FFCP PHASE1:Hg19::chr1:100435612..100435623,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11023 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D2,Q9BSB7 | |||
|association_with_transcript=72bp_to_NM_012243,uc001dsp.1,uc001dsq.1,uc009wdy.1_5end | |||
|description=CAGE_peak_2_at_SLC35A3_5end | |||
|id=chr1:100435612..100435623,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.94e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-24!115;UBERON:0001049!3.45e-23!57;UBERON:0005068!3.45e-23!57;UBERON:0006241!3.45e-23!57;UBERON:0007135!3.45e-23!57;UBERON:0001017!1.03e-21!82;UBERON:0005743!1.19e-20!86;UBERON:0000955!3.98e-20!69;UBERON:0006238!3.98e-20!69;UBERON:0002780!5.59e-20!41;UBERON:0001890!5.59e-20!41;UBERON:0006240!5.59e-20!41;UBERON:0000073!1.18e-19!94;UBERON:0001016!1.18e-19!94;UBERON:0002616!1.32e-19!59;UBERON:0003080!8.65e-19!42;UBERON:0001893!3.59e-17!34;UBERON:0002020!5.57e-17!34;UBERON:0003528!5.57e-17!34;UBERON:0002791!1.68e-16!33;UBERON:0001869!3.71e-16!32;UBERON:0002619!4.63e-14!22;UBERON:0001950!4.01e-13!20;UBERON:0000956!4.12e-13!25;UBERON:0000203!4.12e-13!25;UBERON:0003075!1.22e-12!86;UBERON:0007284!1.22e-12!86;UBERON:0002346!6.36e-12!90;UBERON:0000153!8.77e-12!129;UBERON:0007811!8.77e-12!129;UBERON:0000033!3.96e-11!123;UBERON:0004121!1.59e-10!169;UBERON:0000924!3.59e-10!173;UBERON:0006601!3.59e-10!173;UBERON:0003056!7.46e-10!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.45e-23;22!UBERON:0001950;6.65e-21;20!UBERON:0001869;6.62e-20;32!UBERON:0001893;6.91e-20;34!UBERON:0002791;8.98e-20;32!UBERON:0003528;1.34e-19;34!UBERON:0002020;1.34e-19;34!UBERON:0000956;2.02e-19;25!UBERON:0000203;2.02e-19;25!UBERON:0002780;7.19e-19;41!UBERON:0001890;7.19e-19;41!UBERON:0000073;2.31e-17;53!UBERON:0002616;2.31e-17;53!UBERON:0001017;1.04e-11;75!UBERON:0000955;3.25e-11;68!UBERON:0001016;5.76e-11;83!UBERON:0007023;2.32e-08;114!UBERON:0000200;2.57e-08;6!UBERON:0002021;1.42e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.15e-36,56;UBERON:0005068,4.15e-36,56;UBERON:0006241,4.15e-36,56;UBERON:0007135,4.15e-36,56;UBERON:0000073,3.52e-33,53;UBERON:0002616,3.52e-33,53;UBERON:0007023,8.78e-30,114;UBERON:0001017,2.73e-29,81;UBERON:0002780,7.71e-29,41;UBERON:0001890,7.71e-29,41;UBERON:0003080,7.71e-29,41;UBERON:0006240,7.71e-29,41;UBERON:0000955,1.89e-26,68;UBERON:0006238,1.89e-26,68;UBERON:0001016,7.90e-26,89;UBERON:0001893,1.75e-25,34;UBERON:0003528,3.77e-25,34;UBERON:0002020,3.77e-25,34;UBERON:0002619,2.79e-24,22;UBERON:0003075,5.21e-24,82;UBERON:0007284,5.21e-24,82;UBERON:0001869,1.52e-23,32;UBERON:0002791,2.19e-23,32;UBERON:0001950,1.99e-22,20;UBERON:0002346,3.91e-22,86;UBERON:0000956,1.54e-20,25;UBERON:0000203,1.54e-20,25;UBERON:0010371,2.66e-18,104;UBERON:0003056,9.98e-18,61;UBERON:0010314,1.72e-15,132;UBERON:0004121,1.65e-14,171;UBERON:0000924,1.65e-14,171;UBERON:0006601,1.65e-14,171;UBERON:0011216,8.51e-12,223;UBERON:0000200,7.71e-09,6;UBERON:0000025,1.42e-08,192;UBERON:0003076,1.86e-08,15;UBERON:0003057,1.86e-08,15;UBERON:0002021,1.23e-07,5;UBERON:0004111,3.28e-07,240;UBERON:0001872,4.28e-07,5 