FFCP PHASE1:Hg19::chr1:162838597..162838628,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28736 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JSG0,E9PMF4,Q86UF4 | |||
|association_with_transcript=0bp_to_ENST00000367911,ENST00000367912,NM_178550,uc001gck.2,uc009wux.1_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_2_at_C1orf110_5end | |||
|id=chr1:162838597..162838628,- | |||
|ontology_enrichment_celltype=CL:1001319!2.06e-08!1;CL:1000600!2.06e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.46e-10;7!CL:0000586;2.46e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.35e-10,7;CL:0000586,2.35e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.12e-09;2!UBERON:0008814;1.57e-09;2!UBERON:0010056;1.57e-09;2!UBERON:0008947;1.92e-09;29!UBERON:0009117;1.67e-07;10!UBERON:0005564;1.67e-07;10 | |||
|ontology_enrichment_disease=DOID:2513!1.13e-08!1;DOID:0050619!1.42e-08!1;DOID:1357!1.42e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.87e-16!2;UBERON:0000341!1.87e-16!2;UBERON:0000065!4.99e-10!53;UBERON:0005178!5.20e-10!34;UBERON:0002224!5.20e-10!34;UBERON:0005181!1.06e-09!35;UBERON:0002171!5.28e-09!1;UBERON:0006518!5.28e-09!1;UBERON:0008949!5.28e-09!1;UBERON:0000101!5.28e-09!1;UBERON:0002167!5.28e-09!1;UBERON:0001041!9.13e-09!98;UBERON:0002372!9.74e-09!1;UBERON:0001961!9.74e-09!1;UBERON:0001744!9.74e-09!1;UBERON:0001735!9.74e-09!1;UBERON:0001004!1.11e-08!72;UBERON:0001764!1.42e-08!1;UBERON:0001825!1.42e-08!1;UBERON:0000077!1.55e-08!130;UBERON:0004645!2.06e-08!1;UBERON:0001256!2.06e-08!1;UBERON:0001259!2.06e-08!1;UBERON:0000464!3.93e-08!104;UBERON:0000974!2.75e-07!10;UBERON:0004921!3.04e-07!129;UBERON:0004185!3.04e-07!129;UBERON:0001042!3.72e-07!10;UBERON:0009145!3.72e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.62e-34;2!UBERON:0000341;6.00e-34;2!UBERON:0002171;1.03e-17;1!UBERON:0006518;1.03e-17;1!UBERON:0008949;1.03e-17;1!UBERON:0000101;1.03e-17;1!UBERON:0002167;1.03e-17;1!UBERON:0000974;5.08e-12;6!UBERON:0003126;1.68e-10;7!UBERON:0001005;1.68e-10;7!UBERON:0000473;3.70e-09;8!UBERON:0003135;6.74e-07;11!UBERON:0001723;9.11e-07;3!UBERON:0001033;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.29e-34,2;UBERON:0000341,4.29e-34,2;UBERON:0002171,8.72e-18,1;UBERON:0006518,8.72e-18,1;UBERON:0008949,8.72e-18,1;UBERON:0000101,8.72e-18,1;UBERON:0002167,8.72e-18,1;UBERON:0003126,1.77e-10,7;UBERON:0001005,1.77e-10,7;UBERON:0000473,3.55e-09,8;UBERON:0005178,4.54e-08,34;UBERON:0002224,4.54e-08,34;UBERON:0005181,7.59e-08,35;UBERON:0000065,1.16e-07,54;UBERON:0000974,1.33e-07,10;UBERON:0008947,3.03e-07,38;UBERON:0003258,3.03e-07,38;UBERON:0003135,6.54e-07,11;UBERON:0001723,9.12e-07,3;UBERON:0001033,9.12e-07,3;UBERON:0010056,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60051469260776,2.19172787076177,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0.72045208577053,0,7.72177490378841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,1.10043013569766,1.65695622138878,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.83579893535567,0,1.19463369395298,0,0,0,0,0,5.75731751132648,1.66645102024618,0.0645889098360061,0,0,0,0,1.52401723527873,0,0.404112318087525,11.7624416843989,1.33064142618405,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@C1orf110 | |||
}} |
Revision as of 21:58, 10 January 2014
Short description: | p2@C1orf110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf110_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000367911, ENST00000367912, NM_178550, uc001gck.2, uc009wux.1_5end |
EntrezGene: | C1orf110 |
HGNC: | 28736 |
UniProt: | Q5JSG0E9PMF4Q86UF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.35e-10 | 7 |
germ cell | 2.35e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.29e-34 | 2 |
throat | 4.29e-34 | 2 |
lower lobe of right lung | 8.72e-18 | 1 |
right lung lobe | 8.72e-18 | 1 |
lower lobe of lung | 8.72e-18 | 1 |
lobe of lung | 8.72e-18 | 1 |
right lung | 8.72e-18 | 1 |
trachea | 1.77e-10 | 7 |
respiratory airway | 1.77e-10 | 7 |
testis | 3.55e-09 | 8 |
thoracic cavity element | 4.54e-08 | 34 |
thoracic cavity | 4.54e-08 | 34 |
thoracic segment organ | 7.59e-08 | 35 |
respiratory tract | 1.16e-07 | 54 |
neck | 1.33e-07 | 10 |
respiratory primordium | 3.03e-07 | 38 |
endoderm of foregut | 3.03e-07 | 38 |
male reproductive organ | 6.54e-07 | 11 |
tongue | 9.12e-07 | 3 |
gustatory system | 9.12e-07 | 3 |
future tongue | 9.12e-07 | 3 |