FFCP PHASE1:Hg19::chr1:236021384..236021389,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr1:236021384..236021389,+ | |||
|id=chr1:236021384..236021389,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.00e-48!42;CL:0000860!9.71e-45!45;CL:0000766!1.66e-44!76;CL:0000839!2.57e-39!70;CL:0000557!9.97e-39!71;CL:0002194!1.08e-34!63;CL:0000576!1.08e-34!63;CL:0000040!1.08e-34!63;CL:0000559!1.08e-34!63;CL:0002009!1.48e-33!65;CL:0000763!2.77e-29!112;CL:0000049!2.77e-29!112;CL:0000738!8.38e-23!140;CL:0002031!5.70e-21!124;CL:0002032!7.42e-19!165;CL:0000837!7.42e-19!165;CL:0000037!5.92e-18!172;CL:0000566!5.92e-18!172;CL:0002087!3.85e-17!119;CL:0000988!8.75e-17!182;CL:0000134!8.21e-10!358;CL:0002320!1.49e-09!365;CL:0000219!1.24e-08!390;CL:0002274!7.98e-08!5;CL:0000457!7.98e-08!5;CL:0002191!7.98e-08!5;CL:0000097!7.98e-08!5;CL:0000831!7.98e-08!5;CL:0002028!7.98e-08!5;CL:0000048!1.56e-07!430;CL:0000723!2.24e-07!436;CL:0000034!3.58e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-22;33!CL:0002057;1.65e-22;33!CL:0000097;1.48e-18;5!CL:0000473;4.16e-14;39!CL:0000234;4.16e-14;39!CL:0000771;3.24e-12;2!CL:0000766;5.15e-11;69!CL:0000576;7.33e-11;48!CL:0000163;9.23e-11;9!CL:0000763;1.09e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.60e-24,72;CL:0000839,7.42e-21,66;CL:0000557,1.51e-20,67;CL:0000860,6.21e-19,42;CL:0002057,6.21e-19,42;CL:0000097,1.48e-18,5;CL:0002028,1.48e-18,5;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002194,2.84e-13,59;CL:0000576,2.84e-13,59;CL:0000040,2.84e-13,59;CL:0000559,2.84e-13,59;CL:0002009,7.59e-13,61;CL:0000738,8.37e-13,136;CL:0000771,3.24e-12,2;CL:0002031,1.78e-11,120;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000163,9.23e-11,9;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002087,7.74e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.43e-34!80;UBERON:0001474!1.63e-31!86;UBERON:0004765!1.91e-29!101;UBERON:0001434!1.91e-29!101;UBERON:0002390!3.94e-26!102;UBERON:0003061!3.94e-26!102;UBERON:0002193!1.55e-23!112;UBERON:0002405!7.59e-23!115;UBERON:0002204!1.40e-16!167;UBERON:0003081!1.09e-10!216;UBERON:0002384!3.38e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.90e-18,76;UBERON:0001474,8.16e-17,82;UBERON:0004765,2.53e-15,90;UBERON:0002405,7.88e-15,93;UBERON:0002390,4.51e-14,98;UBERON:0003061,4.51e-14,98;UBERON:0001434,8.64e-14,100;UBERON:0002193,9.19e-13,108;UBERON:0002204,3.47e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0,0,0.822335776043652,0.309706370895104,0,1.0246428261164,0,0,11.6187243045089,0,0,1.36453075028923,0,0.306083892370903,12.8371610830437,0.639337125799041,0,0.199463657621632,0,0,5.10646702222026,0.622822248995575,0,0.521482918420201,0,0,8.10210799172642,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,0,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:236021384..236021389,+ | |||
}} |
Revision as of 00:53, 11 January 2014
Short description: | p@chr1:236021384..236021389, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:236021384..236021389, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.60e-24 | 72 |
myeloid lineage restricted progenitor cell | 7.42e-21 | 66 |
granulocyte monocyte progenitor cell | 1.51e-20 | 67 |
classical monocyte | 6.21e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-19 | 42 |
mast cell | 1.48e-18 | 5 |
basophil mast progenitor cell | 1.48e-18 | 5 |
defensive cell | 1.41e-16 | 48 |
phagocyte | 1.41e-16 | 48 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
monopoietic cell | 2.84e-13 | 59 |
monocyte | 2.84e-13 | 59 |
monoblast | 2.84e-13 | 59 |
promonocyte | 2.84e-13 | 59 |
macrophage dendritic cell progenitor | 7.59e-13 | 61 |
leukocyte | 8.37e-13 | 136 |
eosinophil | 3.24e-12 | 2 |
hematopoietic lineage restricted progenitor cell | 1.78e-11 | 120 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
endocrine cell | 9.23e-11 | 9 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
nongranular leukocyte | 7.74e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.90e-18 | 76 |
bone element | 8.16e-17 | 82 |
skeletal element | 2.53e-15 | 90 |
immune system | 7.88e-15 | 93 |
hematopoietic system | 4.51e-14 | 98 |
blood island | 4.51e-14 | 98 |
skeletal system | 8.64e-14 | 100 |
hemolymphoid system | 9.19e-13 | 108 |
musculoskeletal system | 3.47e-08 | 167 |