBERON:0001869;1.96e-10;32!UBERON:0002619;9.02e-10;22!UBERON:0001893;2.17e-09;34!UBERON:0002780;5.34e-09;41!UBERON:0001890;5.34e-09;41!UBERON:0002420;1.27e-08;9!UBERON:0000125;1.27e-08;9!UBERON:0007245;1.27e-08;9!UBERON:0002308;1.27e-08;9!UBERON:0010009;1.27e-08;9!UBERON:0010011;1.27e-08;9!UBERON:0000454;1.27e-08;9!UBERON:0000956;3.35e-08;25!UBERON:0000203;3.35e-08;25!UBERON:0001950;6.27e-08;20!UBERON:0009663;8.84e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.61e-14,34;UBERON:0002020,2.61e-14,34;UBERON:0001049,4.78e-13,56;UBERON:0005068,4.78e-13,56;UBERON:0006241,4.78e-13,56;UBERON:0007135,4.78e-13,56;UBERON:0002791,8.01e-13,32;UBERON:0001893,9.46e-12,34;UBERON:0001869,2.31e-11,32;UBERON:0002780,4.94e-11,41;UBERON:0001890,4.94e-11,41;UBERON:0003080,4.94e-11,41;UBERON:0006240,4.94e-11,41;UBERON:0000073,8.75e-11,53;UBERON:0002616,8.75e-11,53;UBERON:0002619,3.60e-10,22;UBERON:0001017,1.67e-09,81;UBERON:0000955,2.64e-09,68;UBERON:0006238,2.64e-09,68;UBERON:0000956,1.53e-08,25;UBERON:0000203,1.53e-08,25;UBERON:0002420,1.95e-08,9;UBERON:0007245,1.95e-08,9;UBERON:0010009,1.95e-08,9;UBERON:0010011,1.95e-08,9;UBERON:0000454,1.95e-08,9;UBERON:0001016,2.37e-08,89;UBERON:0001950,3.34e-08,20;UBERON:0000125,5.82e-08,9;UBERON:0002308,5.82e-08,9;UBERON:0002346,2.47e-07,86;UBERON:0007023,3.22e-07,114 | |||
|phase1_expression=2.18014055124668,1.71280419112787,3.80576891059122,1.0007329835313,4.91657203870017,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,0.786728553697808,0,2.47705797305722,0,0,0,0,0,0.293600439334847,0,1.20326668482085,1.08505435357926,0.223915474239924,0.647787332037959,0.257575567634187,1.74477886535478,1.88937971844405,2.66842467306598,1.62700325833979,2.46700732813095,1.23882548358041,1.43846196161075,0.768482119587302,0.945928919554341,0.344745680736619,0.645484683583826,2.70852973188684,1.12945403725563,0.545812300115692,0.898893937780338,0.918251677112708,0.320929027076094,1.27867425159808,0.329851300186716,1.79517291859469,2.98357325372886,1.16083695451434,0,2.4912889959823,0.75374599577023,2.08593167368081,0.868755378820466,3.63239701580021,0,1.26584954976354,0.422510572623884,0.212604299965044,0.628975936525128,0.44931452458598,1.20141514273205,0.32145117339416,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,4.3372698286148,1.00267582127178,0.289693037921647,1.5905718941022,4.86634870302636,0.0945348171640679,0,0.702678285545008,0.327447688744282,0,0,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0.98667019366864,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0.292311015483596,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0.265059536642971,0.348581828608555,0.518305275076852,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.658501712451753,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.70445216541493,0,0,0,0.790204397959275,0.858486162094873,0,0.468008530278475,1.0404181360211,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,1.03417372606222,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,2.1100756394171,0.871533458600294,4.79870357673874,0,0,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.716243852959582,0,0,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0.24538298343828,0,0.542530047399471,0,0.892144943985809,1.89242898040722,0.702848489956279,3.61135319673263,2.27407504055985,2.0694614258501,0,0.553107505625109,0,0,0,0.413536052245775,1.2942852049117,0.106727557803444,0,0,0.604780586659361,0.496215615637554,1.53461973288062,0.561320188866147,2.05022638809122,0.511707249066704,3.05622450172854,0,0,0,0,0,0,0,0.802025881213139,0.184161977871793,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.618246069886334,0.54941678891006,0.41254749960294,0,0,0,0,0,0.307007349452259,0,0,0.290033387828457,0.0852266274161009,0.445160178233687,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,1.23213432070436,0,0,0,0.429374660225974,0,0.316379424718726,4.00323407240032,0,0,0,0,0.539617372749944,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.753150406214233,0,0,0,0,1.01489521846434,1.52927441428475,0,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,1.18504244461122,0.321176150207399,0,0,0,0,0.671028323677248,0,0,0,0,0.540911356951966,0,0,0,0.879049075631364,0.242721043499027,0,0,0,1.78178808499583,0,1.9882952955326,1.54736358051564,0,0,0,2.98871982376605,0,0,0,0,0,0,0,0,0.493217028184668,0,5.55684950723184,0,0.463840490809256,0,1.04171104434093,0,2.89999830173917,0.1137934482855,0.254253650292766,1.65471377237555,0,1.45802306691627,0.347249989866585,4.42870692906919,1.08536794762867,0,0.331737779793674,1.18219047581419,0.438770794307945,0,3.06732237412927,0.692552326534174,2.27884111694002,2.07507513949254,0,0.108647371922008,1.27600463892768,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,4.888241159469,0,0,0,0.606610196826093,4.01288823649394,1.40558667435203,0,0,0,1.18375320854817,2.41981432097328,1.22429104652196,1.01098527405581,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