FFCP PHASE1:Hg19::chr1:108507832..108507875,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12659 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UKW4 | |||
|association_with_transcript=-66bp_to_ENST00000370056_5end | |||
|description=CAGE_peak_3_at_VAV3_5end | |||
|id=chr1:108507832..108507875,- | |||
|ontology_enrichment_celltype=CL:0000037!4.06e-48!172;CL:0000566!4.06e-48!172;CL:0000988!8.19e-45!182;CL:0002032!1.16e-43!165;CL:0000837!1.16e-43!165;CL:0000738!2.02e-39!140;CL:0002087!1.79e-32!119;CL:0002031!1.54e-30!124;CL:0000763!5.78e-30!112;CL:0000049!5.78e-30!112;CL:0000766!1.76e-25!76;CL:0000557!1.89e-20!71;CL:0000839!9.54e-20!70;CL:0002057!1.01e-19!42;CL:0002194!5.59e-19!63;CL:0000576!5.59e-19!63;CL:0000040!5.59e-19!63;CL:0000559!5.59e-19!63;CL:0002009!1.10e-17!65;CL:0000860!3.85e-17!45;CL:0000542!4.87e-12!53;CL:0000051!4.87e-12!53;CL:0000838!7.48e-12!52;CL:0000236!4.39e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-23;33!CL:0002057;3.36e-23;33!CL:0000473;1.33e-21;39!CL:0000234;1.33e-21;39!CL:0000576;1.50e-17;48!CL:0000766;2.02e-15;69!CL:0000763;2.56e-15;100!CL:0002087;5.40e-12;104!CL:0000738;5.74e-11;136!CL:0000236;1.36e-10;13!CL:0000988;1.46e-09;177!CL:0000542;7.83e-08;53!CL:0000791;2.55e-07;18!CL:0000789;2.55e-07;18!CL:0002419;2.55e-07;18!CL:0000084;2.74e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.39e-58,168;CL:0000988,2.21e-53,177;CL:0002032,3.79e-52,161;CL:0000837,3.79e-52,161;CL:0000738,2.10e-49,136;CL:0002087,1.84e-41,115;CL:0002031,5.13e-40,120;CL:0000763,1.48e-37,108;CL:0000049,1.48e-37,108;CL:0000766,7.84e-35,72;CL:0000557,5.57e-29,67;CL:0000839,6.28e-28,66;CL:0002194,4.46e-27,59;CL:0000576,4.46e-27,59;CL:0000040,4.46e-27,59;CL:0000559,4.46e-27,59;CL:0000473,1.64e-26,48;CL:0000234,1.64e-26,48;CL:0002009,1.16e-25,61;CL:0000860,1.28e-23,42;CL:0002057,1.28e-23,42;CL:0000838,3.64e-13,52;CL:0000542,1.01e-12,53;CL:0000051,1.01e-12,53;CL:0000134,9.69e-12,354;CL:0002320,6.47e-11,361;CL:0000236,1.27e-09,14;CL:0000219,1.69e-08,386;CL:0000034,1.78e-08,441;CL:0000048,4.48e-08,427;CL:0000723,6.56e-08,433;CL:0000791,1.30e-07,18;CL:0000789,1.30e-07,18;CL:0002420,1.30e-07,18;CL:0002419,1.30e-07,18;CL:0000790,1.30e-07,18;CL:0000084,1.79e-07,25;CL:0000827,1.79e-07,25;CL:0000094,8.27e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.71e-18;42!CL:0000049;3.26e-12;108!CL:0000051;7.83e-08;53!CL:0000790;2.55e-07;18 | |||
|ontology_enrichment_disease=DOID:8692!1.78e-09!31;DOID:1240!2.49e-09!39;DOID:2531!1.03e-07!51;DOID:0060083!1.03e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.71e-09;31!DOID:1240;2.07e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.49e-09,31;DOID:1240,3.50e-09,39;DOID:2531,8.52e-07,51;DOID:0060083,8.52e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.83e-23!112;UBERON:0002390!3.03e-21!102;UBERON:0003061!3.03e-21!102;UBERON:0002371!2.21e-17!80;UBERON:0001474!5.07e-17!86;UBERON:0002405!5.99e-16!115;UBERON:0004765!1.63e-12!101;UBERON:0001434!1.63e-12!101;UBERON:0007023!3.41e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.23e-34,108;UBERON:0002390,6.98e-31,98;UBERON:0003061,6.98e-31,98;UBERON:0002405,3.57e-30,93;UBERON:0002371,4.02e-26,76;UBERON:0001474,5.44e-24,82;UBERON:0004765,2.97e-20,90;UBERON:0001434,1.72e-16,100;UBERON:0002384,8.22e-10,371;UBERON:0003081,3.21e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,1.20538905604795,0,0,0.123121058076788,0,0,0.85870796139317,0.410623275218653,0,0.0764134057479513,0.164201178899891,0,3.54027849164014,4.98978217526377,0.77408061658038,0,0,0,0,0,9.68881449804996,6.09394949385065,6.21687787157439,3.03815219002193,1.34349284543955,0.971680998056939,3.34848237924443,5.08893835728477,4.1566353805769,5.33684934613196,5.81072592264212,9.04569353648017,5.57471467611186,1.1507695692886,2.56160706529101,2.60130452877444,3.10271112662957,5.16387746867061,4.06279459783025,3.9530891303947,5.73102915121476,4.71919317334678,3.97909060082173,8.02322567690234,5.11469700639233,2.30895910130701,2.99195486432448,1.70489900213078,3.77272010217159,5.6738522469114,4.35975574296902,2.00998932205395,4.69334626578181,1.73751075764093,3.02699751316684,5.15588690382591,2.21523671208619,0.845021145247767,0.637812899895131,2.09658645508376,1.12328631146495,0.750884464207532,1.44