FFCP PHASE1:Hg19::chr1:45471462..45471466,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=79654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26117 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-202bp_to_ENST00000486132,uc001cmx.3_5end | |||
|coexpression_cluster_id=C1002 | |||
|description=CAGE_peak_2_at_HECTD3_5end | |||
|id=chr1:45471462..45471466,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.15e-13;1!CL:0002625;8.15e-13;1!CL:0000222;8.15e-13;1!CL:0000216;8.15e-13;1!CL:0002601;8.15e-13;1!CL:0000764;4.83e-07;2!CL:0002575;4.83e-07;2!CL:0000558;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.06e-13,1;CL:0002625,6.06e-13,1;CL:0000216,6.06e-13,1;CL:0002601,9.73e-13,1;CL:0000764,4.69e-07,2;CL:0000765,4.69e-07,2;CL:0000050,4.69e-07,2;CL:0000038,4.69e-07,2;CL:0000558,4.69e-07,2;CL:0000547,4.69e-07,2;CL:0000549,4.69e-07,2;CL:0000550,4.69e-07,2;CL:0000552,4.69e-07,2;CL:0002575,5.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-49;15!UBERON:0000179;1.01e-49;15!UBERON:0000463;1.01e-49;15!UBERON:0002390;3.46e-21;32!UBERON:0001136;8.15e-13;1!UBERON:0001343;8.15e-13;1!UBERON:0004910;8.15e-13;1!UBERON:0004813;8.15e-13;1!UBERON:0002193;1.36e-11;42!UBERON:0004909;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.01e-49,15;UBERON:0000179,1.01e-49,15;UBERON:0000463,1.01e-49,15;UBERON:0001136,6.06e-13,1;UBERON:0001343,6.06e-13,1;UBERON:0004910,6.06e-13,1;UBERON:0005154,6.06e-13,1;UBERON:0005295,6.06e-13,1;UBERON:0004813,6.06e-13,1;UBERON:0005297,6.06e-13,1;UBERON:0005294,6.06e-13,1;UBERON:0010141,6.06e-13,1;UBERON:0005891,6.06e-13,1;UBERON:0004535,9.71e-08,109;UBERON:0001009,1.68e-07,112;UBERON:0007023,2.44e-07,114;UBERON:0004909,4.17e-07,2;UBERON:0002390,7.90e-07,98;UBERON:0003061,7.90e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.495065411840187,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0.795285947051099,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0.275118041940067,0,0.516833518338658,0,0,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0.622422070799533,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0.340296549480063,0.179389635688862,0.213557388818567,0,0,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.368199594569197,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0,0.651616610620649,0,1.44331342025273,0.579652024875384,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,7.15312891703765,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.195801157462741,1.02943027143257,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.328508624055237,0,0,0,0,0,0,0.182091168006717,0,0.451199612907412,0.231046011313244,2.35304930753057,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.657779629937804,1.3071772551245,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.154048617114644,0,0,0,0,0,0.267096106940212,0,0,0,0.10115778085555,0,0,2.0911118104818,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,1.06428319221179,0,0.658589785919804,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,9.64150457541122,3.82318603571188,0,3.81170840732462,4.52498500394814,4.53931317834902,3.7802200606668,3.96562588147135,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0.37950746544837,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,1.26184898228651,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0.0918948995348449,0,0.227336094654718,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@HECTD3 | |||
}} |
Revision as of 18:19, 10 January 2014
Short description: | p2@HECTD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HECTD3_5end |
Coexpression cluster: | C1002_Mesenchymal_Whole_Smooth_Renal_osteosarcoma_Fibroblast_Reticulocytes |
Association with transcript: | -202bp_to_ENST00000486132, uc001cmx.3_5end |
EntrezGene: | HECTD3 |
HGNC: | 26117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.06e-13 | 1 |
seminiferous tubule epithelial cell | 6.06e-13 | 1 |
Sertoli cell | 6.06e-13 | 1 |
uterine smooth muscle cell | 9.73e-13 | 1 |
erythroid lineage cell | 4.69e-07 | 2 |
erythroblast | 4.69e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.69e-07 | 2 |
erythroid progenitor cell | 4.69e-07 | 2 |
reticulocyte | 4.69e-07 | 2 |
proerythroblast | 4.69e-07 | 2 |
basophilic erythroblast | 4.69e-07 | 2 |
polychromatophilic erythroblast | 4.69e-07 | 2 |
orthochromatic erythroblast | 4.69e-07 | 2 |
central nervous system pericyte | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.01e-49 | 15 |
haemolymphatic fluid | 1.01e-49 | 15 |
organism substance | 1.01e-49 | 15 |
mesothelium | 6.06e-13 | 1 |
seminiferous tubule of testis | 6.06e-13 | 1 |
epithelium of male gonad | 6.06e-13 | 1 |
epithelial cord | 6.06e-13 | 1 |
sex cord | 6.06e-13 | 1 |
seminiferous tubule epithelium | 6.06e-13 | 1 |
testis sex cord | 6.06e-13 | 1 |
genital ridge | 6.06e-13 | 1 |
primitive sex cord of indifferent gonad | 6.06e-13 | 1 |
coelomic epithelium | 6.06e-13 | 1 |
cardiovascular system | 9.71e-08 | 109 |
circulatory system | 1.68e-07 | 112 |
adult organism | 2.44e-07 | 114 |
epithelium of gonad | 4.17e-07 | 2 |
hematopoietic system | 7.90e-07 | 98 |
blood island | 7.90e-07 | 98 |