FFCP PHASE1:Hg19::chr1:228297188..228297205,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1721 | |||
|description=CAGE_peak_at_chr1:228297188..228297205,+ | |||
|id=chr1:228297188..228297205,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.86e-21!42;CL:0000860!4.77e-20!45;CL:0000839!4.71e-17!70;CL:0000766!1.28e-16!76;CL:0000738!3.40e-16!140;CL:0000557!9.94e-16!71;CL:0002031!2.05e-15!124;CL:0002087!3.49e-13!119;CL:0002194!3.72e-13!63;CL:0000576!3.72e-13!63;CL:0000040!3.72e-13!63;CL:0000559!3.72e-13!63;CL:0000037!4.91e-13!172;CL:0000566!4.91e-13!172;CL:0002009!5.44e-13!65;CL:0002032!7.22e-13!165;CL:0000837!7.22e-13!165;CL:0000763!1.67e-12!112;CL:0000049!1.67e-12!112;CL:0000988!9.04e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-20;33!CL:0002057;3.48e-20;33!CL:0000473;6.50e-15;39!CL:0000234;6.50e-15;39!CL:0000576;4.45e-13;48!CL:0000766;1.22e-10;69!CL:0000771;1.41e-09;2!CL:0000097;5.69e-09;5!CL:0002393;2.29e-07;6!CL:0002397;2.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.00e-26,42;CL:0002057,9.00e-26,42;CL:0000766,1.30e-23,72;CL:0000473,4.90e-22,48;CL:0000234,4.90e-22,48;CL:0000839,2.90e-21,66;CL:0000557,7.03e-21,67;CL:0000738,6.45e-18,136;CL:0002194,8.14e-17,59;CL:0000576,8.14e-17,59;CL:0000040,8.14e-17,59;CL:0000559,8.14e-17,59;CL:0002009,3.83e-16,61;CL:0000763,1.46e-15,108;CL:0000049,1.46e-15,108;CL:0002031,9.26e-15,120;CL:0000037,1.69e-14,168;CL:0002087,7.70e-14,115;CL:0000988,2.01e-13,177;CL:0002032,5.86e-13,161;CL:0000837,5.86e-13,161;CL:0000771,1.17e-09,2;CL:0000097,5.79e-09,5;CL:0002028,5.79e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.11e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-16!102;UBERON:0003061!1.31e-16!102;UBERON:0007023!4.79e-16!115;UBERON:0002193!4.08e-15!112;UBERON:0002371!1.55e-12!80;UBERON:0001474!1.22e-11!86;UBERON:0002405!1.79e-11!115;UBERON:0001049!1.28e-10!57;UBERON:0005068!1.28e-10!57;UBERON:0006241!1.28e-10!57;UBERON:0007135!1.28e-10!57;UBERON:0004765!1.65e-08!101;UBERON:0001434!1.65e-08!101;UBERON:0002616!2.72e-08!59;UBERON:0002780!6.60e-08!41;UBERON:0001890!6.60e-08!41;UBERON:0006240!6.60e-08!41;UBERON:0003080!1.64e-07!42;UBERON:0002346!3.40e-07!90;UBERON:0000955!4.42e-07!69;UBERON:0006238!4.42e-07!69;UBERON:0001017!4.85e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.41e-09;2!UBERON:0002757;1.41e-09;2!UBERON:0010134;1.41e-09;2!UBERON:0005408;1.41e-09;2!UBERON:0001899;1.41e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-19,98;UBERON:0003061,2.09e-19,98;UBERON:0002371,7.21e-18,76;UBERON:0002193,4.29e-17,108;UBERON:0001474,3.16e-16,82;UBERON:0002405,2.18e-15,93;UBERON:0004765,2.23e-14,90;UBERON:0001434,1.74e-12,100;UBERON:0001905,2.52e-09,2;UBERON:0002757,2.52e-09,2;UBERON:0010134,2.52e-09,2;UBERON:0005408,2.52e-09,2;UBERON:0001899,2.52e-09,2;UBERON:0003081,4.91e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0,4.9859586767869,4.01088894940283,3.47217393145363,0.223915474239924,0,0.257575567634187,0.581592955118259,0.377875943688809,0.727752183563449,2.09186133215116,0.822335776043652,1.85823822537062,1.7261543539329,1.0246428261164,0.47296445977717,1.72372840368309,2.5819387343353,6.77132432971709,0.752969358170419,0.818718450173537,0,3.06083892370903,0.641858054152187,2.55734850319616,0.329851300186716,0.199463657621632,0.852449501065388,0.870627715885752,1.70215567407342,2.4912889959823,2.26123798731069,1.0429658368404,0.65156653411535,0.605399502633369,2.20966581592539,0.632924774881769,0,0,0.209658645508376,0,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0.590129310341499,0,0.616804496998528,0,0.32592226663359,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,1.06976078313403,1.01377082717959,2.43806866313962,0,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0.515281080091258,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,1.07865046528132,0.196221465125346,0,