FFCP PHASE1:Hg19::chr1:207205989..207206000,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28667 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BW04 | |||
|association_with_transcript=91bp_to_ENST00000359470_5end | |||
|coexpression_cluster_id=C1844 | |||
|description=CAGE_peak_4_at_C1orf116_5end | |||
|id=chr1:207205989..207206000,- | |||
|ontology_enrichment_celltype=CL:0002076!5.29e-28!43;CL:0000066!8.76e-27!254;CL:0000223!2.26e-21!59;CL:0002251!1.62e-16!21;CL:0002368!3.73e-13!13;CL:0002202!7.12e-11!9;CL:0002632!7.12e-11!9;CL:0002159!5.83e-07!13;CL:0000244!5.91e-07!4;CL:0000731!5.91e-07!4;CL:0002327!7.55e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.52e-20;42!CL:0002368;4.63e-18;13!CL:0002202;1.82e-12;9!CL:0002632;1.82e-12;9!CL:0002251;6.45e-11;20!CL:0000307;1.39e-10;3!CL:0002159;2.31e-10;14!CL:0002231;4.71e-10;3!CL:0002327;4.96e-08;4!CL:0000244;1.01e-07;4!CL:0000731;1.01e-07;4!CL:0000575;1.41e-07;2!CL:0000317;3.10e-07;2!CL:1000448;3.10e-07;2!CL:0002308;3.10e-07;2!CL:0002140;3.10e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.17e-27,42;CL:0000066,7.27e-21,253;CL:0000223,6.41e-18,58;CL:0002368,9.92e-18,13;CL:0002202,1.76e-12,9;CL:0002632,1.76e-12,9;CL:0002251,1.01e-10,20;CL:0000068,1.80e-10,3;CL:0000069,1.80e-10,3;CL:0000307,1.80e-10,3;CL:0000377,1.80e-10,3;CL:0002159,2.63e-10,14;CL:0002231,5.12e-10,3;CL:0002327,3.57e-08,4;CL:0000244,6.62e-08,4;CL:0000731,6.62e-08,4;CL:0000575,1.33e-07,2;CL:0000317,4.19e-07,2;CL:1000448,4.19e-07,2;CL:0002308,4.19e-07,2;CL:0002140,4.19e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.39e-10;3!CL:0000223;1.60e-10;58!UBERON:0008814;3.10e-07;2!UBERON:0010056;3.10e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!4.09e-16!14;DOID:305!2.85e-13!106;DOID:299!8.39e-08!25;DOID:0050687!1.62e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.99e-10;14!DOID:3493;1.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.01e-10,14;DOID:3493,2.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.30e-30!169;UBERON:0000925!3.30e-30!169;UBERON:0006595!3.30e-30!169;UBERON:0001007!3.83e-24!155;UBERON:0001555!3.83e-24!155;UBERON:0007026!3.83e-24!155;UBERON:0004921!2.82e-19!129;UBERON:0004185!2.82e-19!129;UBERON:0000077!2.13e-17!130;UBERON:0005911!1.09e-16!82;UBERON:0005153!5.56e-15!37;UBERON:0001004!1.87e-14!72;UBERON:0000161!2.33e-14!35;UBERON:0006554!2.57e-12!44;UBERON:0001008!6.84e-12!45;UBERON:0005178!1.80e-11!34;UBERON:0002224!1.80e-11!34;UBERON:0005157!1.90e-11!51;UBERON:0000344!2.88e-11!12;UBERON:0005181!5.50e-11!35;UBERON:0000065!7.68e-11!53;UBERON:0001041!2.23e-10!98;UBERON:0000464!4.72e-10!104;UBERON:0000466!8.95e-10!126;UBERON:0007196!1.49e-09!14;UBERON:0001558!1.49e-09!14;UBERON:0000166!1.71e-09!21;UBERON:0005177!6.39e-09!107;UBERON:0003104!1.50e-08!238;UBERON:0009142!1.50e-08!238;UBERON:0000481!1.76e-08!347;UBERON:0003064!4.29e-08!37;UBERON:0003729!5.84e-08!5;UBERON:0002294!6.66e-08!7;UBERON:0001173!6.66e-08!7;UBERON:0004912!6.66e-08!7;UBERON:0000365!6.78e-08!5;UBERON:0001046!7.75e-08!19;UBERON:0003929!1.47e-07!54;UBERON:0000165!1.91e-07!28;UBERON:0000930!1.91e-07!28;UBERON:0008947!3.32e-07!38;UBERON:0003258!3.32e-07!38;UBERON:0002048!3.40e-07!22;UBERON:0000117!3.40e-07!22;UBERON:0000171!3.40e-07!22;UBERON:0000170!3.40e-07!22;UBERON:0005597!3.40e-07!22;UBERON:0000118!3.40e-07!22;UBERON:0000064!3.41e-07!219;UBERON:0000062!6.56e-07!511;UBERON:0001911!7.55e-07!4;UBERON:0005333!7.55e-07!4;UBERON:0008425!7.55e-07!4;UBERON:0005311!7.55e-07!4;UBERON:0009569!9.22e-07!113;UBERON:0003343!9.61e-07!4;UBERON:0004785!9.