FFCP PHASE1:Hg19::chr1:185703496..185703509,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19194 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RW7 | |||
|association_with_transcript=-173bp_to_ENST00000271588,ENST00000367492,NM_031935,uc001grq.1_5end | |||
|coexpression_cluster_id=C2546 | |||
|description=CAGE_peak_2_at_HMCN1_5end | |||
|id=chr1:185703496..185703509,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-20!180;CL:0000057!1.06e-09!75;CL:0002494!5.66e-08!16;CL:0000393!5.91e-07!60;CL:0000211!5.91e-07!60;CL:0000187!6.49e-07!54;CL:0002620!8.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.68e-10;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.96e-10,16;CL:0000057,6.25e-09,76;CL:0002570,9.74e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.56e-15!84;UBERON:0001009!1.31e-12!113;UBERON:0007100!1.76e-12!27;UBERON:0000468!5.98e-12!659;UBERON:0004535!7.65e-12!110;UBERON:0000948!1.13e-11!24;UBERON:0005498!1.13e-11!24;UBERON:0004140!1.13e-11!24;UBERON:0009881!1.13e-11!24;UBERON:0004141!1.13e-11!24;UBERON:0003084!1.13e-11!24;UBERON:0007005!1.13e-11!24;UBERON:0004139!1.13e-11!24;UBERON:0004291!1.13e-11!24;UBERON:0002049!4.44e-09!79;UBERON:0007798!4.44e-09!79;UBERON:0000475!1.30e-08!365;UBERON:0001981!1.50e-08!60;UBERON:0007500!1.50e-08!60;UBERON:0004537!1.50e-08!60;UBERON:0006965!1.50e-08!60;UBERON:0001637!4.17e-08!42;UBERON:0003509!4.17e-08!42;UBERON:0004572!4.17e-08!42;UBERON:0000055!9.21e-08!69;UBERON:0004290!5.70e-07!70;UBERON:0003914!6.19e-07!118;UBERON:0002385!6.50e-07!63;UBERON:0001015!6.50e-07!63;UBERON:0000383!6.50e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.88e-15;25!UBERON:0000948;1.20e-14;22!UBERON:0002050;3.58e-07;5!UBERON:0005423;3.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.98e-15,27;UBERON:0000948,1.04e-14,24;UBERON:0005498,1.04e-14,24;UBERON:0004140,1.04e-14,24;UBERON:0009881,1.04e-14,24;UBERON:0004141,1.04e-14,24;UBERON:0003084,1.04e-14,24;UBERON:0007005,1.04e-14,24;UBERON:0004139,1.04e-14,24;UBERON:0004291,1.04e-14,24;UBERON:0004872,9.75e-12,83;UBERON:0001009,1.00e-08,112;UBERON:0004535,2.58e-08,109;UBERON:0004797,3.29e-08,7 | |||
|phase1_expression=2.54349730978779,2.14100523890983,0.986680828671798,1.0007329835313,1.78784437770915,0.872338524100369,0,3.15859936713415,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0,0.602694528023977,0,0,1.60057375499824,0.612002073732759,3.76145665773705,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2568239576754,2.68280343881454,1.40648818027883,1.80719576192283,2.00535164254356,2.02785126545153,4.7717156823066,0.486634870302636,4.91581049253153,2.21729397462564,1.31752178539689,1.57174890597255,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,1.69592382577203,0.838998872419812,0.275118041940067,1.04497483268405,1.03366703667732,1.06729878806013,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.714397826272638,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,0,6.33152558322899,13.5057364429483,32.6993747653648,6.73869926176878,5.04609840128076,1.06748995729705,5.18001851676036,21.4735614425839,2.55950276932407,3.10577615915572,0.756787138224657,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.161872944368132,0.561803226808994,0.204154171254893,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0,0.250237039743928,0,2.19488810440419,0.919463387397059,1.50238058906597,0.794025282120147,3.40840307808838,11.3185416073841,0.635795703478686,2.40072876867522,2.47326070172253,4.12224864073007,2.41951913231067,10.6329089311998,4.67697624773753,1.7670364197088,5.98324341174946,3.71785930683267,27.3357386237793,6.64963848302426,1.52604533079439,0,0,0,0.487894824518382,0.530119073285941,0.464775771478074,0.621966330092223,0.252320850875628,0,3.12899064659632,2.57296375277154,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,1.77236972004421,0,0,0.514703430895577,0.878002283269004,0,