653028027372,0.570025487482497,0.19891667719909,0,3.51992488922645,5.46138611262132,10.6741110463627,6.40095333849761,4.80475184443215,9.77079147922622,9.91567309177293,12.4026988089597,17.0763890732835,15.8554041130153,10.7036503875064,21.1474125726441,12.3311883855938,2.37045676297569,1.96709770113833,2.35806457649499,1.85041349099558,0,4.56291173287027,4.2610302516126,0,0.222820913770347,7.9543595018206,6.86755073209225,6.77009659412539,0.768547918354051,0.260118695119756,0.164437904603676,0,0.289803085735052,0.741432815810302,1.07016331235885,0,0,0.383220493601921,0.34362744548263,1.01207876807801,1.91139248594458,0.651083453856419,1.90090408889675,1.35517607169996,1.27986611154418,0,2.13099526839615,1.64225599384209,4.43534835094411,11.2324882229073,3.76543450095277,0,0,0,0,0,0,0,0.486634870302636,4.34860158954712,2.88248216701333,6.32410456990508,0.589405839739707,0.728590576585084,0,0,0.174129737299267,0,19.556231193038,13.7278778587231,11.5151825412165,0,0,0,0,0,0,0,2.84258435086262,2.49036383880697,5.02080919147005,3.22263453687318,6.84244895146661,3.41686880567437,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0.487894824518382,0.265059536642971,0.464775771478074,0.621966330092223,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0,0,0,0,1.77236972004421,2.20731549707325,0,0.343135620597051,0,0,0.201057944823262,0,0,0,0,3.36198174427723,0.234817388471643,1.87676382089396,0.925971025153221,1.71228737011138,2.37061319387782,2.57545848628462,4.67812311566055,0,5.94524649154913,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0.492663237895943,1.05658120815871,3.93923419527467,10.9531164596891,3.66103056936502,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,6.32501818449095,0,0,0,0,0.410952645100767,0,0,5.12279976525011,7.11570997036407,5.26206448746968,4.06551398755941,0,2.31986643833309,0.335032530668698,0.637938751653163,5.24304916763028,5.9832291840805,9.11714129559278,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,2.89475236572042,1.94142780736755,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.510281115829547,0.647747748306418,0,0.541892875087706,0,0.509752546090077,0,0,0,0,0,0,0,0.824328093181778,0.27470839445503,0.330037999682352,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,1.12972560932135,0,0,0,0,3.04468565539302,2.29391162142713,2.27858874869665,2.62054953003568,2.05681136543097,0.648473311192717,2.16012574895246,1.58625035258854,0,0,0,0.743212700502875,0.28853842595289,3.05909926398181,18.0151688183569,4.59032554295478,3.83010740264733,10.1603319707464,10.0632801485112,6.45833509660955,12.7811420258588,0.783399478865116,30.0761372508081,7.11025466766734,0.481764225311099,0,1.27753871307098,0.687010689511529,6.45205605047762,12.3021859340829,6.67396566847634,1.56310476321632,0.278406173895242,8.61611792633986,0.270455678475983,7.66065526394986,11.278960407028,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0.562677665642051,0,0.16480387422676,0.211125408127993,0.19924798825107,2.21027132424918,0,0.613612095012929,0,0,0,0,0.511572370226872,0.394573622547734,0,0,0,0.927680981618513,0,0.7812832832557,1.04951999995435,0,0,0,0,0.689486746482929,0.291604613383254,0.347249989866585,0,0.482385754501632,0,1.10579259931225,1.18219047581419,1.97446857438575,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0.533034776018635,2.04386596391473,0.4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| |||
|short_description=p3@VAV3 | |||
}} |
Revision as of 19:53, 10 January 2014
Short description: | p3@VAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VAV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000370056_5end |
EntrezGene: | VAV3 |
HGNC: | 12659 |
UniProt: | Q9UKW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.23e-34 | 108 |
hematopoietic system | 6.98e-31 | 98 |
blood island | 6.98e-31 | 98 |
immune system | 3.57e-30 | 93 |
bone marrow | 4.02e-26 | 76 |
bone element | 5.44e-24 | 82 |
skeletal element | 2.97e-20 | 90 |
skeletal system | 1.72e-16 | 100 |
connective tissue | 8.22e-10 | 371 |
lateral plate mesoderm | 3.21e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.49e-09 | 31 |
leukemia | 3.50e-09 | 39 |
hematologic cancer | 8.52e-07 | 51 |
immune system cancer | 8.52e-07 | 51 |