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;1.48e-08;20!UBERON:0000974;2.45e-08;6!UBERON:0001911;4.96e-08;4!UBERON:0002394;5.86e-08;4!UBERON:0003928;5.86e-08;4!UBERON:0001041;1.27e-07;14!UBERON:0005178;1.37e-07;34!UBERON:0002224;1.37e-07;34!UBERON:0003343;1.69e-07;4!UBERON:0004785;1.69e-07;4!UBERON:0002294;1.74e-07;7!UBERON:0001173;1.74e-07;7!UBERON:0002419;3.10e-07;2!UBERON:0007771;3.10e-07;2!UBERON:0003297;3.10e-07;2!UBERON:0001821;3.10e-07;2!UBERON:0003487;3.10e-07;2!UBERON:0001820;3.10e-07;2!UBERON:0007196;3.45e-07;15!UBERON:0001558;3.45e-07;15!UBERON:0000165;3.46e-07;28!UBERON:0005181;3.64e-07;35!UBERON:0001555;4.74e-07;54!UBERON:0000161;5.74e-07;19!UBERON:0000166;5.74e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.68e-17,160;UBERON:0000925,4.68e-17,160;UBERON:0006595,4.68e-17,160;UBERON:0001007,1.71e-11,145;UBERON:0001555,1.71e-11,145;UBERON:0007026,1.71e-11,145;UBERON:0001004,3.02e-10,74;UBERON:0004921,3.43e-10,118;UBERON:0001041,1.29e-09,87;UBERON:0005157,1.13e-08,47;UBERON:0000344,1.59e-08,20;UBERON:0005153,3.00e-08,37;UBERON:0001911,3.57e-08,4;UBERON:0005333,3.57e-08,4;UBERON:0008425,3.57e-08,4;UBERON:0005311,3.57e-08,4;UBERON:0000065,4.37e-08,54;UBERON:0000161,5.43e-08,36;UBERON:0005178,1.20e-07,34;UBERON:0002224,1.20e-07,34;UBERON:0000166,1.48e-07,22;UBERON:0003102,1.58e-07,99;UBERON:0003343,1.84e-07,4;UBERON:0004785,1.84e-07,4;UBERON:0005181,2.25e-07,35;UBERON:0007196,3.38e-07,15;UBERON:0001558,3.38e-07,15;UBERON:0006554,3.48e-07,47;UBERON:0002419,4.19e-07,2;UBERON:0007771,4.19e-07,2;UBERON:0003297,4.19e-07,2;UBERON:0001821,4.19e-07,2;UBERON:0003487,4.19e-07,2;UBERON:0001820,4.19e-07,2;UBERON:0005089,4.19e-07,2;UBERON:0005088,4.19e-07,2;UBERON:0005911,5.00e-07,82;UBERON:0001008,5.53e-07,48;UBERON:0000165,8.46e-07,29;UBERON:0000930,8.46e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,6.97801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.409647350226,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,2.5500670180478,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,1.43402297694502,0.243947412259191,0.132529768321485,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,3.62175941848464,0,2.21163739305588,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0.283550194484773,3.31366534000539,1.74380363108377,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,1.60405176242628,3.31491560169227,0,0,0.131124414959424,1.80479845162965,1.30926073077505,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,2.29388645740534,1.66215201785745,0.671624264166535,0,0,0,0,0,0.206082023295445,0,0,1.14853107599234,2.60024098414608,0,0,0,0,0,0,0,0,0,0,1.15314040419064,1.02090169995667,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,3.35151137767894,3.26672954583968,0.282431402330337,0.43050537267123,5.05414427002877,