.872901148395775,0,1.35588444468319,0,0,0.696418755514666,0,0,0.85381197895741,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,1.41416420770077,2.17446729717782,2.196659772559,0,0.288950589901519,1.20084057741958,1.09524303113594,0,2.14882720709979,0,0.558564802544508,0.687481272035051,0.717873024576814,0.399358000997982,0,0.89268582976749,0.403100834920358,1.44119953416961,0,0,0,0,0.295282444544246,0,3.18091875923721,1.77064427945048,0.160753148465019,0.687697182986169,0,0.2249738915515,0.77380195455795,0.850493793212345,3.68978156359193,0.86686278029118,0.472091293214983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.29282956361551,1.05786081394152,0,0,0.533937062838473,1.10043013569766,2.07119527673598,0.496166021811951,0,0,1.27668251554036,0,0,0.612691153526923,0,0,1.77213635993397,0.976210119215705,1.1267183763585,2.29363678276028,0.887432412294818,0.683060432355218,0.138348634936231,0.624902039810533,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0.449803112163605,0.310525913752519,0.414706207840855,1.59505028734797,0,1.35231848097497,3.04644169735036,0,0.181848659202559,0.429642228169954,1.39210127963548,1.59238355479446,0,0,0.336749488765919,0,0,1.07220795687463,0,0.906823702049089,0.231522474323834,0.244736704506468,0.537266523244462,1.23520578864389,4.16639694199544,0,1.3503982678964,0.337884881306145,1.79369063011563,0,0,1.65910123382077,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,19.2843950610222,0.255788742607303,0,0.471797825567689,0,2.20652288940233,4.67664824223702,0.619678821295011,1.11728983594649,0.318004350653419,0.0788617450012534,0,0,1.8374728641192,0.449604575675217,1.41696576325585,1.27707087245721,2.2562800066483,1.76450187355203,0.553258019713743,2.26065903884592,0,0,0.353909170043221,0,0,0.762764190934334,0,0,0.526472298444801,0,0.781514011233092,0.261906694481422,0,0,0.270150338473579,0.781078098613847,1.03343398250592,0.570742291745161,4.37579847214576,0.548257766857182,0,0.703484977438482,0.255524855279191,0,0.336283722218824,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.857440047187092,0.611727596791485,0.394636641377094,0,0,0.39246546425257,1.25692471932802,0.560544326627578,0.913158720509496,0,0,0.500335809236594,0,1.85986280589,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,1.69354820076372,0.4582137370881,0.31020638566432,0,0.111855431797792,0,0,0.647428837187895,0.513314034281235,5.799072156691,2.91426595835484,0.467878926924211,0,0,0.45178432815584,0,0.301925687133347,0.385870790539723,1.09279780251979,0.940634592723046,3.18692818280077,0.471353094203252,1.17785080268967,2.0793248022896,2.9585900930838,0,0.187967835959707,0.773494655682926,0,0,0,0,1.46067277649303,0.458729283404541,2.00675416412032,0,0.407948941145488,3.05445483238264,0,1.11598505450025,1.38652688589425,0,0,0.218531143927391,0,0.203977659483963,0.26721740526556,0.459474497674225,0,0.530450887527676,1.07185652062471,1.65833887891756,0.724030971033267,0.852935927603924,4.04709533488359,0.0645889098360061,0.186224142887574,1.12131862580613,0.318235791390825,3.84022659020617,1.52401723527873,1.36893320434112,0.471464371102113,0.286888821570705,3.32660356546013,0.325613074443898,0,0,0,4.69281884806909,1.71138021856013,2.84827324821017,2.66302709674205,0.805095174364105,0 | |||
|short_description=p5@PLXDC2 | |||
}} |
Revision as of 02:03, 11 January 2014
Short description: | p5@PLXDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLXDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377238, ENST00000377242, ENST00000377252_5end |
EntrezGene: | PLXDC2 |
HGNC: | 21013 |
UniProt: | B7WP84Q6UX71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.21e-08 | 48 |
phagocyte | 5.21e-08 | 48 |
classical monocyte | 5.84e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.84e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.61e-14 | 34 |
gray matter | 2.61e-14 | 34 |
neural tube | 4.78e-13 | 56 |
neural rod | 4.78e-13 | 56 |
future spinal cord | 4.78e-13 | 56 |
neural keel | 4.78e-13 | 56 |
regional part of telencephalon | 8.01e-13 | 32 |
telencephalon | 9.46e-12 | 34 |
cerebral hemisphere | 2.31e-11 | 32 |
regional part of forebrain | 4.94e-11 | 41 |
forebrain | 4.94e-11 | 41 |
anterior neural tube | 4.94e-11 | 41 |
future forebrain | 4.94e-11 | 41 |
regional part of nervous system | 8.75e-11 | 53 |
regional part of brain | 8.75e-11 | 53 |
regional part of cerebral cortex | 3.60e-10 | 22 |
central nervous system | 1.67e-09 | 81 |
brain | 2.64e-09 | 68 |
future brain | 2.64e-09 | 68 |
cerebral cortex | 1.53e-08 | 25 |
pallium | 1.53e-08 | 25 |
basal ganglion | 1.95e-08 | 9 |
nuclear complex of neuraxis | 1.95e-08 | 9 |
aggregate regional part of brain | 1.95e-08 | 9 |
collection of basal ganglia | 1.95e-08 | 9 |
cerebral subcortex | 1.95e-08 | 9 |
nervous system | 2.37e-08 | 89 |
neocortex | 3.34e-08 | 20 |
neural nucleus | 5.82e-08 | 9 |
nucleus of brain | 5.82e-08 | 9 |
neurectoderm | 2.47e-07 | 86 |
adult organism | 3.22e-07 | 114 |