FFCP PHASE1:Hg19::chr1:6526182..6526189,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11910 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000348333,ENST00000351748,ENST00000414040,ENST00000461703,ENST00000502588,ENST00000502730,ENST00000510563_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_2_at_TNFRSF25_5end | |||
|id=chr1:6526182..6526189,- | |||
|ontology_enrichment_celltype=CL:0000084!4.83e-35!25;CL:0000827!4.83e-35!25;CL:0000791!1.36e-29!18;CL:0000789!1.36e-29!18;CL:0002420!1.36e-29!18;CL:0002419!1.36e-29!18;CL:0000790!1.36e-29!18;CL:0000542!5.52e-29!53;CL:0000051!5.52e-29!53;CL:0000838!1.04e-27!52;CL:0000738!8.74e-24!140;CL:0002087!6.37e-21!119;CL:0000037!7.84e-21!172;CL:0000566!7.84e-21!172;CL:0002032!6.37e-19!165;CL:0000837!6.37e-19!165;CL:0000625!6.47e-19!11;CL:0000988!6.83e-19!182;CL:0002031!4.38e-15!124;CL:0000624!1.69e-14!6;CL:0000898!7.14e-08!3;CL:0000623!7.31e-08!3;CL:0000825!7.31e-08!3;CL:0000842!2.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.60e-38;25!CL:0000791;1.31e-33;18!CL:0000789;1.31e-33;18!CL:0002419;1.31e-33;18!CL:0000624;5.44e-23;6!CL:0000623;2.13e-16;3!CL:0000625;2.27e-16;11!CL:0000542;5.11e-14;53!CL:0000898;2.86e-08;3!CL:0000226;1.23e-07;3!CL:0000842;1.23e-07;3!CL:0000895;6.05e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.18e-38,25;CL:0000827,2.18e-38,25;CL:0000791,7.49e-34,18;CL:0000789,7.49e-34,18;CL:0002420,7.49e-34,18;CL:0002419,7.49e-34,18;CL:0000790,7.49e-34,18;CL:0000838,1.80e-25,52;CL:0000542,6.41e-25,53;CL:0000051,6.41e-25,53;CL:0000624,4.90e-23,6;CL:0000625,1.49e-16,11;CL:0000623,2.19e-16,3;CL:0000825,2.19e-16,3;CL:0002087,1.74e-13,115;CL:0000738,9.53e-11,136;CL:0002031,5.05e-10,120;CL:0000037,6.57e-09,168;CL:0000898,2.67e-08,3;CL:0000988,3.11e-08,177;CL:0000226,1.37e-07,3;CL:0000842,1.37e-07,3;CL:0002032,1.89e-07,161;CL:0000837,1.89e-07,161;CL:0000810,5.90e-07,1;CL:0000895,5.90e-07,1;CL:0002436,5.90e-07,1;CL:0002427,5.90e-07,1;CL:0002428,5.90e-07,1;CL:0002429,5.90e-07,1;CL:0002433,5.90e-07,1;CL:0002431,5.90e-07,1;CL:0002432,5.90e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-33;18!CL:0000051;5.11e-14;53!CL:0002427;6.05e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.21e-07,1;DOID:0060061,8.21e-07,1;DOID:8691,8.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.95e-15!15;UBERON:0000179!3.95e-15!15;UBERON:0000463!3.95e-15!15;UBERON:0004177!3.10e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.46e-08;15!UBERON:0000179;3.46e-08;15!UBERON:0000463;3.46e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.29e-08,15;UBERON:0000179,4.29e-08,15;UBERON:0000463,4.29e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,1.68152568894461,0,5.11445402295966,6.6811829667358,3.90642848099067,0.501559486172034,0.977766799900771,0.946895611469467,1.94826728407911,2.33961959458865,2.65145316727353,2.43687284041983,1.62482318259009,2.17755243533648,1.95089021339817,1.15106533222573,1.93445012450094,2.02862160014537,2.66915813691709,1.07016331235885,3.1360657141493,0.906474741580529,5.3650869104269,4.46715679127419,1.77113784413652,0.95569624297229,0.651083453856419,0.950452044448374,1.95747654801105,1.79181255616186,1.24930726552346,0.710331756132051,0,1.81446068902259,2.13952156626806,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,2.15627574859517,2.69520376187472,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.476463550915578,0.822724546172388,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0.185803175125719,0,0,0,1.59663497146253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,1.15362711958732,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.664846727600626,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0.664324201566815,0.163565394255844,0,0,0,2.79982354196902,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968833647540092,0.682821857254437,0,0,0,0.217716747896961,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@TNFRSF25 | |||
}} |
Revision as of 16:04, 10 January 2014
Short description: | p2@TNFRSF25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF25_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -15bp_to_ENST00000348333, ENST00000351748, ENST00000414040, ENST00000461703, ENST00000502588, ENST00000502730, ENST00000510563_5end |
EntrezGene: | TNFRSF25 |
HGNC: | 11910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 4.29e-08 | 15 |
haemolymphatic fluid | 4.29e-08 | 15 |
organism substance | 4.29e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.21e-07 | 1 |
cutaneous T cell lymphoma | 8.21e-07 | 1 |
mycosis fungoides | 8.21e-07 | 1 |