FFCP PHASE1:Hg19::chr1:183559838..183559845,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |||
|TSSclassifier=weak | |||
|UniProt=E9PHX3,E9PHJ2,P19878,B4DKQ7,B4DQA7 | |||
|association_with_transcript=-99bp_to_ENST00000392014,ENST00000413720,ENST00000418089,NM_000433,NM_001190789,NM_001190794,uc001gqj.3,uc010pod.1,uc010poe.1_5end | |||
|description=CAGE_peak_13_at_NCF2_5end | |||
|id=chr1:183559838..183559845,- | |||
|ontology_enrichment_celltype=CL:0000990!2.62e-18!8;CL:0000738!6.46e-17!140;CL:0000451!7.09e-15!10;CL:0002032!1.77e-13!165;CL:0000837!1.77e-13!165;CL:0000840!4.43e-13!5;CL:0001029!4.43e-13!5;CL:0000037!1.07e-12!172;CL:0000566!1.07e-12!172;CL:0000766!3.53e-12!76;CL:0002031!5.47e-12!124;CL:0000988!1.11e-11!182;CL:0002087!2.81e-11!119;CL:0002009!5.31e-11!65;CL:0000763!9.82e-11!112;CL:0000049!9.82e-11!112;CL:0000557!7.74e-10!71;CL:0002194!1.05e-09!63;CL:0000576!1.05e-09!63;CL:0000040!1.05e-09!63;CL:0000559!1.05e-09!63;CL:0000453!6.46e-09!5;CL:0000839!1.74e-08!70;CL:0000945!7.74e-07!24;CL:0000826!7.74e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.48e-12;2!CL:0000945;6.48e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.48e-12,2;CL:0000945,5.28e-09,24;CL:0000826,5.28e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.66e-12!102;UBERON:0003061!2.66e-12!102;UBERON:0002193!7.77e-11!112;UBERON:0002371!2.02e-08!80;UBERON:0001474!1.21e-07!86;UBERON:0002405!6.93e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.18e-14;15!UBERON:0000179;7.18e-14;15!UBERON:0000463;7.18e-14;15!UBERON:0002390;2.63e-11;32!UBERON:0002106;1.17e-08;3!UBERON:0002193;2.26e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.99e-14,15;UBERON:0000179,9.99e-14,15;UBERON:0000463,9.99e-14,15;UBERON:0002106,1.21e-08,3;UBERON:0004854,1.21e-08,3;UBERON:0009034,1.21e-08,3;UBERON:0002095,1.21e-08,3;UBERON:0004782,1.21e-08,3;UBERON:0003281,1.21e-08,3;UBERON:0009664,1.21e-08,3;UBERON:0002296,1.21e-08,3;UBERON:0005602,1.21e-08,3;UBERON:0001179,1.21e-08,3;UBERON:0006293,1.21e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.64201178899891,1.49550484495991,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,1.01489521846434,0,1.13929437434833,0,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p13@NCF2 | |||
}} |
Revision as of 22:43, 10 January 2014
Short description: | p13@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NCF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000392014, ENST00000413720, ENST00000418089, NM_000433, NM_001190789, NM_001190794, uc001gqj.3, uc010pod.1, uc010poe.1_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | E9PHX3E9PHJ2P19878B4DKQ7B4DQA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.48e-12 | 2 |
lymphocyte of B lineage | 5.28e-09 | 24 |
pro-B cell | 5.28e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 9.99e-14 | 15 |
haemolymphatic fluid | 9.99e-14 | 15 |
organism substance | 9.99e-14 | 15 |
spleen | 1.21e-08 | 3 |
gastrointestinal system mesentery | 1.21e-08 | 3 |
stomach region | 1.21e-08 | 3 |
mesentery | 1.21e-08 | 3 |
gastrointestinal system serosa | 1.21e-08 | 3 |
mesentery of stomach | 1.21e-08 | 3 |
gut mesentery | 1.21e-08 | 3 |
dorsal mesentery | 1.21e-08 | 3 |
dorsal mesogastrium | 1.21e-08 | 3 |
peritoneal cavity | 1.21e-08 | 3 |
spleen primordium | 1.21e-08 | 3 |