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.704772020479856,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0.331397375727916,2.6893005858071,0.602694528023977,0.730310090387373,1.46379839637152,0.123121058076788,0.204000691244253,0.626909442956176,0.85870796139317,0.547497700291537,0.251085279189606,0.687720651731561,0.492603536699674,0.393553906568396,0,1.91914699048606,0.309632246632152,0.919421224478927,0,0.369754010166788,1.54934401160603,1.13735385989937,1.17440175733939,1.66198622559563,0.401088894940283,1.08505435357926,0.223915474239924,0,0.257575567634187,0.726991193897824,0,0.242584061187816,0.464858073811369,0,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0,0.545812300115692,0.224723484445085,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,1.21079900526674,0.736555271975129,0.316462387440884,0,0.637812899895131,0,0.44931452458598,0.901061357049038,0.803627933485401,0,0.19891667719909,0,1.75996244461323,0.546138611262131,1.77901850772711,1.70692089026603,0.800791974072025,1.72425731986345,1.32208974556972,0,1.1384259382189,2.34894875748376,1.14681968437569,1.32171328579026,2.24203425192614,1.58030450865046,0.590129310341499,1.17903228824749,0.205601498999509,0.334372990781356,0.651844533267181,0.473447805734733,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0.25618263945135,0.390178042679635,0.328875809207352,0,0,0.296573126324121,0.802622484269139,0,0.339928028092699,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0,0,0,0.434539556882471,0.795285947051099,1.45990461090791,0.378139268656271,0.665188192387692,0.614843499851882,1.44076983047484,0,0,0.324547393654683,0,0,1.43094374583205,1.14398982156026,1.11437250398869,0.198762407366705,0,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,0,0.66944122552934,0,0,0.24406205754817,0,0,0.892997282840798,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.794455084879313,0.860509862246441,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.653847612453835,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,2.37600571456411,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,1.03056216018252,0.37223371266318,0.337552664482532,0.584622030967192,1.26216887122057,0.276149695926898,0.484938170456436,0.355009592516614,0.403008392910561,0.508681776931463,0,0.545492241181669,0.573609190778008,1.21973706129595,0.530119073285941,1.16193942869518,0.932949495138334,0,1.45990943630332,1.56449532329816,0,0,0,0,0.828147600278907,0.505754070234305,0.482022059766964,0.992645754591546,0,0.71181185733329,0.269662616320329,0.588664395376038,0,0.738155454624648,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0.882926198829301,0.491953754172454,1.02940686179115,0.439001141634502,0,0,0,0,0,0,0.34779121492523,0,0.433099343283221,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,1.00789276919316,0.425325291727159,0.53735113621709,0.581267877027924,1.15014803749563,1.47798971368783,0.352193736052904,0,0.720599767084807,0.6312121671319,0.253991577168676,0,0,0,0.308482478109971,0,0.571652865261156,0,0.43596006883328,0,0.646358578788889,0,0,1.86156681609409,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,1.01346914667305,1.02738161275192,0.358121926479791,0.560425719967636,0.788123040807709,1.07813787429759,1.66845947163673,1.01637849688985,1.30139853857622,0,0.167516265334349,1.27587750330633,0.749007023947182,0,0,0.36807447515742,0,0,0.415941723061614,1.42743191037729,0.788512075169673,1.05427273493442,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.82707210449155,0,0.533637789017222,0,0,0,2.48107807818777,0.61384789315225,0.561320188866147,1.40953064181271,3.07024349440022,0.804269605718038,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0.232420756919918,0.725156697549733,0.200506470303285,0.184161977871793,0.114814448164607,0.728364672026868,0.262248829918848,0,0.616122696835318,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0.656029291399411,0,1.13345112812495,1.28197250745681,1.98022799809411,0,0.650060246036521,0,0.386682873168488,0.308097234229289,0,