FFCP PHASE1:Hg19::chr1:44870919..44870936,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55182 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25552 | |||
|TSSclassifier=strong | |||
|UniProt=E7EP36 | |||
|association_with_transcript=0bp_to_ENST00000416840_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_RNF220_5end | |||
|id=chr1:44870919..44870936,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-12;82 | |||
|ontology_enrichment_disease=DOID:305!1.05e-08!106;DOID:0050687!1.53e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.76e-39!82;UBERON:0005743!2.26e-37!86;UBERON:0001049!5.74e-37!57;UBERON:0005068!5.74e-37!57;UBERON:0006241!5.74e-37!57;UBERON:0007135!5.74e-37!57;UBERON:0000955!1.66e-33!69;UBERON:0006238!1.66e-33!69;UBERON:0000073!5.48e-33!94;UBERON:0001016!5.48e-33!94;UBERON:0002616!2.03e-30!59;UBERON:0003080!1.55e-29!42;UBERON:0002780!2.55e-29!41;UBERON:0001890!2.55e-29!41;UBERON:0006240!2.55e-29!41;UBERON:0002020!8.19e-27!34;UBERON:0003528!8.19e-27!34;UBERON:0001893!9.96e-27!34;UBERON:0002791!5.64e-26!33;UBERON:0002346!9.10e-26!90;UBERON:0003075!1.32e-25!86;UBERON:0007284!1.32e-25!86;UBERON:0001869!5.71e-25!32;UBERON:0007023!1.27e-22!115;UBERON:0000153!1.84e-20!129;UBERON:0007811!1.84e-20!129;UBERON:0000924!2.63e-20!173;UBERON:0006601!2.63e-20!173;UBERON:0000033!4.71e-20!123;UBERON:0004121!6.91e-20!169;UBERON:0000956!1.41e-19!25;UBERON:0000203!1.41e-19!25;UBERON:0003056!6.02e-19!61;UBERON:0002619!8.73e-18!22;UBERON:0001950!2.86e-16!20;UBERON:0000025!7.38e-09!194;UBERON:0002308!1.12e-08!9;UBERON:0000125!1.12e-08!9;UBERON:0003076!1.40e-08!15;UBERON:0003057!1.40e-08!15;UBERON:0002420!1.89e-08!9;UBERON:0007245!1.89e-08!9;UBERON:0010009!1.89e-08!9;UBERON:0010011!1.89e-08!9;UBERON:0000454!1.89e-08!9;UBERON:0000477!1.65e-07!286;UBERON:0002298!1.65e-07!8;UBERON:0004111!3.10e-07!241;UBERON:0001871!4.10e-07!7;UBERON:0004732!4.58e-07!13;UBERON:0009663!5.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.12e-37;34!UBERON:0003528;3.14e-37;34!UBERON:0002020;3.14e-37;34!UBERON:0002791;6.12e-37;32!UBERON:0001869;8.85e-37;32!UBERON:0002780;9.57e-35;41!UBERON:0001890;9.57e-35;41!UBERON:0000956;1.60e-31;25!UBERON:0000203;1.60e-31;25!UBERON:0000073;2.10e-31;53!UBERON:0002616;2.10e-31;53!UBERON:0002619;1.54e-28;22!UBERON:0001950;5.19e-26;20!UBERON:0001017;4.41e-24;75!UBERON:0000955;5.12e-24;68!UBERON:0001016;2.09e-20;83!UBERON:0000125;2.21e-13;9!UBERON:0002308;2.21e-13;9!UBERON:0002420;5.25e-13;9!UBERON:0007245;5.25e-13;9!UBERON:0010009;5.25e-13;9!UBERON:0010011;5.25e-13;9!UBERON:0000454;5.25e-13;9!UBERON:0009663;1.29e-10;7!UBERON:0004732;2.17e-10;13!UBERON:0002298;8.73e-10;6!UBERON:0001871;1.68e-09;6!UBERON:0004733;4.30e-09;12!UBERON:0002028;4.30e-09;12!UBERON:0000200;4.81e-09;6!UBERON:0007023;5.43e-08;114!UBERON:0000349;9.39e-08;5!UBERON:0001872;9.46e-08;5!UBERON:0011216;2.01e-07;132!UBERON:0002021;3.19e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.62e-60,81;UBERON:0001049,2.84e-60,56;UBERON:0005068,2.84e-60,56;UBERON:0006241,2.84e-60,56;UBERON:0007135,2.84e-60,56;UBERON:0000073,6.18e-56,53;UBERON:0002616,6.18e-56,53;UBERON:0001016,3.07e-54,89;UBERON:0000955,6.72e-53,68;UBERON:0006238,6.72e-53,68;UBERON:0002780,2.57e-48,41;UBERON:0001890,2.57e-48,41;UBERON:0003080,2.57e-48,41;UBERON:0006240,2.57e-48,41;UBERON:0003528,1.34e-43,34;UBERON:0002020,1.34e-43,34;UBERON:0001893,1.86e-43,34;UBERON:0003075,4.17e-43,82;UBERON:0007284,4.17e-43,82;UBERON:0002346,8.75e-42,86;UBERON:0002791,9.78e-41,32;UBERON:0001869,1.61e-40,32;UBERON:0010371,1.43e-34,104;UBERON:0003056,5.92e-33,61;UBERON:0000956,1.62e-31,25;UBERON:0000203,1.62e-31,25;UBERON:0002619,1.57e-28,22;UBERON:0004121,5.64e-28,171;UBERON:0000924,5.64e-28,171;UBERON:0006601,5.64e-28,171;UBERON:0001950,5.30e-26,20;UBERON:0011216,4.18e-23,223;UBERON:0010314,2.88e-22,132;UBERON:0007023,1.43e-20,114;UBERON:0000025,9.84e-15,192;UBERON:0000125,2.23e-13,9;UBERON:0002308,2.23e-13,9;UBERON:0002420,5.31e-13,9;UBERON:0007245,5.31e-13,9;UBERON:0010009,5.31e-13,9;UBERON:0010011,5.31e-13,9;UBERON:0000454,5.31e-13,9;UBERON:0003076,7.06e-13,15;UBERON:0003057,7.06e-13,15;UBERON:0009663,1.30e-10,7;UBERON:0004732,2.18e-10,13;UBERON:0004111,6.74e-10,240;UBERON:0002298,8.72e-10,6;UBERON:0001871,1.81e-09,6;UBERON:0004733,4.30e-09,12;UBERON:0002028,4.30e-09,12;UBERON:0007277,4.30e-09,12;UBERON:0000200,4.81e-09,6;UBERON:0000349,9.44e-08,5;UBERON:0001872,9.57e-08,5;UBERON:0002021,2.98e-07,5;UBERON:0000483,9.66e-07,306 | |||
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| |||
|short_description=p2@RNF220 | |||
}} |
Revision as of 18:16, 10 January 2014
Short description: | p2@RNF220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF220_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000416840_5end |
EntrezGene: | RNF220 |
HGNC: | 25552 |
UniProt: | E7EP36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data