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0.18714054040822,0,0,0,0,2.3874448473769,0.296964680832639,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,2.87578723671446,1.61119057208048,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0.910347586283997,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0.979396848954886,0.282706142867882,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.173559738335131,4.01768829398948,0.69647365264322,0,0,0,0,0,3.58859361007152,0,0,0,0,0,0.782205530939212,1.04206466326994,0.426905989478705,0.19980960958213,0.288180834308212,0,0,0.576219191952599,0,2.59263438078475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0,2.0126081255956,0.0788057072991982,0.209818352539992,0,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,3.09683496446315,0.943225830597996,1.65695622138878,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,1.29766695682514,1.46742878817343,2.65709032145778,0,0,0,0,0,0,0,0.163771917510097,4.28782650029431,0,0,0,0,0,0,0.992422356778588,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0.111231401892069,0.39246546425257,0,0.840816489941367,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0.414432328326074,0,2.07377898544228,1.29068207646083,0,0,0,0,0,0,0.223710863595585,1.3741032706134,3.65753774946808,0,0,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0.848915739187391,0.874238242015829,0,0,0.471353094203252,0,0,0,0,0,0,0,1.42843150884526,2.82315897372553,0.0802413666891683,1.46067277649303,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0.0645889098360061,0,0.112131862580613,0,0,1.52401723527873,0.342233301085281,1.6164492723501,0.502055437748735,0.332660356546013,0.325613074443898,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p4@C1orf116 | |||
}} |
Revision as of 23:51, 10 January 2014
Short description: | p4@C1orf116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1orf116_5end |
Coexpression cluster: | C1844_squamous_epidermoid_bronchioalveolar_Corneal_Alveolar_Esophageal_Urothelial |
Association with transcript: | 91bp_to_ENST00000359470_5end |
EntrezGene: | C1orf116 |
HGNC: | 28667 |
UniProt: | Q9BW04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.17e-27 | 42 |
epithelial cell | 7.27e-21 | 253 |
endodermal cell | 6.41e-18 | 58 |
respiratory epithelial cell | 9.92e-18 | 13 |
epithelial cell of tracheobronchial tree | 1.76e-12 | 9 |
epithelial cell of lower respiratory tract | 1.76e-12 | 9 |
epithelial cell of alimentary canal | 1.01e-10 | 20 |
duct epithelial cell | 1.80e-10 | 3 |
branched duct epithelial cell | 1.80e-10 | 3 |
tracheal epithelial cell | 1.80e-10 | 3 |
tracheoblast | 1.80e-10 | 3 |
general ecto-epithelial cell | 2.63e-10 | 14 |
epithelial cell of prostate | 5.12e-10 | 3 |
mammary gland epithelial cell | 3.57e-08 | 4 |
transitional epithelial cell | 6.62e-08 | 4 |
urothelial cell | 6.62e-08 | 4 |
corneal epithelial cell | 1.33e-07 | 2 |
sebum secreting cell | 4.19e-07 | 2 |
epithelial cell of sweat gland | 4.19e-07 | 2 |
epithelial cell of skin gland | 4.19e-07 | 2 |
acinar cell of sebaceous gland | 4.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.01e-10 | 14 |
signet ring cell adenocarcinoma | 2.02e-07 | 2 |