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0.330569830721956,0,0.510450849978337,0.50578890427775,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0.0982490410131212,0.7133421029625,0,1.05553817648832,0.329294892959902,0,0,0,0,0,1.12972560932135,0,0,0,0,0.507447609232169,0,0.569647187174163,1.19115887728894,0,0,0.540031437238115,0,0.534120355637366,0,0.490080431962063,0.743212700502875,0.28853842595289,0.284567373393656,0.478278818186467,0.199579371432817,0.383010740264733,0.846694330895531,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0.687010689511529,0.614481528616916,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0,0.99921590399346,1.4098700508785,1.8714054040822,0.879049075631364,0.121360521749513,0.557216921387392,0,2.62618933211459,0.296964680832639,0.614321404198464,2.98244294329889,1.54736358051564,2.11486539543521,0.329607748453519,1.05562704063997,1.19548792950642,1.65770349318689,0.503865495708552,0.511343412510774,0.369254416383208,0.933118762985422,0.269605053441981,0,0,0.986434056369336,0,0,3.87733098438087,1.20598527610407,1.99613798001194,0.7812832832557,1.48681999993533,0,0.1137934482855,1.27126825146383,0.472775363535873,0.344743373241465,0.583209226766509,0.347249989866585,0.885741385813839,0.964771509003264,3.05163472634166,1.87984741883082,2.95547618953547,1.09692698576986,0.435753854075961,0.41827123283581,0.846452843541768,0.569710279235006,0.23056390438806,0.807818799687949,0.869178975376065,3.82801391678303,0.274792780205587,3.19820865611181,0,0.156980256395025,0.332423363800313,0,0,0.503464760927528,0.189753732724185,0,1.47698645169619,0.163232808159148,0.141353071433941,0.216388639742091,1.99052386215701,0.796118080530053,0,0.593042257361244,0.494255755786011,0.208843899010911,1.41542379259422,0.802577647298789,1.87411556580271,0.364909578431332,0.391329237864179,0.728341138602278,1.57833761139756,1.20990716048664,1.53036380815245,1.0741718536843,2.25485129121739,0.103688191397247,1.32930774541437,0.661983911750998,0.627865836814451,0,1.99226682220855,0.277349346026277,0.173559738335131,0.391969589657511,0.783532859223623,1.57254001417827,0.343972064943233,0.967563312890852,0.803982487948041,0.492692742319255,0.290967049465258,0.176512253383001,0.90392296312213,0.137041924646751,0.596143835108969,2.59574263419103,1.56441106187842,0.881747022766871,0.213452994739353,0.999048047910651,0,0.229073192331831,0.857974989309823,0.14405479798815,0.372757606696298,0,0.815425236441684,0.523014231561666,0.815985741090574,0.288950589901519,2.40168115483916,1.36905378891993,0,0.859530882839914,0.262887354279314,1.39641200636127,0.458320848023367,0,1.19807400299395,0.429226048136571,1.11585728720936,0.873385142327441,1.08089965062721,2.32991899054908,0.86661500537946,0.906574442192831,0.876246070104404,0.688992370603241,0.592713324460491,3.18091875923721,1.0896272488926,0.643012593860077,0.275078873194468,0.83088067605837,0.2249738915515,0,1.94398581305679,0.335434687599266,2.36417121897595,0.734364233889974,0.844802692155252,0,0.575745591958336,2.1440859791201,0,0.25426853765475,0.542999601753713,0,0,0,0.574647645245373,0.340776043570843,0.339936274560377,1.17241786942466,0,1.68067843270016,1.3223260174269,0.513260513652988,0.704815022316672,0.533937062838473,0.628817220398664,1.24271716604159,0.496166021811951,0.197611631897944,1.21792598380896,1.91502377331055,0.544017803369474,1.7548292581589,2.14441903734423,1.31149052283922,1.25643277000187,4.43034089983493,3.17268288745104,2.50381861413,1.72022758707021,0.887432412294818,1.4903136705932,0.276697269