FFCP PHASE1:Hg19::chr1:156722167..156722188,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3068 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SZ07,P51858 | |||
|association_with_transcript=51bp_to_ENST00000368206,NM_001126050,uc009wse.2,uc010phr.1_5end | |||
|description=CAGE_peak_10_at_HDGF_5end | |||
|id=chr1:156722167..156722188,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-09!180;CL:0002321!3.49e-07!248;CL:0000066!4.78e-07!254;CL:0000220!8.76e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.39e-09!235;DOID:14566!4.65e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.57e-07!365;UBERON:0001737!4.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.50e-15;9!UBERON:0001557;1.50e-15;9!UBERON:0000072;9.09e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.78e-16,9;UBERON:0008947,3.16e-07,38;UBERON:0003258,3.16e-07,38;UBERON:0001557,4.36e-07,19 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,0,0,0.872338524100369,0,1.89515962028049,0,0.982935746006035,0.697801167972428,0.218441372130172,0.263766978228454,0.618831764800233,1.65698687863958,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0.492484232307152,0.204000691244253,1.56727360739044,0.572471974262113,0.684372125364421,0.125542639594803,0.382067028739756,0.164201178899891,0.472264687882075,0,0.383829398097213,0,0,0.30120591877825,0,1.16200800870452,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.639312809217652,0.722878304769133,0.50133791063589,0.869079113764942,0,0,0.472674085820339,0.443458794925128,0.351339142772504,0.392937226493138,0.364295288292542,0.370784442784429,0.97364218096405,0,0.132957960518865,0,0,0,0.39752481473341,1.72046919021225,0,0,1.25849830862972,0.825354125820202,0.835979866147242,0.516833518338658,0,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0,0.44905874525234,0,0,0,0.549605231791222,0,0,0.872188104285069,0.993943903390637,0.379891534993739,0.662045904066094,0,0,1.68203280042692,0,0.74000264525148,0,0.538842688278752,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.737005903870608,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0.505008341862199,0.250237039743928,0.277064115484183,0.438977620880838,0.919463387397059,0.300476117813194,0.113432183160021,0.358779271377724,0,0.423863802319124,0,0.309157587715317,0.257640540045629,0.744467425326359,0.506328996723799,0.389748020644795,0.252433774244115,0.644349290496095,0.161646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0.966304265816484,0.272746120590835,0,0.731842236777572,0.927708378250397,0.580969714347592,0.10366105501537,1.00928340350251,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0.721879481669586,2.01121560067735,1.85443159085912,0.723033089650446,1.43382164552112,0.871517776369625,1.89816495288877,2.02246962240247,2.15843611637881,1.53898862778556,0,0,0.8231480226628,1.47008711385542,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.658501712451753,1.1240175325762,0.201057944823262,0,0.651616610620649,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0,0.380508304469197,0.790204397959275,1.71697232418975,0,0.234004265139238,0,0,1.17587489739202,0.992425680696705,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0,0.336393253036082,0,0.07333828582095,0.904902010304444,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,1.3996218765488,0,0,0,0.239624855491583,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0.623912584592421,0.892144943985809,0.788512075169673,0.468565659970853,0.300946099727719,0,0,0,0.737476674166813,0.260650843404249,0,0,0,0,0,1.21251028578504,1.66435439510497,0,0.992431231275107,0.61384789315225,0.280660094433074,0.896974044789907,1.02341449813341,1.44768529029247,0,0.616838775210622,0,0.328508624055237,0,0.116210378459959,0.362578348774867,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.131124414959424,1.35359883872224,0.616122696835318,0,0,0.949964660035881,0,0.170093705276516,0,0,0.541892875087706,2.00675909541941,1.52925763827023,0,1.11937377361089,0.438519753291869,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.640986253728404,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0.580066775656914,0.255679882248303,0.267096106940212,0.495854746082934,0.576570202095319,0.382838137483752,0.2023155617111,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,0.429374660225974,0,0.632758849437452,0.571890581771475,0.511795582622668,0,0.636406495851874,0.78494864019923,0.179872457583315,0.823611089208164,0.117812402345686,0.606547444719948,0,0,0,0.974853958525138,0,0.136499911407986,0.565621727814851,0,0.551365343546124,3.3171948762061,1.75380354101505,1.15755106853338,0.655894752046633,0.608731130888112,0.30982349809975,1.12678241012897,0,0.491245205065606,0.35667105148125,0,0.844430541190656,0,0.379473173765715,0.349934720244983,0.865999014529609,0.670302275535787,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,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| |||
|short_description=p10@HDGF | |||
}} |
Revision as of 21:30, 10 January 2014
Short description: | p10@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HDGF_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_ENST00000368206, NM_001126050, uc009wse.2, uc010phr.1_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | Q5SZ07P51858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.78e-16 | 9 |
respiratory primordium | 3.16e-07 | 38 |
endoderm of foregut | 3.16e-07 | 38 |
upper respiratory tract | 4.36e-07 | 19 |