0,0.185176890317059,0,0,0,0.231860809950154,10.4493737869881,0.433099343283221,0,0.380508304469197,3.95102198979638,2.57545848628462,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0,0,0.207328115540772,0,0.25248486685276,0,0.381988425558278,0,0,0.822619941626588,3.90445975197093,3.14409075893636,0.224262168690721,0,0.2933531432838,6.07577064061555,3.57656445851882,1.690605505112,6.11657668145202,2.08014873822732,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,1.20575750823834,0,0.099972991182057,0,0,0,13.6586167630202,8.04033550838797,1.42636905040718,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.736148950314839,0,0,2.07970861530807,0.178428988797162,0.157702415033935,1.99140405487612,1.20378439891088,2.27407504055985,0,3.98535359121262,3.68738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,1.98486246255021,23.7866058596497,3.92924132206303,1.15325234330131,18.933168215468,2.57366273829772,0,0.616838775210622,6.39222211127257,4.27061211271807,0,2.67283870457906,0,0,0.0920809889358963,1.14814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,3.19427136107939,2.7470839445503,3.05285149706176,0,0.650060246036521,6.42735719376638,0.580024309752732,0.154048617114644,0.614014698904518,0,1.93356440762893,1.74020032697074,0.767039646744908,5.2528901031575,0,0,0.127612712494584,0.10115778085555,0,3.46293581513704,1.3940745403212,1.23213432070436,0.532306030317022,0.869932992075073,0.74129687641568,4.43687148900173,0.372158369359667,2.21465597303108,0.190630193923825,0,0,1.27281299170375,0,0.719489830333259,1.37268514868027,0.706874414074119,2.83055474202642,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0.136499911407986,1.41405431953713,7.910568163417,2.75682671773062,3.3171948762061,0.876901770507525,0,0.655894752046633,2.84074527747786,0.6196469961995,0.563391205064483,1.00387946542836,0.392996164052485,3.92338156629375,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,4.80708320073629,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,2.42721043499027,0,0,0,0.296964680832639,0,0,0,0.556543525114529,0,0,25.1052465196348,1.38141957765574,0,0,0,1.24415835064723,0,0,0,0.887790650732402,0,0,0,0.278304294485554,0,0.520855522170466,0,1.44999915086959,0,0.254253650292766,0.236387681767936,0,11.3725799219469,0,0,0.120596438625408,0,0,0.295547618953547,0.658156191461918,0,0.278847488557207,2.30850775511391,0.683652335082007,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.432777279484182,0.995261931078505,1.23840590304675,1.22206028986725,2.6686901581256,2.47127877893006,2.8193926366473,0.134802265961354,7.2231988256891,0,0,0,0,0,1.20990716048664,0.30607276163049,1.0741718536843,0.60129367765797,0.31106457419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| |||
|short_description=p2@HMCN1 | |||
}} |
Revision as of 22:51, 10 January 2014
Short description: | p2@HMCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMCN1_5end |
Coexpression cluster: | C2546_neuroectodermal_neuroblastoma_granulosa_peripheral_Cardiac_Fibroblast_aorta |
Association with transcript: | -173bp_to_ENST00000271588, ENST00000367492, NM_031935, uc001grq.1_5end |
EntrezGene: | HMCN1 |
HGNC: | 19194 |
UniProt: | Q96RW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.96e-10 | 16 |
fibroblast | 6.25e-09 | 76 |
mesenchymal stem cell of adipose | 9.74e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.98e-15 | 27 |
heart | 1.04e-14 | 24 |
primitive heart tube | 1.04e-14 | 24 |
primary heart field | 1.04e-14 | 24 |
anterior lateral plate mesoderm | 1.04e-14 | 24 |
heart tube | 1.04e-14 | 24 |
heart primordium | 1.04e-14 | 24 |
cardiac mesoderm | 1.04e-14 | 24 |
cardiogenic plate | 1.04e-14 | 24 |
heart rudiment | 1.04e-14 | 24 |
splanchnic layer of lateral plate mesoderm | 9.75e-12 | 83 |
circulatory system | 1.00e-08 | 112 |
cardiovascular system | 2.58e-08 | 109 |
blood vessel layer | 3.29e-08 | 7 |