FFCP PHASE1:Hg19::chr1:37499986..37499997,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2899 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4581 | |||
|TSSclassifier=strong | |||
|UniProt=A9Z1Z8,Q13003 | |||
|association_with_transcript=-142bp_to_NM_000831,uc001caz.2,uc001cba.1_5end | |||
|description=CAGE_peak_4_at_GRIK3_5end | |||
|id=chr1:37499986..37499997,- | |||
|ontology_enrichment_celltype=CL:0000242!5.23e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.48e-12;2!CL:0000123;2.45e-12;2!CL:0000242;2.45e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.59e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!5.03e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3193;2.45e-12;2!DOID:962;2.45e-12;2!DOID:171;8.83e-10;10!DOID:3095;1.14e-09;22!DOID:2994;1.14e-09;22!DOID:1192;1.17e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.85e-12,2;DOID:962,1.85e-12,2;DOID:171,8.84e-10,10;DOID:3095,1.27e-09,22;DOID:2994,1.27e-09,22;DOID:1192,9.66e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.67e-53!57;UBERON:0005068!2.67e-53!57;UBERON:0006241!2.67e-53!57;UBERON:0007135!2.67e-53!57;UBERON:0002616!3.54e-45!59;UBERON:0000073!3.55e-45!94;UBERON:0001016!3.55e-45!94;UBERON:0001017!3.48e-43!82;UBERON:0005743!3.81e-43!86;UBERON:0002780!2.58e-42!41;UBERON:0001890!2.58e-42!41;UBERON:0006240!2.58e-42!41;UBERON:0000955!6.58e-42!69;UBERON:0006238!6.58e-42!69;UBERON:0003080!3.78e-41!42;UBERON:0001893!5.27e-37!34;UBERON:0002346!1.03e-36!90;UBERON:0002020!1.51e-36!34;UBERON:0003528!1.51e-36!34;UBERON:0003075!1.82e-36!86;UBERON:0007284!1.82e-36!86;UBERON:0002791!9.60e-35!33;UBERON:0001869!7.83e-33!32;UBERON:0002619!3.77e-32!22;UBERON:0007023!7.02e-32!115;UBERON:0001950!2.24e-31!20;UBERON:0003056!1.87e-28!61;UBERON:0000956!6.74e-28!25;UBERON:0000203!6.74e-28!25;UBERON:0000924!2.50e-26!173;UBERON:0006601!2.50e-26!173;UBERON:0004121!1.02e-25!169;UBERON:0000033!1.29e-25!123;UBERON:0000153!5.92e-24!129;UBERON:0007811!5.92e-24!129;UBERON:0000025!2.16e-13!194;UBERON:0003076!6.89e-13!15;UBERON:0003057!6.89e-13!15;UBERON:0001871!3.70e-12!7;UBERON:0000200!5.95e-12!6;UBERON:0002298!2.89e-11!8;UBERON:0004111!2.55e-10!241;UBERON:0004733!4.95e-10!12;UBERON:0002028!4.95e-10!12;UBERON:0007277!4.95e-10!12;UBERON:0002308!5.32e-10!9;UBERON:0000125!5.32e-10!9;UBERON:0001872!9.07e-10!5;UBERON:0002021!2.11e-09!5;UBERON:0004732!3.51e-09!13;UBERON:0002771!5.35e-09!3;UBERON:0000064!1.32e-08!219;UBERON:0000988!1.82e-08!3;UBERON:0000477!2.05e-08!286;UBERON:0006331!3.34e-08!3;UBERON:0000475!1.89e-07!365;UBERON:0002420!2.76e-07!9;UBERON:0007245!2.76e-07!9;UBERON:0010009!2.76e-07!9;UBERON:0010011!2.76e-07!9;UBERON:0000454!2.76e-07!9;UBERON:0002680!3.01e-07!9;UBERON:0001895!3.01e-07!9;UBERON:0010092!3.01e-07!9;UBERON:0000483!4.62e-07!309;UBERON:0000119!6.72e-07!312;UBERON:0001894!9.92e-07!7;UBERON:0006222!9.92e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002581;2.93e-23;1!UBERON:0002022;2.93e-23;1!UBERON:0001872;1.48e-18;5!UBERON:0003714;2.45e-12;2!UBERON:0001950;4.24e-10;20!UBERON:0002619;2.82e-09;22!UBERON:0000956;2.82e-08;25!UBERON:0000203;2.82e-08;25!UBERON:0001052;8.37e-07;4!UBERON:0002346;8.37e-07;4!UBERON:0000923;8.37e-07;4!UBERON:0010316;8.37e-07;4!UBERON:0005291;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002581,2.62e-23,1;UBERON:0002022,4.10e-23,1;UBERON:0001872,1.24e-18,5;UBERON:0003714,1.85e-12,2;UBERON:0001950,4.17e-10,20;UBERON:0002619,2.78e-09,22;UBERON:0000956,2.79e-08,25;UBERON:0000203,2.79e-08,25;UBERON:0001052,6.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0.868124974666461,0,0,0,0.110579259931225,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,1.03274246318642,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.366078794705889,0.500763722825999,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0.468334905806882,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.646948868380091,0,0,1.01839517972415,0,0,1.67593475391973,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.82046545696302,0.504143392443436,0.691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.570742291745161,1.64092442705466,0,0.496211178389294,0,0,0.535701835878287,0,0,0.91064876540519,0,0,0,0.40781839786099,1.24968269769413,0,0,0,0.157115589916002,0,1.82631744101899,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0.33883824611688,0.439762066981716,0.905777061400041,0.231522474323834,0.218559560503957,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0.788857810965923,0.883889372481891,0,0,0,0,0,0,0.109265571963696,0,0,0,1.01084389488329,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@GRIK3 | |||
}} |
Revision as of 17:53, 10 January 2014
Short description: | p4@GRIK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRIK3_5end |
Coexpression cluster: | NA |
Association with transcript: | -142bp_to_NM_000831, uc001caz.2, uc001cba.1_5end |
EntrezGene: | GRIK3 |
HGNC: | 4581 |
UniProt: | A9Z1Z8Q13003 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.59e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
postcentral gyrus | 2.62e-23 | 1 |
insula | 4.10e-23 | 1 |
parietal lobe | 1.24e-18 | 5 |
neural tissue | 1.85e-12 | 2 |
neocortex | 4.17e-10 | 20 |
regional part of cerebral cortex | 2.78e-09 | 22 |
cerebral cortex | 2.79e-08 | 25 |
pallium | 2.79e-08 | 25 |
rectum | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.85e-12 | 2 |
neurofibroma | 1.85e-12 | 2 |
neuroectodermal tumor | 8.84e-10 | 10 |
germ cell and embryonal cancer | 1.27e-09 | 22 |
germ cell cancer | 1.27e-09 | 22 |
peripheral nervous system neoplasm | 9.66e-09 | 3 |