FFCP PHASE1:Hg19::chr1:153347033..153347045,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10489 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=22bp_to_AB464695,HQ257882_5end | |||
|coexpression_cluster_id=C641 | |||
|description=CAGE_peak_3_at_S100A12_5end | |||
|id=chr1:153347033..153347045,- | |||
|ontology_enrichment_celltype=CL:0002057!5.39e-109!42;CL:0000860!4.59e-101!45;CL:0000766!1.20e-71!76;CL:0002194!4.16e-68!63;CL:0000576!4.16e-68!63;CL:0000040!4.16e-68!63;CL:0000559!4.16e-68!63;CL:0002009!9.65e-66!65;CL:0000839!2.06e-60!70;CL:0000557!1.96e-59!71;CL:0000763!1.07e-47!112;CL:0000049!1.07e-47!112;CL:0000738!4.43e-40!140;CL:0002087!9.86e-38!119;CL:0000037!3.53e-32!172;CL:0000566!3.53e-32!172;CL:0002031!7.38e-32!124;CL:0002032!1.42e-30!165;CL:0000837!1.42e-30!165;CL:0000988!8.41e-30!182;CL:0000767!5.55e-10!3;CL:0000094!6.96e-10!8;CL:0000134!9.61e-10!358;CL:0002320!2.37e-09!365;CL:0002393!1.18e-08!9;CL:0002397!1.18e-08!9;CL:0000219!5.65e-08!390;CL:0000081!4.22e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-99;33!CL:0002057;1.15e-99;33!CL:0000473;6.06e-72;39!CL:0000234;6.06e-72;39!CL:0000576;5.53e-53;48!CL:0000766;4.86e-32;69!CL:0000763;6.46e-15;100!CL:0002087;3.62e-14;104!CL:0000738;2.89e-10;136!CL:0000988;7.42e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.77e-102,42;CL:0002057,1.77e-102,42;CL:0000473,3.60e-89,48;CL:0000234,3.60e-89,48;CL:0002194,1.57e-70,59;CL:0000576,1.57e-70,59;CL:0000040,1.57e-70,59;CL:0000559,1.57e-70,59;CL:0002009,3.99e-68,61;CL:0000839,9.73e-63,66;CL:0000766,4.22e-62,72;CL:0000557,9.35e-62,67;CL:0000763,3.28e-40,108;CL:0000049,3.28e-40,108;CL:0002087,1.48e-37,115;CL:0000738,7.74e-34,136;CL:0002031,6.97e-33,120;CL:0000037,1.31e-26,168;CL:0002032,1.19e-25,161;CL:0000837,1.19e-25,161;CL:0000988,4.83e-25,177;CL:0000134,2.71e-10,354;CL:0002320,5.27e-10,361;CL:0000219,5.54e-09,386;CL:0000048,9.92e-08,427;CL:0000723,1.48e-07,433;CL:0000034,2.48e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.78e-76;42!CL:0000049;1.52e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-56!102;UBERON:0003061!2.71e-56!102;UBERON:0002193!7.47e-53!112;UBERON:0002371!9.96e-52!80;UBERON:0001474!1.78e-47!86;UBERON:0004765!4.84e-39!101;UBERON:0001434!4.84e-39!101;UBERON:0002405!3.83e-37!115;UBERON:0003081!6.22e-21!216;UBERON:0002204!7.04e-20!167;UBERON:0002384!8.12e-09!375;UBERON:0000926!2.66e-07!448;UBERON:0004120!2.66e-07!448;UBERON:0006603!2.66e-07!448;UBERON:0000178!2.69e-07!15;UBERON:0000179!2.69e-07!15;UBERON:0000463!2.69e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-54,76;UBERON:0001474,7.47e-50,82;UBERON:0002390,1.92e-48,98;UBERON:0003061,1.92e-48,98;UBERON:0004765,4.17e-45,90;UBERON:0002193,1.30e-43,108;UBERON:0002405,1.56e-43,93;UBERON:0001434,3.15e-40,100;UBERON:0002204,1.74e-22,167;UBERON:0003081,2.80e-21,203;UBERON:0000926,3.92e-12,315;UBERON:0004120,3.92e-12,315;UBERON:0006603,3.92e-12,315;UBERON:0002384,1.31e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,0,1.66198622559563,1.00272223735071,0.217010870715852,0,0,0,4.07115068582781,0.755751887377619,0.727752183563449,3.0215774797739,1.6446715520873,0.619412741790207,3.16461631554365,1.0246428261164,1.6553756092201,2.41321976515633,1.93645405075148,1.35426486594342,3.9530891303947,0.545812300115692,1.12361742222542,3.06083892370903,0.320929027076094,0.639337125799041,3.29851300186716,1.19678194572979,1.27867425159808,4.35313857942876,1.70215567407342,2.4912889959823,5.02497330513487,2.60741459210101,1.52032191293582,4.23779651843358,0.736555271975129,1.26584954976354,0,0.212604299965044,0.209658645508376,0.561643155732475,0.901061357049038,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@S100A12 | |||
}} |
Revision as of 20:59, 10 January 2014
Short description: | p3@S100A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A12_5end |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | 22bp_to_AB464695, HQ257882_5end |
EntrezGene: | S100A12 |
HGNC: | 10489 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.77e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.77e-102 | 42 |
defensive cell | 3.60e-89 | 48 |
phagocyte | 3.60e-89 | 48 |
monopoietic cell | 1.57e-70 | 59 |
monocyte | 1.57e-70 | 59 |
monoblast | 1.57e-70 | 59 |
promonocyte | 1.57e-70 | 59 |
macrophage dendritic cell progenitor | 3.99e-68 | 61 |
myeloid lineage restricted progenitor cell | 9.73e-63 | 66 |
myeloid leukocyte | 4.22e-62 | 72 |
granulocyte monocyte progenitor cell | 9.35e-62 | 67 |
myeloid cell | 3.28e-40 | 108 |
common myeloid progenitor | 3.28e-40 | 108 |
nongranular leukocyte | 1.48e-37 | 115 |
leukocyte | 7.74e-34 | 136 |
hematopoietic lineage restricted progenitor cell | 6.97e-33 | 120 |
hematopoietic stem cell | 1.31e-26 | 168 |
hematopoietic oligopotent progenitor cell | 1.19e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-25 | 161 |
hematopoietic cell | 4.83e-25 | 177 |
mesenchymal cell | 2.71e-10 | 354 |
connective tissue cell | 5.27e-10 | 361 |
motile cell | 5.54e-09 | 386 |
multi fate stem cell | 9.92e-08 | 427 |
somatic stem cell | 1.48e-07 | 433 |
stem cell | 2.48e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.65e-54 | 76 |
bone element | 7.47e-50 | 82 |
hematopoietic system | 1.92e-48 | 98 |
blood island | 1.92e-48 | 98 |
skeletal element | 4.17e-45 | 90 |
hemolymphoid system | 1.30e-43 | 108 |
immune system | 1.56e-43 | 93 |
skeletal system | 3.15e-40 | 100 |
musculoskeletal system | 1.74e-22 | 167 |
lateral plate mesoderm | 2.80e-21 | 203 |
mesoderm | 3.92e-12 | 315 |
mesoderm-derived structure | 3.92e-12 | 315 |
presumptive mesoderm | 3.92e-12 | 315 |
connective tissue | 1.31e-09 | 371 |