872462,0.624902039810533,0.606596470166591,0,0,0,0.434763085832475,0.149254802886874,0.233713309847224,0,0.947015026375446,0,0,0.686520205190771,0.453692771289717,0.777186002913902,0.443565449968902,0.477890301491107,0,0,0,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0.813741466409323,0.545545977607678,0.107410557042488,0.928067519756987,0.796191777397232,0,0.343395705182793,0.673498977531838,0,0.385239660814607,0.857766365499703,0.260994291965212,0,0.231522474323834,0,1.07453304648892,0,0.877136198314828,0.176689145945881,0.771656153083659,0.506827321959218,0.512483037175893,0,0.303859956177382,1.65910123382077,0,0.531459361253452,0,0.982829546539238,1.72041036127604,0.211312123358627,0.19998739585493,0.106691729694141,0.172214979660816,0.567515953566836,0.736423801007363,0.139879507719444,0,0.255788742607303,0.539124056983409,0.786329709279482,0.54604819096007,0,0.425149840203366,0.495743057036009,0,0.318004350653419,0.94634094001504,0,1.05802783107205,0.3062454773532,1.66995985250795,4.25089728976755,1.59633859057151,3.07674546361133,3.27693205088234,2.07471757392654,2.26065903884592,1.42769420259154,1.07962490351128,0.943757786781923,0.550285795565037,0,0.762764190934334,0,0.596748666348824,1.12815492523886,1.41193548092464,0.781514011233092,0.523813388962845,0.327543835020193,0.295712172434091,3.37687923091973,2.34323429584154,2.27355476151302,1.96589011601111,1.64092442705466,2.74128883428591,0.992422356778588,0.527613733078862,0.255524855279191,0.535701835878287,3.36283722218824,1.82089681270989,1.36597314810779,0.709618961301111,0.691403925334676,0.685952037749674,1.76721305739762,1.90741043332262,0.827356886187777,0.778619813244484,0.941917114206168,1.57115589916002,0.560544326627578,1.82631744101899,1.07963795609311,0.9555033757741,0.714765441766563,0.47404083519818,0.697448552208751,0,0,0.62164849248911,0.17071847709395,2.07377898544228,0.430227358820278,0.591660003652827,0.511280428554946,1.27016115057279,0.9164274741762,1.24082554265728,1.91107787795487,0.447421727191169,0.883352102537187,0.487671699929078,0.647428837187895,0.307988420568741,0,0.971421986118279,0.233939463462106,0.397901550322736,0.237840181555137,0.67767649223376,1.09940516745429,1.35866559210006,1.85217979459067,1.5299169235277,0.470317296361523,1.71603825227734,0.707029641304878,2.1593931382644,1.78227840196252,1.2679671827502,0.339854229375634,0.657887425858975,0.322289439867886,0.89947040332436,0.178553938605658,1.05868461514708,0.962896400270019,0,1.37618785021362,2.00675416412032,0.473314686579554,0.951880862672806,2.61810414204226,0,0.371995018166751,0.462175628631418,0,0.378499274505237,0.874124575709564,1.0135880080915,0.305966489225945,0.534434810531121,0.36757959813938,0.250707539292375,0.378893491091197,0.803892390468535,3.31667775783512,0.930896962757057,1.0661699095049,2.14257988317366,0.322944549180031,0.931120714437869,1.00918676322552,0.636471582781649,3.23387502333151,0.653150243690884,1.02669990325584,0.80822463617505,1.00411087549747,1.33064142618405,0.89543595472072,0.853818767021724,0,0.269475606319761,4.69281884806909,0.611207220914332,0.406896178315738,0,0.402547587182052,0.320568492303233 | |||
|short_description=p2@SLC35A3 | |||
}} |
Revision as of 19:46, 10 January 2014
Short description: | p2@SLC35A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC35A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_NM_012243, uc001dsp.1, uc001dsq.1, uc009wdy.1_5end |
EntrezGene: | SLC35A3 |
HGNC: | 11023 |
UniProt: | Q9Y2D2Q9BSB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data