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0.614942192715568,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.985326475791887,0.880484340132261,8.08579650609011,6.3412779503463,11.4880614418006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,1.97030760201927,0.862510299438069,1.66845947163673,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,1.03384013061444,1.2942852049117,0.213455115606889,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.515205058238611,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0.18714054040822,0.439524537815682,0,0.111443384277478,0,0.23874448473769,0,0,0,0.984685914873589,0,0,0,0.996239941255349,0,0,0,0.492339221844278,0,0,0.179021174675609,0.511572370226872,0.591860433821602,2.3948309234694,0,0,0.649376687132959,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,1.08536794762867,4.5774520895125,0.774054819518572,0.295547618953547,0.658156191461918,0.10893846351899,0.139423744278603,0.230850775511391,0.113942055847001,0.46112780877612,0.359030577639089,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0,0.424059214301822,0,0,0.176915129006678,0,0,0.247127877893006,0,0.337005664903385,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0,0,0.195984794828755,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0,0.264768380074501,0,0,0,0.569797163602908,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0.788662062837943,1.11712960508902,0,0,0,0,0,0.0671834724867263,0,5.82479747637269,0.0787831823072236,0,0.13480708770837,0,0,0.795229689809303,0.817220436669454,0,0.137539436597234,0,0.2249738915515,0,0.485996453264197,0,0.0788057072991982,0.262272940674991,0,0.179287339332845,0.767660789277781,0,0,0.25426853765475,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,0.904980694530854,0.13223260174269,0,0,1.17466153824464,0.314408610199332,0.414239055347196,0,0.395223263795889,0,0,0,0.2506898940227,0,0,0.314108192500469,0.886068179966986,0.36607879470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| |||
|short_description=p@chr1:228297188..228297205,+ | |||
}} |
Revision as of 00:33, 11 January 2014
Short description: | p@chr1:228297188..228297205, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:228297188..228297205, + |
Coexpression cluster: | C1721_Mast_CD14_Eosinophils_Natural_Peripheral_Basophils_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.00e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.00e-26 | 42 |
myeloid leukocyte | 1.30e-23 | 72 |
defensive cell | 4.90e-22 | 48 |
phagocyte | 4.90e-22 | 48 |
myeloid lineage restricted progenitor cell | 2.90e-21 | 66 |
granulocyte monocyte progenitor cell | 7.03e-21 | 67 |
leukocyte | 6.45e-18 | 136 |
monopoietic cell | 8.14e-17 | 59 |
monocyte | 8.14e-17 | 59 |
monoblast | 8.14e-17 | 59 |
promonocyte | 8.14e-17 | 59 |
macrophage dendritic cell progenitor | 3.83e-16 | 61 |
myeloid cell | 1.46e-15 | 108 |
common myeloid progenitor | 1.46e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 9.26e-15 | 120 |
hematopoietic stem cell | 1.69e-14 | 168 |
nongranular leukocyte | 7.70e-14 | 115 |
hematopoietic cell | 2.01e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.86e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.86e-13 | 161 |
eosinophil | 1.17e-09 | 2 |
mast cell | 5.79e-09 | 5 |
basophil mast progenitor cell | 5.79e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-19 | 98 |
blood island | 2.09e-19 | 98 |
bone marrow | 7.21e-18 | 76 |
hemolymphoid system | 4.29e-17 | 108 |
bone element | 3.16e-16 | 82 |
immune system | 2.18e-15 | 93 |
skeletal element | 2.23e-14 | 90 |
skeletal system | 1.74e-12 | 100 |
pineal body | 2.52e-09 | 2 |
regional part of epithalamus | 2.52e-09 | 2 |
secretory circumventricular organ | 2.52e-09 | 2 |
circumventricular organ | 2.52e-09 | 2 |
epithalamus | 2.52e-09 | 2 |
lateral plate mesoderm | 4.91e-09 | 203 |