FFCP PHASE1:Hg19::chr1:36948025..36948047,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2439 | |||
|TSSclassifier=weak | |||
|UniProt=E9PK56 | |||
|association_with_transcript=-373bp_to_ENST00000533491_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_CSF3R_5end | |||
|id=chr1:36948025..36948047,- | |||
|ontology_enrichment_celltype=CL:0002057!6.76e-53!42;CL:0000860!2.07e-48!45;CL:0000766!3.00e-48!76;CL:0002009!1.02e-41!65;CL:0002194!1.91e-41!63;CL:0000576!1.91e-41!63;CL:0000040!1.91e-41!63;CL:0000559!1.91e-41!63;CL:0000557!5.98e-39!71;CL:0000839!8.42e-36!70;CL:0000763!2.33e-32!112;CL:0000049!2.33e-32!112;CL:0000738!1.95e-31!140;CL:0000988!4.42e-25!182;CL:0000037!9.41e-25!172;CL:0000566!9.41e-25!172;CL:0002087!3.98e-24!119;CL:0002032!2.11e-21!165;CL:0000837!2.11e-21!165;CL:0002031!1.93e-20!124;CL:0000094!1.18e-13!8;CL:0000081!1.40e-11!11;CL:0002393!5.43e-10!9;CL:0002397!5.43e-10!9;CL:0000080!5.26e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-29;33!CL:0002057;1.92e-29;33!CL:0000473;3.55e-21;39!CL:0000234;3.55e-21;39!CL:0000576;1.24e-19;48!CL:0000775;2.95e-18;3!CL:0000094;3.65e-18;8!CL:0000784;1.94e-17;3!CL:0000766;1.94e-14;69!CL:0000081;3.87e-13;11!CL:0000771;1.02e-12;2!CL:0000763;9.74e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.74e-34,72;CL:0000860,1.08e-32,42;CL:0002057,1.08e-32,42;CL:0000473,3.79e-28,48;CL:0000234,3.79e-28,48;CL:0002194,1.02e-24,59;CL:0000576,1.02e-24,59;CL:0000040,1.02e-24,59;CL:0000559,1.02e-24,59;CL:0000557,5.48e-24,67;CL:0002009,8.50e-24,61;CL:0000763,1.95e-23,108;CL:0000049,1.95e-23,108;CL:0000839,9.90e-22,66;CL:0000738,1.90e-19,136;CL:0000775,2.96e-18,3;CL:0000094,3.66e-18,8;CL:0000784,2.00e-17,3;CL:0000037,3.32e-16,168;CL:0000988,4.16e-15,177;CL:0002032,4.38e-14,161;CL:0000837,4.38e-14,161;CL:0000081,3.87e-13,11;CL:0000771,1.02e-12,2;CL:0002087,6.21e-11,115;CL:0002031,2.51e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;5.88e-22;42!CL:0000049;6.78e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.31e-51!102;UBERON:0003061!6.31e-51!102;UBERON:0002193!1.27e-47!112;UBERON:0002371!8.15e-33!80;UBERON:0001474!1.89e-29!86;UBERON:0002405!1.45e-25!115;UBERON:0004765!6.12e-24!101;UBERON:0001434!6.12e-24!101;UBERON:0000178!6.26e-19!15;UBERON:0000179!6.26e-19!15;UBERON:0000463!6.26e-19!15;UBERON:0003081!2.60e-16!216;UBERON:0007023!4.14e-13!115;UBERON:0002204!1.65e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.19e-23;15!UBERON:0000179;5.19e-23;15!UBERON:0000463;5.19e-23;15!UBERON:0002390;3.26e-12;32!UBERON:0002193;3.31e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.43e-34,98;UBERON:0003061,3.43e-34,98;UBERON:0002193,1.54e-30,108;UBERON:0000178,5.44e-23,15;UBERON:0000179,5.44e-23,15;UBERON:0000463,5.44e-23,15;UBERON:0002371,1.05e-20,76;UBERON:0001474,6.55e-19,82;UBERON:0004765,6.89e-17,90;UBERON:0002405,3.21e-16,93;UBERON:0003081,5.75e-15,203;UBERON:0001434,8.18e-15,100;UBERON:0000926,1.31e-07,315;UBERON:0004120,1.31e-07,315;UBERON:0006603,1.31e-07,315;UBERON:0002204,2.49e-07,167 