FFCP PHASE1:Hg19::chr1:156076499..156076515,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6636 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENST00000515711_5end | |||
|description=CAGE_peak_15_at_LMNA_5end | |||
|id=chr1:156076499..156076515,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.66e-14!140;CL:0002031!4.95e-13!124;CL:0002087!1.22e-11!119;CL:0000860!4.03e-11!45;CL:0002057!3.51e-10!42;CL:0000988!2.53e-09!182;CL:0000037!2.87e-08!172;CL:0000566!2.87e-08!172;CL:0000838!3.15e-08!52;CL:0000542!7.51e-08!53;CL:0000051!7.51e-08!53;CL:0002032!1.30e-07!165;CL:0000837!1.30e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.75e-16;6!CL:0000084;2.29e-11;25!CL:0000791;9.45e-11;18!CL:0000789;9.45e-11;18!CL:0002419;9.45e-11;18!CL:0000860;1.04e-10;33!CL:0002057;1.04e-10;33!CL:0000623;1.75e-09;3!CL:0000767;4.04e-09;3!CL:0000898;9.17e-09;3!CL:0000542;1.16e-08;53!CL:0001014;1.50e-07;2!CL:0001016;1.50e-07;2!CL:0002087;3.71e-07;104!CL:0000473;3.73e-07;39!CL:0000234;3.73e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.13e-23,136;CL:0002031,1.81e-21,120;CL:0002032,3.69e-18,161;CL:0000837,3.69e-18,161;CL:0000037,5.62e-17,168;CL:0000988,9.83e-17,177;CL:0000624,1.62e-16,6;CL:0002087,2.59e-15,115;CL:0000838,1.86e-13,52;CL:0000542,4.09e-13,53;CL:0000051,4.09e-13,53;CL:0000084,1.96e-11,25;CL:0000827,1.96e-11,25;CL:0000791,7.84e-11,18;CL:0000789,7.84e-11,18;CL:0002420,7.84e-11,18;CL:0002419,7.84e-11,18;CL:0000790,7.84e-11,18;CL:0000766,1.62e-10,72;CL:0000623,8.73e-10,3;CL:0000825,8.73e-10,3;CL:0000557,3.20e-09,67;CL:0000767,3.27e-09,3;CL:0000898,4.10e-09,3;CL:0000860,2.97e-08,42;CL:0002057,2.97e-08,42;CL:0001014,1.51e-07,2;CL:0001016,1.51e-07,2;CL:0000763,3.45e-07,108;CL:0000049,3.45e-07,108;CL:0000839,5.10e-07,66;CL:0000473,7.08e-07,48;CL:0000234,7.08e-07,48;CL:0002009,9.65e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;9.45e-11;18!CL:0000051;1.16e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-07!102;UBERON:0003061!1.20e-07!102;UBERON:0001474!2.31e-07!86;UBERON:0004765!3.91e-07!101;UBERON:0001434!3.91e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-07;9!UBERON:0001557;1.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.03e-07,82;UBERON:0002371,1.20e-07,76;UBERON:0001737,1.97e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0,0.247532705920093,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,2.75354993794233,1.91914699048606,1.08371286321253,0,0.6024118375565,0,0.0774672005803016,0,0.587200878669695,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0.697287110717054,0.822335776043652,1.23882548358041,1.1507695692886,0.512321413058201,1.18241114944293,0.689491361473237,1.93645405075148,2.70852973188684,0.188242339542605,1.91034305040492,1.12361742222542,1.22433556948361,1.28371610830437,5.75403413219137,0.659702600373432,0.199463657621632,0.852449501065388,0.290209238628584,1.13477044938228,0,0.502497330513487,1.5644487552606,0.65156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,3.41527781465669,1.76171156811282,3.05818582500183,5.28685314316103,0.560508562981536,0,1.180258620683,1.57204305099666,1.85041349099558,0,1.95553359980154,0.473447805734733,1.94826728407911,0,1.17842362989935,1.32920336750173,1.08321545506006,0,0,0,0,0,0.741432815810302,0.267540828089713,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,2.01606743224732,1.06976078313403,1.01377082717959,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0.936480230490962,0,0.448346041655403,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0.600182192168805,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.757301322732344,0.184099797284599,0,1.06502877754984,0.10075209822764,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.946454400318751,1.01150814046861,0.723033089650446,1.32352767278873,2.39667388501647,0,0.943819157121151,1.56977172100277,1.15424147083917,0,0,0.8231480226628,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0,0,0.290633938513962,0,0,0,14.9276243189356,3.747118788841,17.0427285125613,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,1.97030760201927,2.80315847317372,2.05348858047597,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0.587403472388222,0,0.206768026122887,0.647142602455851,0.213455115606889,0.606255142892519,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0.348631135379878,0.241718899183244,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,1.46139224653261,0,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0.75894634753143,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.19372242368845,0.296964680832639,0.614321404198464,0,0,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0.492339221844278,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,1.01701460117107,1.65471377237555,0.689486746482929,0.291604613383254,0,0,0,0,0.442317039724898,0,0.438770794307945,0.32681539055697,0,0.0769502585037971,0,0,0.0897576444097721,9.88691084490273,1.5950057986596,0,2.13213910407454,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0.210998064528027,0.326465616318295,0,0,0,0,0,2.96521128680622,0.494255755786011,0.522109747527277,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.391969589657511,0,0,0.51595809741485,0.290268993867255,0.438535902517113,0.328461828212837,0,0.0882561266915003,0,0,0,0.0633107959558787,1.17330829640882,0,0,1.39866726707491,0,0,0,0,0.248505071130865,0.235694034616795,0,0.104602846312333,0.305994652908965,0.28895058990151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| |||
|short_description=p15@LMNA | |||
}} |
Revision as of 21:22, 10 January 2014
Short description: | p15@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LMNA_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000515711_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 1.03e-07 | 82 |
bone marrow | 1.20e-07 | 76 |
larynx | 1.97e-07 | 9 |