FFCP PHASE1:Hg19::chr10:8097591..8097627,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=2625 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4172 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB463676,AM392571,AM392688,CU678358_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_7_at_GATA3_5end | |||
|id=chr10:8097591..8097627,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.16e-24!25;CL:0000827!4.16e-24!25;CL:0000791!3.22e-21!18;CL:0000789!3.22e-21!18;CL:0002420!3.22e-21!18;CL:0002419!3.22e-21!18;CL:0000790!3.22e-21!18;CL:0000838!2.86e-20!52;CL:0000542!1.24e-19!53;CL:0000051!1.24e-19!53;CL:0000625!3.92e-14!11;CL:0000738!1.35e-08!140;CL:0000624!7.19e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.17e-45;18!CL:0000789;5.17e-45;18!CL:0002419;5.17e-45;18!CL:0000625;4.11e-36;11!CL:0000084;3.31e-35;25!CL:0000624;8.04e-14;6!CL:0000542;1.80e-11;53!CL:0000623;7.36e-11;3!CL:0000815;8.27e-08;2!CL:0000792;8.27e-08;2!CL:0002677;8.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.09e-45,18;CL:0000789,1.09e-45,18;CL:0002420,1.09e-45,18;CL:0002419,1.09e-45,18;CL:0000790,1.09e-45,18;CL:0000625,1.10e-36,11;CL:0000084,1.47e-35,25;CL:0000827,1.47e-35,25;CL:0000838,2.59e-23,52;CL:0000542,9.11e-23,53;CL:0000051,9.11e-23,53;CL:0000624,5.56e-14,6;CL:0000623,9.98e-11,3;CL:0000825,9.98e-11,3;CL:0002087,1.61e-10,115;CL:0000738,6.39e-09,136;CL:0002031,6.71e-08,120;CL:0000815,7.77e-08,2;CL:0000792,7.77e-08,2;CL:0002677,7.77e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;5.17e-45;18!CL:0000051;1.80e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.03e-09!15;UBERON:0000179!8.03e-09!15;UBERON:0000463!8.03e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.56e-09;15!UBERON:0000179;1.56e-09;15!UBERON:0000463;1.56e-09;15!UBERON:0002370;1.25e-07;2!UBERON:0005058;1.25e-07;2!UBERON:0009113;1.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.66e-09,15;UBERON:0000179,1.66e-09,15;UBERON:0000463,1.66e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.840547463227464,0.821005894499457,0.944529375764151,0.393364276848904,1.91914699048606,0.619264493264304,0,0,0,0,0,0.587200878669695,1.66198622559563,0.601633342410425,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,1.96709770113833,2.35806457649499,2.05601498999509,1.67186495390678,2.60737813306872,4.2610302516126,1.94826728407911,0.668462741311041,2.3568472597987,1.99380505125259,3.24964636518019,2.68991771423918,2.34106825607781,0.493313713811028,1.38175008892924,1.73881851441031,4.00373720537563,3.21048993707656,4.18142095219907,1.13309342697566,0.766440987203842,2.06176467289578,0.759059076058509,3.50421955756506,1.95325036156926,5.70271226669025,3.312652619711,4.35154477925022,4.99722906209383,3.55165878066025,3.28451198768419,1.81446068902259,2.13952156626806,2.75166367377318,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,1.62028389576352,0.714397826272638,1.12264686313085,1.0135033243499,0,1.89853131913626,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0.171567810298526,0,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0.268675568108545,0,0,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,1.18218456121156,3.01878604803324,3.33691894327346,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,0.647142602455851,1.60091336705167,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.262248829918848,1.35359883872224,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0,0.569647187174163,1.42939065274673,1.23408681925858,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0.245040215981032,0,0.28853842595289,0.640276590135727,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0.557216921387392,0,0.47748896947538,0.296964680832639,0,0,0,0.445234820091624,0.824019371133798,0,0,0.828851746593443,0,0,0.492339221844278,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,2.86470537193757,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.628303510868405,0.760531603454056,1.27600463892768,0.183195186803725,1.06606955203727,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0.992332043623902,0,1.09613338542806,1.27668251554036,0,0.7520696820681,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,1.15761237161917,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0.622077260032973,0,0.323474434190045,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0.49131575253029,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0.576169937778896,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.375935671919414,0.709036767709349,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.506794004045748,0.203977659483963,0,0.36757959813938,0,0,0,0,0,0,0.23806443146374,3.22944549180031,1.80016671457988,0.224263725161227,0.445530107947154,0,0.435433495793923,0.342233301085281,1.0776328482334,0.215166616178029,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,1.20764276154616,0.641136984606466 | |||
|short_description=p7@GATA3 | |||
}} |
Revision as of 01:39, 11 January 2014
Short description: | p7@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GATA3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_AB463676, AM392571, AM392688, CU678358_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.09e-45 | 18 |
alpha-beta T cell | 1.09e-45 | 18 |
immature T cell | 1.09e-45 | 18 |
mature T cell | 1.09e-45 | 18 |
immature alpha-beta T cell | 1.09e-45 | 18 |
CD8-positive, alpha-beta T cell | 1.10e-36 | 11 |
T cell | 1.47e-35 | 25 |
pro-T cell | 1.47e-35 | 25 |
lymphoid lineage restricted progenitor cell | 2.59e-23 | 52 |
lymphocyte | 9.11e-23 | 53 |
common lymphoid progenitor | 9.11e-23 | 53 |
CD4-positive, alpha-beta T cell | 5.56e-14 | 6 |
natural killer cell | 9.98e-11 | 3 |
pro-NK cell | 9.98e-11 | 3 |
nongranular leukocyte | 1.61e-10 | 115 |
leukocyte | 6.39e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 6.71e-08 | 120 |
regulatory T cell | 7.77e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.77e-08 | 2 |
naive regulatory T cell | 7.77e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.66e-09 | 15 |
haemolymphatic fluid | 1.66e-09 | 15 |
organism substance | 1.66e-09 | 15 |