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.651032612147555,0,0.971680998056939,0.77272670290256,0.581592955118259,0,1.94067248950253,0.464858073811369,2.46700732813095,0.619412741790207,0.575384784644301,0.512321413058201,1.6553756092201,1.03423704220986,0.645484683583826,2.70852973188684,0.752969358170419,0.545812300115692,0.898893937780338,1.53041946185451,0.641858054152187,1.91801137739712,1.64925650093358,0.997318288108159,0.852449501065388,1.16083695451434,1.13477044938228,0.622822248995575,0.75374599577023,1.0429658368404,1.52032191293582,1.21079900526674,0.368277635987565,3.16462387440884,1.69004229049553,0.850417199860174,0.209658645508376,0.561643155732475,1.35159203557356,0.48217676009124,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,4.76981248610684,6.86393892936153,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7251755986796,23.932916736322,31.9099945345747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,7.10426652925037,6.88173486428138,2.27858874869665,7.14695326373367,6.17043409629291,4.53931317834902,7.02040868409549,6.34500141035416,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.448788222048861,0.108647371922008,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0.296521128680622,0.370691816839509,0.208843899010911,0.471807930864739,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.449947783103001,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.314408610199332,0.828478110694391,0,0,0.121792598380896,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.250381861413,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0.271878931907327,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0.310298987585686,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p6@CSF3R | |||
}} |
Revision as of 17:52, 10 January 2014
Short description: | p6@CSF3R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSF3R_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -373bp_to_ENST00000533491_5end |
EntrezGene: | CSF3R |
HGNC: | 2439 |
UniProt: | E9PK56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.74e-34 | 72 |
classical monocyte | 1.08e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-32 | 42 |
defensive cell | 3.79e-28 | 48 |
phagocyte | 3.79e-28 | 48 |
monopoietic cell | 1.02e-24 | 59 |
monocyte | 1.02e-24 | 59 |
monoblast | 1.02e-24 | 59 |
promonocyte | 1.02e-24 | 59 |
granulocyte monocyte progenitor cell | 5.48e-24 | 67 |
macrophage dendritic cell progenitor | 8.50e-24 | 61 |
myeloid cell | 1.95e-23 | 108 |
common myeloid progenitor | 1.95e-23 | 108 |
myeloid lineage restricted progenitor cell | 9.90e-22 | 66 |
leukocyte | 1.90e-19 | 136 |
neutrophil | 2.96e-18 | 3 |
granulocyte | 3.66e-18 | 8 |
plasmacytoid dendritic cell | 2.00e-17 | 3 |
hematopoietic stem cell | 3.32e-16 | 168 |
hematopoietic cell | 4.16e-15 | 177 |
hematopoietic oligopotent progenitor cell | 4.38e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.38e-14 | 161 |
blood cell | 3.87e-13 | 11 |
eosinophil | 1.02e-12 | 2 |
nongranular leukocyte | 6.21e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.51e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.43e-34 | 98 |
blood island | 3.43e-34 | 98 |
hemolymphoid system | 1.54e-30 | 108 |
blood | 5.44e-23 | 15 |
haemolymphatic fluid | 5.44e-23 | 15 |
organism substance | 5.44e-23 | 15 |
bone marrow | 1.05e-20 | 76 |
bone element | 6.55e-19 | 82 |
skeletal element | 6.89e-17 | 90 |
immune system | 3.21e-16 | 93 |
lateral plate mesoderm | 5.75e-15 | 203 |
skeletal system | 8.18e-15 | 100 |
mesoderm | 1.31e-07 | 315 |
mesoderm-derived structure | 1.31e-07 | 315 |
presumptive mesoderm | 1.31e-07 | 315 |
musculoskeletal system | 2.49e-07 | 167 |